ikzf2 (LOC106586445)


Basic Information

Item Value
gene id ikzf2
gene name LOC106586445
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 59556678 ~ 59581956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597499.2
TTTCTAATATGGAGGAAGTATCGGCGGATTAACTGTTGCTGCCTGCGCcactactatattatattacagtgTGATCCAAGAAAGATATTCCAATGGGTGAAATGTGTAGGCTAGTCCTAATTTCTGAGCATAGGTGATTGGATTATTCAATCTCCTGCGTTTATAaagtaaagaaagaaagaaagaaaaacaatgCAACTCAGTGATGATATTTAGTTTACAAGGATAACGGTTACTCTGCTTTAATGACATATGCCCGTGGATAAACGCTCAATATCCGACCATTGATTCATCCAGACAATGCGATGCGTGGTGCTGTCTCCACGACATCCAGCGAGACAGCTCTCCACCAACTATGGAAACAGAGGCAACTGATGGATATTCTGCAAGTAATGGAGACTGCTCTCCCAGGAAGACAGAGAACTCTAGAATGTTGGTGGACCTGTCGGCAAACACACCCAATGCACAGCAGCCCCAGGGTCCTTATTCACCGACTGAACACACCAtcaaacaagaagaagagacagaagatGAAAGGCACAGGAGGACCACAGCTGAGGATATGGGACAAAGTGGGAAAGAGGAATCGGGATTGGAAGAGCCCATAATTGACAGCCCAAACAACCTACAGGAtggggtccctgggtcagatGGGTCATGTGACCCAGAAACTCGGCTGCCCAATGGTGATAGGCCGTTCCAGTGTAACCAGTGTGGTGTGTCGTTCACTCAGAAGGGCAATCTGTTGAGACACATCAAGCTGCACACGGGGGAGAAGCCCTTCAAATGCCCCTTCTGTAGCTACGCCTGCCGCCGTCGTGACGCACTCACAGGCCACCTACGCACACATTCAGTGGGTAAACCACACAAGTGTGACTACTGTGGGCGGAGCTACAAACAGAGGACATCATTGGAGGAGCATAAAGAGCGCTGCCATAACTACCTTGAGAGTGCTGGCATGGATCCCACCTCCGTCACTGGGCCTTATCCAGGTGAGGTCCCTAAAGAGCAGAGGCCCCTGGCGGAGGCCGCTGCCATGGCAACATTAAACCGGCCACCTGTCATTGAGAAACTGCAGAGTAATGTAGGGAAGAGGAAGAGTACCACTCCACAGAAGTTTGTGGGTGAGAAGATGATGCGTTACAGTTACCCGGAGCTGAGCTATGAGATGGGTCTGAAGTATGAGAAGGAGGCAGAGCTGATGCAGGCTCACATGATGGACCAGGCTATCAACAACGCCATCTCTTACCTGGGCTCTGACTCCCTGAGACCCCTGGTCCACCATCCCCACCCCCATGGTCCCCACGGTCCACAGCCGTCTCTTTCTATGGCCGAGGTGGTACCCATGGTCAACCCCCTCTTCCACCACGTCTACCCTCTGGGGTCAGGGCTGCGTATGGACCGACCAGGTGGCCGCGACGCCCCACCTCATCCTTCAcctctgccccctcctccccctgactTCCATCCTTCCTCCAACGGACCCATTGCCCTCACCAGACCCAAGCAGCACCACCCACAGGGTACCAAAGAGGAAAAAGAGTCTCCTAGCAACAGTGGGCTGGACTCGGCTGACTCTGCCCGGAGCAGCCCACAGGATAGAATGGGTTACCACTGGAACAACCCCCACCATCGTCCCAGATCCAGCCCAGCATATGGCGGCAGAGAGGAGGGACGAGGCGGGGCTGAGGTGGCCCAGGGAGGGGCGGCAGAGAGGCCTATAAGTCGGGAAGGAGTGCGTGTGTTTGGGCGAGAGGGGCGGAAGATGAGGGTGTTCCAGTGTGAACACTGCCGCATTCTCTTCCTGGACCACGTCATGTACACCATCCACATGGGTTGTCATGGTTACAGGGACCCACTGGAGTGCAACATCTGTGGCCACCGCAGTAAGGACCGCTATGAATTCTCATCTCACATCATCCGCGGGGAACACACCTTCAACTAGAGGGGTGGACTGGACAGGAGCCACCACTGGTCCCCGCCCCATCCCATCTCAGGACAGTGATGTTGAACTAACTGT
>XM_021597497.2
