slc12a8 (slc12a8)


Basic Information

Item Value
gene id slc12a8
gene name slc12a8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 60560430 ~ 60589339 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597518.2
GTGGCAttggacaaaacaaacatttacctGCTGACGTTAGTCGAACACGTAGCAATACTACGCTTATGGTGCAGACAGAATGTGAGGGCAAAACATACGGTTGGATTTTTTTTATCACAACATTAATAATTTATATGATATTTAATGTACTTTTATTGTATTAAGATTTTAGAATGAGAAACTCGATATTTGGAACAGGCTGTTTTTGAGGACTTCAGTGGAGATGGTAGTTCATTTTtgagGCAAGTCAGGCTCGTGCTGTTGCATAATCACACCTGCCTGCATCCGGGTGGCTGTTTAGTTGTCACACCTCTATTTGGCTCTATGGAAGGGTACTAAACTAGAGTGCGTGCAGGCAAAGGTTTGGTCAAAGCGGTTATGGAAGCGTTGCCATTCGGCTGGATGCTCCACAGGTCTAACGTGGAGGATGTGACAGAACTTCTGAAGGCTAGGGAGTCTAGGAGGGCCAGCGGCAGTAAAACCACACCTGTCCAGGATCTGTTCCATGAGGACGCTCAGGGGTCGCAGCATCTCTCTCAGCCATGGTGGAGGGTGAAGCTGTTTGTGTGGGAGCCTGTCCTGTTTGGGACGTGGGACGGAGTCTTTACTACCTGTATGATCAACATCTTTGGTGTGGTGTTGTTCCTCCGCACTGGGTGGCTGGTGGGGAACCTAGGTGTATTGCTAGGTATGCTCCTGGTATCCGTGGTGGTTATCGTTGCCCTGGTAACAGTGATGTCAGGCATCGGCGTCTGCGAGCGCTGTGGTGTCGGTAGTGGTGGAGTTTACTCCATGATCTCTACTGTCCTGGGAGGAAGAGTAGGTGGGACCGTGGGGCTCCTGTATGTTTTCGGCCAGTGTGTGGCTGGGGCCATGTATATCACAGGGTTCTCAGAGTCTATTGCTCAGCTCCTGAGCCTGCAGAGTGAGTGGGCCGTTAGAGGGATGTCTGTGGCTGTCCTGCTCGGCCTTTTGGGTATTAACCTCGCCGGGGTCAAATGGATCGTCCGTCTCCAGCTGATACTACTGGCCGTGCTGGCTGTCTCAACGCTGGACTTCGTTATCGGGACGTTTTCCCACCTCGACCCAGAGCATGGCTTCGTAGGGTACTCCGAGGAGCTGCTACGTAAGAACACTCTACCAGACTACACGACAGGAGAAGGATTCTTCACTGTGTTTGGAGTGTTCTTCCCCGCTGCTACAGGTGTGATGGCAGGCTTCAACATGAGCTCAGATCTGCAGAGACCGGAACACAACATCCCTGTGGGAACACTGGCTGCCGTCTGTACCTCGTGGTTCCTGTATCTGGTCTTTGTGTTCCTGCTGGGAGCCATCTGCACCAGAGAGGCACTGCACTTCGACTTCTTAATAGCAGAAAAGGTCTCCTTGGTGGGTTTCTTGTTTCTCCTGGGCCTCTACATCTCCTCGCTGGCCTCCTGCATGGGCGGTCTGTACGGGGCACCCAGGATCCTCCAGGTCATCGCCCAGGAGAGGGTCATCCCAGCCCTCGCCTTCCTGGCACAAGGGaAAGGTCCTAATAAGACTCCGGTGGCGGCCATAGTCTTGACTAGCCTGCTGACCATGGCTTTCATCTTCATCGGACAGGTCAACGTCCTAGCCCCCATCGTCACCATCAACTTCATGCTCACTTACAGCTTCATTGACTACTCCTACttcagCGTGGCGATGACCTATAACCTCCAGcccagagagaagagggttggtcctGCCAAGAGGCCTGGGACTGGAGCCTCATCCTTCACAAACCATACATCCAAGCCCCTCATGACCACCACCCACCAGGGTTATGGTACAGAGGGGGATGTTGCGAGCCCAGGGAAGGGGACCCTGTTAGAGTTTACTAGGGATATGGACCAGATCTTTCCCCTGCCCAATGGTggtgaacaggaggagacagaaaaGGACAAGGCCACAGAGAAGGTTTCCATGCCAGGCCTGAGAGGCAGGATCAGGAGGGTGAAAGCCCCTGCCAAGAAGACTCTGATGGACAGCTTTGGGCTAGACCTTAACAGCAATGCCTTccctagtgagggagatggagaaggagatggaggggttgATCCGGCTCCCCCAGGTCCAGGAGAGTGTATCTTCCCCCAGGAAAGACCTGTAGAGCCCAGCCGAGACCCGGAGGAAGTGATACAGGACAAGACCCTCCTTCCCGGTCGTAACCCCATAGAGCTTGACCCTCCAGGGTCGCAGAGAGAAAACACTGGTTCTGACTGTAAACCAGACTACCAGGGATCAGAAATCCAACCGATGCCTGATTCCTTCTATGCCAAATTCTGCAACCACTGGATTGCACTGATTGGTACATTATGTTCCATCCTGATCATGTTTGTCATTCAGTGGGTCTATGCCTTGGCCAATATAATAGTCGCCTTGGTCCTCTTCCTCTACATTGGAAAAGCAAGCCCTGGACTTCCAATAGGAGTGGCATCTCGTTTCAGCTTTTTCAAATGGATTAGGACAACCCTGAGCAACCTAGGAAGGGGTGAGCTTCCTCAGGACCAGATTATCGTGACACCCTCTCTGTCAGGAGTCGGCATGGAAACTAGGCAGCTGACAGAGGAAAACCTGGACTTTGCCTCTCGGGACCGCTACCACCAGTCTTCCTTTATCGAACCAGACAGGATGGCGCACCTACAACTTAACTAATCACCACAACTCTGGATGGCTGGTCCCATCACAGACCATAGTAGCCTGGTCCAATATTTGTTTTGGCTGTCTTGCCAACTTGTTACAATGACCATGGGAGTTAGCAAAACAGCACAAaatgatctgggaccaggctgaaGTAATGTCTCATTCTAGaatttatagacagattattaaCAGTCAAGCTGAAATCAGTAGTCCTACTCTATGACATCTGGATTTGTACAGGTCTCTGTGACTGTGGCAATGCATTACATGTTTTAGCAATGCATTCCTCTCAATGATGTGCTCAAATGGTTCTTCTCTATTTATTGTGTCCATTATCATTgaatatataaataatacatGTTATTTTCTTCCAATCTATGTTTGACCTCTGATTAAAATGTCTGGCTTCA
>XM_021597520.2
GTGGCAttggacaaaacaaacatttacctGCTGACGTTAGTCGAACACGTAGCAATACTACGCTTATGGTGCAGACAGAATGTGAGGGCAAAACATACGGTTGGATTTTTTTTATCACAACATTAATAATTTATATGATATTTAATGTACTTTTATTGTATTAAGATTTTAGAATGAGAAACTCGATATTTGGAACAGGCTGTTTTTGAGGACTTCAGTGGAGATGGTAGTTCATTTTtgagGGTACTAAACTAGAGTGCGTGCAGGCAAAGGTTTGGTCAAAGCGGTTATGGAAGCGTTGCCATTCGGCTGGATGCTCCACAGGTCTAACGTGGAGGATGTGACAGAACTTCTGAAGGCTAGGGAGTCTAGGAGGGCCAGCGGCAGTAAAACCACACCTGTCCAGGATCTGTTCCATGAGGACGCTCAGGGGTCGCAGCATCTCTCTCAGCCATGGTGGAGGGTGAAGCTGTTTGTGTGGGAGCCTGTCCTGTTTGGGACGTGGGACGGAGTCTTTACTACCTGTATGATCAACATCTTTGGTGTGGTGTTGTTCCTCCGCACTGGGTGGCTGGTGGGGAACCTAGGTGTATTGCTAGGTATGCTCCTGGTATCCGTGGTGGTTATCGTTGCCCTGGTAACAGTGATGTCAGGCATCGGCGTCTGCGAGCGCTGTGGTGTCGGTAGTGGTGGAGTTTACTCCATGATCTCTACTGTCCTGGGAGGAAGAGTAGGTGGGACCGTGGGGCTCCTGTATGTTTTCGGCCAGTGTGTGGCTGGGGCCATGTATATCACAGGGTTCTCAGAGTCTATTGCTCAGCTCCTGAGCCTGCAGAGTGAGTGGGCCGTTAGAGGGATGTCTGTGGCTGTCCTGCTCGGCCTTTTGGGTATTAACCTCGCCGGGGTCAAATGGATCGTCCGTCTCCAGCTGATACTACTGGCCGTGCTGGCTGTCTCAACGCTGGACTTCGTTATCGGGACGTTTTCCCACCTCGACCCAGAGCATGGCTTCGTAGGGTACTCCGAGGAGCTGCTACGTAAGAACACTCTACCAGACTACACGACAGGAGAAGGATTCTTCACTGTGTTTGGAGTGTTCTTCCCCGCTGCTACAGGTGTGATGGCAGGCTTCAACATGAGCTCAGATCTGCAGAGACCGGAACACAACATCCCTGTGGGAACACTGGCTGCCGTCTGTACCTCGTGGTTCCTGTATCTGGTCTTTGTGTTCCTGCTGGGAGCCATCTGCACCAGAGAGGCACTGCACTTCGACTTCTTAATAGCAGAAAAGGTCTCCTTGGTGGGTTTCTTGTTTCTCCTGGGCCTCTACATCTCCTCGCTGGCCTCCTGCATGGGCGGTCTGTACGGGGCACCCAGGATCCTCCAGGTCATCGCCCAGGAGAGGGTCATCCCAGCCCTCGCCTTCCTGGCACAAGGGaAAGGTCCTAATAAGACTCCGGTGGCGGCCATAGTCTTGACTAGCCTGCTGACCATGGCTTTCATCTTCATCGGACAGGTCAACGTCCTAGCCCCCATCGTCACCATCAACTTCATGCTCACTTACAGCTTCATTGACTACTCCTACttcagCGTGGCGATGACCTATAACCTCCAGcccagagagaagagggttggtcctGCCAAGAGGCCTGGGACTGGAGCCTCATCCTTCACAAACCATACATCCAAGCCCCTCATGACCACCACCCACCAGGGTTATGGTACAGAGGGGGATGTTGCGAGCCCAGGGAAGGGGACCCTGTTAGAGTTTACTAGGGATATGGACCAGATCTTTCCCCTGCCCAATGGTggtgaacaggaggagacagaaaaGGACAAGGCCACAGAGAAGGTTTCCATGCCAGGCCTGAGAGGCAGGATCAGGAGGGTGAAAGCCCCTGCCAAGAAGACTCTGATGGACAGCTTTGGGCTAGACCTTAACAGCAATGCCTTccctagtgagggagatggagaaggagatggaggggttgATCCGGCTCCCCCAGGTCCAGGAGAGTGTATCTTCCCCCAGGAAAGACCTGTAGAGCCCAGCCGAGACCCGGAGGAAGTGATACAGGACAAGACCCTCCTTCCCGGTCGTAACCCCATAGAGCTTGACCCTCCAGGGTCGCAGAGAGAAAACACTGGTTCTGACTGTAAACCAGACTACCAGGGATCAGAAATCCAACCGATGCCTGATTCCTTCTATGCCAAATTCTGCAACCACTGGATTGCACTGATTGGTACATTATGTTCCATCCTGATCATGTTTGTCATTCAGTGGGTCTATGCCTTGGCCAATATAATAGTCGCCTTGGTCCTCTTCCTCTACATTGGAAAAGCAAGCCCTGGACTTCCAATAGGAGTGGCATCTCGTTTCAGCTTTTTCAAATGGATTAGGACAACCCTGAGCAACCTAGGAAGGGGTGAGCTTCCTCAGGACCAGATTATCGTGACACCCTCTCTGTCAGGAGTCGGCATGGAAACTAGGCAGCTGACAGAGGAAAACCTGGACTTTGCCTCTCGGGACCGCTACCACCAGTCTTCCTTTATCGAACCAGACAGGATGGCGCACCTACAACTTAACTAATCACCACAACTCTGGATGGCTGGTCCCATCACAGACCATAGTAGCCTGGTCCAATATTTGTTTTGGCTGTCTTGCCAACTTGTTACAATGACCATGGGAGTTAGCAAAACAGCACAAaatgatctgggaccaggctgaaGTAATGTCTCATTCTAGaatttatagacagattattaaCAGTCAAGCTGAAATCAGTAGTCCTACTCTATGACATCTGGATTTGTACAGGTCTCTGTGACTGTGGCAATGCATTACATGTTTTAGCAATGCATTCCTCTCAATGATGTGCTCAAATGGTTCTTCTCTATTTATTGTGTCCATTATCATTgaatatataaataatacatGTTATTTTCTTCCAATCTATGTTTGACCTCTGATTAAAATGTCTGGCTTCA
>XM_021597519.2
GCAGAGCAACACACCTATAAAGTGGCAttggacaaaacaaacatttacctGCTGACGTTAGTCGAACACGTAGCAATACTACGCTTATGGTGCAGACAGAATATTTTAGAATGAGAAACTCGATATTTGGAACAGGCTGTTTTTGAGGACTTCAGTGGAGATGGTAGTTCATTTTtgagGCAAGTCAGGCTCGTGCTGTTGCATAATCACACCTGCCTGCATCCGGGTGGCTGTTTAGTTGTCACACCTCTATTTGGCTCTATGGAAGGGTACTAAACTAGAGTGCGTGCAGGCAAAGGTTTGGTCAAAGCGGTTATGGAAGCGTTGCCATTCGGCTGGATGCTCCACAGGTCTAACGTGGAGGATGTGACAGAACTTCTGAAGGCTAGGGAGTCTAGGAGGGCCAGCGGCAGTAAAACCACACCTGTCCAGGATCTGTTCCATGAGGACGCTCAGGGGTCGCAGCATCTCTCTCAGCCATGGTGGAGGGTGAAGCTGTTTGTGTGGGAGCCTGTCCTGTTTGGGACGTGGGACGGAGTCTTTACTACCTGTATGATCAACATCTTTGGTGTGGTGTTGTTCCTCCGCACTGGGTGGCTGGTGGGGAACCTAGGTGTATTGCTAGGTATGCTCCTGGTATCCGTGGTGGTTATCGTTGCCCTGGTAACAGTGATGTCAGGCATCGGCGTCTGCGAGCGCTGTGGTGTCGGTAGTGGTGGAGTTTACTCCATGATCTCTACTGTCCTGGGAGGAAGAGTAGGTGGGACCGTGGGGCTCCTGTATGTTTTCGGCCAGTGTGTGGCTGGGGCCATGTATATCACAGGGTTCTCAGAGTCTATTGCTCAGCTCCTGAGCCTGCAGAGTGAGTGGGCCGTTAGAGGGATGTCTGTGGCTGTCCTGCTCGGCCTTTTGGGTATTAACCTCGCCGGGGTCAAATGGATCGTCCGTCTCCAGCTGATACTACTGGCCGTGCTGGCTGTCTCAACGCTGGACTTCGTTATCGGGACGTTTTCCCACCTCGACCCAGAGCATGGCTTCGTAGGGTACTCCGAGGAGCTGCTACGTAAGAACACTCTACCAGACTACACGACAGGAGAAGGATTCTTCACTGTGTTTGGAGTGTTCTTCCCCGCTGCTACAGGTGTGATGGCAGGCTTCAACATGAGCTCAGATCTGCAGAGACCGGAACACAACATCCCTGTGGGAACACTGGCTGCCGTCTGTACCTCGTGGTTCCTGTATCTGGTCTTTGTGTTCCTGCTGGGAGCCATCTGCACCAGAGAGGCACTGCACTTCGACTTCTTAATAGCAGAAAAGGTCTCCTTGGTGGGTTTCTTGTTTCTCCTGGGCCTCTACATCTCCTCGCTGGCCTCCTGCATGGGCGGTCTGTACGGGGCACCCAGGATCCTCCAGGTCATCGCCCAGGAGAGGGTCATCCCAGCCCTCGCCTTCCTGGCACAAGGGaAAGGTCCTAATAAGACTCCGGTGGCGGCCATAGTCTTGACTAGCCTGCTGACCATGGCTTTCATCTTCATCGGACAGGTCAACGTCCTAGCCCCCATCGTCACCATCAACTTCATGCTCACTTACAGCTTCATTGACTACTCCTACttcagCGTGGCGATGACCTATAACCTCCAGcccagagagaagagggttggtcctGCCAAGAGGCCTGGGACTGGAGCCTCATCCTTCACAAACCATACATCCAAGCCCCTCATGACCACCACCCACCAGGGTTATGGTACAGAGGGGGATGTTGCGAGCCCAGGGAAGGGGACCCTGTTAGAGTTTACTAGGGATATGGACCAGATCTTTCCCCTGCCCAATGGTggtgaacaggaggagacagaaaaGGACAAGGCCACAGAGAAGGTTTCCATGCCAGGCCTGAGAGGCAGGATCAGGAGGGTGAAAGCCCCTGCCAAGAAGACTCTGATGGACAGCTTTGGGCTAGACCTTAACAGCAATGCCTTccctagtgagggagatggagaaggagatggaggggttgATCCGGCTCCCCCAGGTCCAGGAGAGTGTATCTTCCCCCAGGAAAGACCTGTAGAGCCCAGCCGAGACCCGGAGGAAGTGATACAGGACAAGACCCTCCTTCCCGGTCGTAACCCCATAGAGCTTGACCCTCCAGGGTCGCAGAGAGAAAACACTGGTTCTGACTGTAAACCAGACTACCAGGGATCAGAAATCCAACCGATGCCTGATTCCTTCTATGCCAAATTCTGCAACCACTGGATTGCACTGATTGGTACATTATGTTCCATCCTGATCATGTTTGTCATTCAGTGGGTCTATGCCTTGGCCAATATAATAGTCGCCTTGGTCCTCTTCCTCTACATTGGAAAAGCAAGCCCTGGACTTCCAATAGGAGTGGCATCTCGTTTCAGCTTTTTCAAATGGATTAGGACAACCCTGAGCAACCTAGGAAGGGGTGAGCTTCCTCAGGACCAGATTATCGTGACACCCTCTCTGTCAGGAGTCGGCATGGAAACTAGGCAGCTGACAGAGGAAAACCTGGACTTTGCCTCTCGGGACCGCTACCACCAGTCTTCCTTTATCGAACCAGACAGGATGGCGCACCTACAACTTAACTAATCACCACAACTCTGGATGGCTGGTCCCATCACAGACCATAGTAGCCTGGTCCAATATTTGTTTTGGCTGTCTTGCCAACTTGTTACAATGACCATGGGAGTTAGCAAAACAGCACAAaatgatctgggaccaggctgaaGTAATGTCTCATTCTAGaatttatagacagattattaaCAGTCAAGCTGAAATCAGTAGTCCTACTCTATGACATCTGGATTTGTACAGGTCTCTGTGACTGTGGCAATGCATTACATGTTTTAGCAATGCATTCCTCTCAATGATGTGCTCAAATGGTTCTTCTCTATTTATTGTGTCCATTATCATTgaatatataaataatacatGTTATTTTCTTCCAATCTATGTTTGACCTCTGATTAAAATGTCTGGCTTCA

