LOC118944680 (tas2r8)


Basic Information

Item Value
gene id LOC118944680
gene name tas2r8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60497574 ~ 60523192 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965030.1
atggtgagagacgtGTTCcaggaaagACACATGAAGAGCATGAAAGAGAGCGGCAGCACCTCCTCTCTCCGCCTGCACAGTCAGATGAGGGTCACCATCACTGGAATCCTGCAGGGAATTCTATACTTCCTatacttccttccttccttccttctataCTTCCTTTGTGCACTAGTACATCTGCAACGTTTCCTGGGATTTGTCAACTTTTACTGCTGCTTTATCCGGAGCTACAGCACCTTGGCTTCCCACCTGTCTGCACTCATTGTTCCCAAGGTTTCGTTCATGTGGTTCCGAGCTGGTGACCGGGCGTTCCGGGATCTCAAACACcgcttcaccacagctcccatcttGGTTAATCCTGACCCGTCCCACCAGTTCGTGGTGGAAGCCGATGCTTCGGATGTcagagtgggggctgtcctgtcccagcggTCTGCCTTGGACCTCAAGTTACATCCCTGCACCTTCTTCTCCCACTCCCTCAACACCACggagaggaactacgatgtgggAAATCGTGAGCTTTTCGCAGTGAAGATAGCGTTGGAGGAGTATAGGCACTGGCTGGAGGTGGCGGACCATCCGTTCATTGTGTGGACcgaccacaagaacctggaatatctccgcacTGCCAAGTGCCTCAATTCCAGGCAAGCTAGcctgtcctccggtTTCGACCCCCAGTCCAACAGCCAGTCGGAGCGAATCAACCAGGACATAAAGACTACTCTGCGCTGCCTGGTCTCTGCCAACCCCTCCACCTGGAGCCAGCGGATTGCCACCCGACCCGGCTCCCCGGAATCATTtcgggcagaagACCCTCAGATATTGACAGGGTTTCTTTTCCATCACTTGAGCACCCAGAGTAACTCCCTCATGTCAACCTCTGTTTGGCTAAATTTTTTCTACTACACCCAGATCGTCCCAGCCCAGCGAGCTCTCTTCATCTGGGTGAAGAGGAACATCAAAATCATAATTTACTGGGGCCTGTTTGTCGACAGAGTTTTATTTATGTTTGACTTGGCATCAGTCATTTATTATGTCACCATTACCGAAGGAAACGATAACATCACTTACACATCCACAAACGACACTGTTTCTGGCTCTACAGATGGACTGTATTACACTGACCTGGTGTGTTTCTATTCCAAAATGATCTACATgtttttttgtctgtgtgtgatggtGGGGTCGAGCTGGGTCACAGTGTGCTACCTGCACAGACACATGAAGCGCATGAAAGAGAGCGGGagccccttctcctctccccgccTGCACAGTCAGATGAGGGTCACCATCACTGGGATCCTGCAGGGAATTCTCTACTTCCTTTGTGCGCTGTGGATCTTCCTTAATATCTTCAGCGACAATTACCCCTCCTCTATAAAATTTGACTATAATACTTACTACActgtcatctctctctacatgtttaGCACCACTGTTAACCTTGGTATCGGTCAGTCTGTTTTCAGACAGAGGGCAGCTGATATTTGGCTCAAAGCTCAACAGGCTGCAAGGTCATTATGCAAACCAGGTCATGGTACATTTAAGATCGTCACTGATTTCATCAGCTCCAAAATTTCACCTAGTTCAGATTTTGACAATAATTTGAATATTTTCCACACAgttgtctctctctacatgcttGTCACCACTGTATACCTGGGTATTGGTCAGTCTGTTTTCAGACAGAGGGCAGCTGATATTTGGCTCAAAGCCCAACAAGCTGTAAGGTCTTTGAAGTTGTGTGGATAAAGGATGAAACAATCGCAGTTATAAGACATTGTGTTAAGATAAAAAGGAAGATAAAGGGCCAGCTTCATGGACACAGATTAATATCAGATTTAATCAATATTATAATGGCACCTTGACTTCATATTCAGTACATTGCATCAATTATTTCTGGACTATGATTAATAATCTTCCTCTGGAAATATTGAATCACAGAACATAGGCTAAGGGTTAAATCTGGGATTTTGTTTGTCCATAAA

Function

symbol description
tas2r8 Enables bitter taste receptor activity. Involved in detection of chemical stimulus involved in sensory perception of bitter taste. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965030.1 True 1997 mRNA 0.47 8 60497574 60523192

Neighbor

gene id symbol gene type direction distance location
kansl1l NA coding downstream 34143 60421641 ~ 60463431 (-)
map2 LOC106586448 coding downstream 81271 60292403 ~ 60416303 (-)
cps1 cps1 coding downstream 243805 60165978 ~ 60253769 (-)
vwc2l LOC106586444 coding downstream 1352738 59115416 ~ 59144836 (-)
LOC110520290 myo1b coding downstream 1565320 58775631 ~ 58932254 (-)
heg1 LOC106586449 coding upstream 21912 60545104 ~ 60560296 (-)
slc12a8 slc12a8 coding upstream 37238 60560430 ~ 60589339 (-)
znf148 znf148 coding upstream 70335 60593527 ~ 60600106 (-)
LOC110520303 LOC106586453 coding upstream 83918 60607110 ~ 60615212 (-)
snx4 snx4 coding upstream 97294 60620486 ~ 60633884 (-)
G281393 NA non-coding downstream 89218 60408064 ~ 60408356 (-)
G281392 NA non-coding downstream 89635 60407197 ~ 60407939 (-)
G281390 NA non-coding downstream 91514 60405795 ~ 60406060 (-)
G281376 NA non-coding downstream 116389 60380979 ~ 60381185 (-)
G281375 NA non-coding downstream 118448 60378927 ~ 60379126 (-)
G281832 NA non-coding upstream 16940 60540132 ~ 60540345 (-)
G281872 NA non-coding upstream 92994 60616186 ~ 60616431 (-)
LOC110520306 LOC106586457 non-coding upstream 136074 60659246 ~ 60682924 (-)
LOC110520309 LOC106586458 non-coding upstream 368651 60891843 ~ 60941193 (-)
G282125 NA non-coding upstream 507194 61030386 ~ 61030761 (-)
G277749 LOC106586429 other downstream 2908391 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 3093999 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 3199812 57270782 ~ 57297762 (-)
G275250 NA other downstream 5086087 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 5378362 55068639 ~ 55122013 (-)
G284018 NA other upstream 2191383 62714575 ~ 62715177 (-)
G286522 NA other upstream 4446357 64969549 ~ 64970755 (-)
G286580 marco other upstream 4491067 65014259 ~ 65029736 (-)
G286638 NA other upstream 4531508 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 4711988 65235180 ~ 65235908 (-)

Expression


Co-expression Network