CGATACCTGTTGATGCAGGAGTGGGGGGTTCTGCGAAGTCTCTATGACACCATtcgaaatgttttttttttccccaAACAGCAATGCCAAGAGAGACACTCTATCATCTTATGTAACCTTTTTGAATTAGACTGAATGGGCACTATAGTTGATGAGACGTTCTGTCTCTACTGAAATGTATTTCTAGCTGCAGCTGTGAATATTTTGACAGGTTAGTATGAGACAGCATGTTATCTGGCATATCTCTCAAGGACTGCCTACTCACTCACTCTTGATTTCATACAATACCTTTTGAATATACTACGTATGCTTTTCTGATTCTTTAGCCCCCCTCGGTTTAAAATAGGCGTCTCCTTACTCATTTTTCTATGGCTAATTCCTTAGGAACCGGTGGATCCAGTTCTATCCTCTCGTTCTTTATTTAATTTAGTCTAAAAACAAGTTGAGTCTTCGACCTCATTGCTGCTGTAGTAAAAACAACATCCAGTGATACACAGTCTATAAATGTTGACGTGTCCATATTTAGGCTTATGAAGGTTTACTTCATAGAACACTGTAGGATACAGGGAAGGTGTGTGCGGGGGTCACGTTTGAGGTGGAAAAGTTGACAGTTTAGTTCAGCACAGAGGAAGTAACCACCAAAGCTACTTATTGAGGAGTGCGCTGCTCTGTTCCTAATCTTTATTCAGGTTGTATGCGGGACAGGACAGTGTTATACTCAACTGAAGTTTTTTTGGGGGGCATCCCACTTTTTTCGAGGAGAGTTTCCCCTCATTTTTTTGTCGATCAAAAACATATTAGGCTACTGAGCATTTGCATTTGAATTTTAAGAGGTGCAGCTTCCGCTGACGAAGATCACTGATTATCACTTGAACAGGGGAGACACAAAAGCTCTCCACCAACTATGGAAACAGAGGCAACTGATGGATATTCTGCAAACACCACTGCCATTGGATAGCCACCCGTCAGTCACCTGAGATTTCATCCAACCCCAGCGTGGCGTGTAATCGGAGACCAGACCCAGGGATTGTGTCATCATGGCCATGGACCACAACTCCCAGTGTGTCTCACCCAGCAGCAGCCAATCACAACAATGTAATGGAGACTGCTCTCCCAGGAAGACAGAGAACTCTAGAATGTTGGTGGACCTGTCGGCAAACACACCCAATGCACAGCAGCCCCAGGGTCCTTATTCACCGACTGAACACACCAtcaaacaagaagaagagacagaagatGAAAGGCACAGGAGGACCACAGCTGAGGATATGGGACAAAGTGGGAAAGAGGAATCGGGATTGGAAGAGCCCATAATTGACAGCCCAAACAACCTACAGGAtggggtccctgggtcagatGGGTCATGTGACCCAGAAACTCGGCTGCCCAATGGTGATAGGCCGTTCCAGTGTAACCAGTGTGGTGTGTCGTTCACTCAGAAGGGCAATCTGTTGAGACACATCAAGCTGCACACGGGGGAGAAGCCCTTCAAATGCCCCTTCTGTAGCTACGCCTGCCGCCGTCGTGACGCACTCACAGGCCACCTACGCACACATTCAGTGGGTAAACCACACAAGTGTGACTACTGTGGGCGGAGCTACAAACAGAGGACATCATTGGAGGAGCATAAAGAGCGCTGCCATAACTACCTTGAGAGTGCTGGCATGGATCCCACCTCCGTCACTGGGCCTTATCCAGGTGAGGTCCCTAAAGAGCAGAGGCCCCTGGCGGAGGCCGCTGCCATGGCAACATTAAACCGGCCACCTGTCATTGAGAAACTGCAGAGTAATGTAGGGAAGAGGAAGAGTACCACTCCACAGAAGTTTGTGGGTGAGAAGATGATGCGTTACAGTTACCCGGAGCTGAGCTATGAGATGGGTCTGAAGTATGAGAAGGAGGCAGAGCTGATGCAGGCTCACATGATGGACCAGGCTATCAACAACGCCATCTCTTACCTGGGCTCTGACTCCCTGAGACCCCTGGTCCACCATCCCCACCCCCATGGTCCCCACGGTCCACAGCCGTCTCTTTCTATGGCCGAGGTGGTACCCATGGTCAACCCCCTCTTCCACCACGTCTACCCTCTGGGGTCAGGGCTGCGTATGGACCGACCAGGTGGCCGCGACGCCCCACCTCATCCTTCAcctctgccccctcctccccctgactTCCATCCTTCCTCCAACGGACCCATTGCCCTCACCAGACCCAAGCAGCACCACCCACAGGGTACCAAAGAGGAAAAAGAGTCTCCTAGCAACAGTGGGCTGGACTCGGCTGACTCTGCCCGGAGCAGCCCACAGGATAGAATGGGTTACCACTGGAACAACCCCCACCATCGTCCCAGATCCAGCCCAGCATATGGCGGCAGAGAGGAGGGACGAGGCGGGGCTGAGGTGGCCCAGGGAGGGGCGGCAGAGAGGCCTATAAGTCGGGAAGGAGTGCGTGTGTTTGGGCGAGAGGGGCGGAAGATGAGGGTGTTCCAGTGTGAACACTGCCGCATTCTCTTCCTGGACCACGTCATGTACACCATCCACATGGGTTGTCATGGTTACAGGGACCCACTGGAGTGCAACATCTGTGGCCACCGCAGTAAGGACCGCTATGAATTCTCATCTCACATCATCCGCGGGGAACACACCTTCAACTAGAGGGGTGGACTGGACAGGAGCCACCACTGGTCCCCGCCCCATCCCATCTCAGGACAGTGATGTTGAACTAACTGT
>XM_021597498.2
