Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964378 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 57430568 ~ 57430693 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051426.1 | True | 126 | mRNA | 0.42 | 1 | 57430568 | 57430693 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520279 | LOC106586423 | coding | upstream | 24945 | 57335037 ~ 57405623 (+) |
| LOC110520274 | NA | coding | upstream | 200113 | 57220562 ~ 57230455 (+) |
| sema5ba | LOC106586418 | coding | upstream | 325051 | 56917452 ~ 57105517 (+) |
| adcy5 | LOC106586396 | coding | upstream | 612038 | 56683064 ~ 56818530 (+) |
| LOC110520266 | phs1 | coding | upstream | 750001 | 56668133 ~ 56680567 (+) |
| LOC118936397 | NA | coding | downstream | 3452 | 57434145 ~ 57434270 (+) |
| clasp1a | LOC106586426 | coding | downstream | 15450 | 57446143 ~ 57554278 (+) |
| LOC110520283 | LOC106586429 | coding | downstream | 140527 | 57571203 ~ 57589227 (+) |
| ralb | ralb | coding | downstream | 520406 | 57951099 ~ 57969839 (+) |
| LOC118964187 | NA | coding | downstream | 545372 | 57976065 ~ 57978805 (+) |
| G277404 | NA | non-coding | upstream | 14792 | 57414571 ~ 57415776 (+) |
| G277400 | NA | non-coding | upstream | 19093 | 57411173 ~ 57411475 (+) |
| G277346 | NA | non-coding | upstream | 20429 | 57409907 ~ 57410139 (+) |
| G277397 | NA | non-coding | upstream | 30012 | 57400261 ~ 57400556 (+) |
| G277394 | NA | non-coding | upstream | 34502 | 57395857 ~ 57396066 (+) |
| G277352 | NA | non-coding | downstream | 6393 | 57437086 ~ 57439312 (+) |
| G277353 | NA | non-coding | downstream | 10868 | 57441561 ~ 57442509 (+) |
| G277441 | NA | non-coding | downstream | 49435 | 57480128 ~ 57505477 (+) |
| G277445 | NA | non-coding | downstream | 57521 | 57488214 ~ 57489144 (+) |
| G277296 | NA | other | upstream | 165676 | 57264567 ~ 57264892 (+) |
| G275553 | LOC107595854 | other | upstream | 1514435 | 55915329 ~ 55916133 (+) |
| G275542 | LOC106586374 | other | upstream | 1529825 | 55900194 ~ 55900743 (+) |
| LOC110520231 | dbr1 | other | upstream | 2055042 | 55371759 ~ 55375526 (+) |
| G274592 | NA | other | upstream | 2555453 | 54874399 ~ 54875115 (+) |
| G277973 | NA | other | downstream | 359041 | 57789734 ~ 57790332 (+) |
| G280315 | NA | other | downstream | 2622023 | 60052716 ~ 60054417 (+) |
| G281141 | NA | other | downstream | 2856695 | 60287388 ~ 60303967 (+) |
| G281591 | LOC106586456 | other | downstream | 3309546 | 60740239 ~ 60757350 (+) |
| G281714 | NA | other | downstream | 3460831 | 60891524 ~ 60893778 (+) |