Function

symbol description
slc12a8 Predicted to enable potassium:chloride symporter activity. Acts upstream of or within cilium assembly. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC12A8 (solute carrier family 12 member 8).

NR:

description
solute carrier family 12 member 8

GO:

id name namespace
GO:0006810 transport biological_process

KEGG:

id description
K14428 SLC12A8, CCC9; solute carrier family 12 (potassium/chloride transporters), member 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597518.2 False 3077 mRNA 0.50 17 60560430 60589318
XM_021597520.2 False 2988 mRNA 0.50 16 60560430 60589318
XM_021597519.2 True 3014 mRNA 0.51 18 60560430 60589339

Neighbor

gene id symbol gene type direction distance location
heg1 LOC106586449 coding downstream 134 60545104 ~ 60560296 (-)
LOC118944680 tas2r8 coding downstream 37238 60497574 ~ 60523192 (-)
kansl1l NA coding downstream 96999 60421641 ~ 60463431 (-)
map2 LOC106586448 coding downstream 144127 60292403 ~ 60416303 (-)
cps1 cps1 coding downstream 306661 60165978 ~ 60253769 (-)
znf148 znf148 coding upstream 4188 60593527 ~ 60600106 (-)
LOC110520303 LOC106586453 coding upstream 17771 60607110 ~ 60615212 (-)
snx4 snx4 coding upstream 31147 60620486 ~ 60633884 (-)
LOC110520306 LOC106586457 coding upstream 69907 60659246 ~ 60682924 (-)
LOC118944682 NA coding upstream 97115 60686454 ~ 60689464 (-)
G281832 NA non-coding downstream 20085 60540132 ~ 60540345 (-)
G281393 NA non-coding downstream 152074 60408064 ~ 60408356 (-)
G281392 NA non-coding downstream 152491 60407197 ~ 60407939 (-)
G281390 NA non-coding downstream 154370 60405795 ~ 60406060 (-)
G281376 NA non-coding downstream 179245 60380979 ~ 60381185 (-)
G281872 NA non-coding upstream 26847 60616186 ~ 60616431 (-)
LOC110520309 LOC106586458 non-coding upstream 302504 60891843 ~ 60941193 (-)
G282125 NA non-coding upstream 441047 61030386 ~ 61030761 (-)
G282179 NA non-coding upstream 519789 61109128 ~ 61110355 (-)
G277749 LOC106586429 other downstream 2971247 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 3156855 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 3262668 57270782 ~ 57297762 (-)
G275250 NA other downstream 5148943 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 5441218 55068639 ~ 55122013 (-)
G284018 NA other upstream 2125236 62714575 ~ 62715177 (-)
G286522 NA other upstream 4380210 64969549 ~ 64970755 (-)
G286580 marco other upstream 4424920 65014259 ~ 65029736 (-)
G286638 NA other upstream 4465361 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 4645841 65235180 ~ 65235908 (-)

Expression


Co-expression Network