ACCTGTTGATGCAGGAGTGGGGGGTTCTGCGAAGTCTCTATGACACCATtcgaaatgttttttttttccccaAACAGCAATGCCAAGAGAGACACTCTATCATCTTATGTAACCTTTTTGAATTAGACTGAATGGGCACTATAGTTGATGAGACGTTCTGTCTCTACTGAAATGTATTTCTAGCTGCAGCTGTGAATATTTTGACAGGTTAGTATGAGACAGCATGTTATCTGGCATATCTCTCAAGGACTGCCTACTCACTCACTCTTGATTTCATACAATACCTTTTGAATATACTACGTATGCTTTTCTGATTCTTTAGCCCCCCTCGGTTTAAAATAGGCGTCTCCTTACTCATTTTTCTATGGCTAATTCCTTAGGAACCGGTGGATCCAGTTCTATCCTCTCGTTCTTTATTTAATTTAGTCTAAAAACAAGTTGAGTCTTCGACCTCATTGCTGCTGTAGTAAAAACAACATCCAGTGATACACAGTCTATAAATGTTGACGTGTCCATATTTAGGCTTATGAAGGTTTACTTCATAGAACACTGTAGGATACAGGGAAGGTGTGTGCGGGGGTCACGTTTGAGGTGGAAAAGTTGACAGTTTAGTTCAGCACAGAGGAAGTAACCACCAAAGCTACTTATTGAGGAGTGCGCTGCTCTGTTCCTAATCTTTATTCAGGTTGTATGCGGGACAGGACAGTGTTATACTCAACTGAAGTTTTTTTGGGGGGCATCCCACTTTTTTCGAGGAGAGTTTCCCCTCATTTTTTTGTCGATCAAAAACATATTAGGCTACTGAGCATTTGCATTTGAATTTTAAGAGGTGCAGCTTCCGCTGACGAAGATCACTGATTATCACTTGAACAGGGGAGACACAAAAGCTCTCCACCAACTATGGAAACAGAGGCAACTGATGGATATTCTGCAAGTAATGGAGACTGCTCTCCCAGGAAGACAGAGAACTCTAGAATGTTGGTGGACCTGTCGGCAAACACACCCAATGCACAGCAGCCCCAGGGTCCTTATTCACCGACTGAACACACCAtcaaacaagaagaagagacagaagatGAAAGGCACAGGAGGACCACAGCTGAGGATATGGGACAAAGTGGGAAAGAGGAATCGGGATTGGAAGAGCCCATAATTGACAGCCCAAACAACCTACAGGAtggggtccctgggtcagatGGGTCATGTGACCCAGAAACTCGGCTGCCCAATGGTGATAGGCCGTTCCAGTGTAACCAGTGTGGTGTGTCGTTCACTCAGAAGGGCAATCTGTTGAGACACATCAAGCTGCACACGGGGGAGAAGCCCTTCAAATGCCCCTTCTGTAGCTACGCCTGCCGCCGTCGTGACGCACTCACAGGCCACCTACGCACACATTCAGTGGGTAAACCACACAAGTGTGACTACTGTGGGCGGAGCTACAAACAGAGGACATCATTGGAGGAGCATAAAGAGCGCTGCCATAACTACCTTGAGAGTGCTGGCATGGATCCCACCTCCGTCACTGGGCCTTATCCAGGTGAGGTCCCTAAAGAGCAGAGGCCCCTGGCGGAGGCCGCTGCCATGGCAACATTAAACCGGCCACCTGTCATTGAGAAACTGCAGAGTAATGTAGGGAAGAGGAAGAGTACCACTCCACAGAAGTTTGTGGGTGAGAAGATGATGCGTTACAGTTACCCGGAGCTGAGCTATGAGATGGGTCTGAAGTATGAGAAGGAGGCAGAGCTGATGCAGGCTCACATGATGGACCAGGCTATCAACAACGCCATCTCTTACCTGGGCTCTGACTCCCTGAGACCCCTGGTCCACCATCCCCACCCCCATGGTCCCCACGGTCCACAGCCGTCTCTTTCTATGGCCGAGGTGGTACCCATGGTCAACCCCCTCTTCCACCACGTCTACCCTCTGGGGTCAGGGCTGCGTATGGACCGACCAGGTGGCCGCGACGCCCCACCTCATCCTTCAcctctgccccctcctccccctgactTCCATCCTTCCTCCAACGGACCCATTGCCCTCACCAGACCCAAGCAGCACCACCCACAGGGTACCAAAGAGGAAAAAGAGTCTCCTAGCAACAGTGGGCTGGACTCGGCTGACTCTGCCCGGAGCAGCCCACAGGATAGAATGGGTTACCACTGGAACAACCCCCACCATCGTCCCAGATCCAGCCCAGCATATGGCGGCAGAGAGGAGGGACGAGGCGGGGCTGAGGTGGCCCAGGGAGGGGCGGCAGAGAGGCCTATAAGTCGGGAAGGAGTGCGTGTGTTTGGGCGAGAGGGGCGGAAGATGAGGGTGTTCCAGTGTGAACACTGCCGCATTCTCTTCCTGGACCACGTCATGTACACCATCCACATGGGTTGTCATGGTTACAGGGACCCACTGGAGTGCAACATCTGTGGCCACCGCAGTAAGGACCGCTATGAATTCTCATCTCACATCATCCGCGGGGAACACACCTTCAACTAGAGGGGTGGACTGGACAGGAGCCACCACTGGTCCCCGCCCCATCCCATCTCAGGACAGTGATGTTGAACTAACTGT

Function

NR:

description
zinc finger protein Helios-like isoform X2

GO:

id name namespace
GO:0005488 binding molecular_function

KEGG:

id description
K09220 IKZF, ZNFN1A; IKAROS family zinc finger protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597499.2 False 2020 mRNA 0.54 8 59556678 59581956
XM_021597497.2 False 2726 mRNA 0.51 9 59557068 59581956
XM_021597498.2 True 2565 mRNA 0.51 8 59557072 59581956

Neighbor

gene id symbol gene type direction distance location
LOC110505376 NA coding upstream 41617 59513445 ~ 59515061 (+)
LOC118944557 NA coding upstream 462473 59093144 ~ 59094205 (+)
abca12 abca12 coding upstream 491886 58961640 ~ 59064792 (+)
pofut2 LOC106586440 coding upstream 608054 58936477 ~ 58948624 (+)
LOC110504354 LOC106586434 coding upstream 1086088 58039857 ~ 58470598 (+)
erbb4b LOC106586446 coding downstream 288603 59870559 ~ 60052294 (+)
LOC110505381 NA coding downstream 685686 60267642 ~ 60269899 (+)
myl1 LOC100135947 coding downstream 695289 60277245 ~ 60286080 (+)
LOC118964303 NA coding downstream 800718 60382674 ~ 60383352 (+)
tgfbr2l LOC106586454 coding downstream 1052583 60634539 ~ 60654313 (+)
G280240 NA non-coding upstream 79690 59474706 ~ 59476988 (+)
G280168 NA non-coding upstream 146598 59409672 ~ 59410080 (+)
G280143 NA non-coding upstream 168458 59387974 ~ 59388220 (+)
G280142 NA non-coding upstream 168935 59387523 ~ 59387743 (+)
G280137 NA non-coding upstream 175723 59380751 ~ 59380955 (+)
G280324 NA non-coding downstream 11174 59593130 ~ 59593400 (+)
G280331 NA non-coding downstream 25581 59607537 ~ 59691190 (+)
G280950 NA non-coding downstream 479010 60060966 ~ 60061230 (+)
G280977 NA non-coding downstream 506208 60088164 ~ 60088370 (+)
G280994 NA non-coding downstream 518240 60100196 ~ 60100412 (+)
G277973 NA other upstream 1766346 57789734 ~ 57790332 (+)
G277296 NA other upstream 2291786 57264567 ~ 57264892 (+)
G275553 LOC107595854 other upstream 3640545 55915329 ~ 55916133 (+)
G275542 LOC106586374 other upstream 3655935 55900194 ~ 55900743 (+)
LOC110520231 dbr1 other upstream 4181152 55371759 ~ 55375526 (+)
G280315 NA other downstream 470760 60052716 ~ 60054417 (+)
G281141 NA other downstream 705432 60287388 ~ 60303967 (+)
G281591 LOC106586456 other downstream 1158283 60740239 ~ 60757350 (+)
G281714 NA other downstream 1309568 60891524 ~ 60893778 (+)
G281996 NA other downstream 1451810 61033766 ~ 61037105 (+)

Expression


Co-expression Network