LOC110520322 (LOC106586411)


Basic Information

Item Value
gene id LOC110520322
gene name LOC106586411
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 61768503 ~ 61772972 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597555.2
TTTGAAGCAGGAGCTTCGCACTGTGAACATTACATCCTATGGAGTAGCCTAGAGTGGTAGAGCGGCAGACCAATCTAACACTGGATTCTTTTTTTCTCCTTTGCTTTGTTTtgagaagacaaaggagatgcaGTCTCTTGCCCAGGAAATCAAGACATTTTCCAAGACCAATTTGAGAAAGCAATGCACCCGCGTGACGACGTTGAGCGGCAGGaggataattgagacatggaaaGGGTCGACTATACATGTTGTAGAGGATAAAAGTCAGCCTGAGATAGCATGCGGCTATGTACAGGACAACAGCTGGGACGTACAAGTTGGAGTTATTAAACCTTATTTACTATTAGGCTCACAAGATGCTGCACATGACTTTGGCACTTTGAGAAAATATAagGTGTCCCACATTTTGAATGTAGCCTACGGTGTTGAAAACGCATTTCCAGACCTGTTCATTTATAAAACACTGAGCATTCTGGATGTTCCTGATACTGACATAACATCCTATTTCCAAGAGTGCTCAAAATTCATAGACCAAGCAAATGCAGAGAAAGGAGTTGTGTTGGTTCACTGCAATTCTGGAGTCTCGAGGTCAGCCTCGGTCGTCATTGGGTACCTGATGTCCACAGAAGGAAAGCCTTTCAATGATGCGTTTACCTTGGTGAAATCGGCTCGGCCAGCCACGTGCCCAAACCCAGGGTTTCTTGAACAGTTGAAAGGTTTCAAACCGAAAGGGGGCATAGAAGCCAATGGTGTGGGCTATGCATGagcaacaacagcaacacctccagGGCCAGAGTAATGCATTTCATCATCAGCCACTGTTTCTCACAAGGAGGCCATTCTGATGTGTCCAAAATTGTGCCCTATTTTCCTATACATATAGGATAATATAGTATAATGCgctggggccctggtcaaaagtagtgcaacatATAGGGAATAAGATGTCATTTGAATCTTACTATGTCCCCTAATACCCAAGGTACCCCAACATCATGTTGAGGTGTTCATTTGACGCCATTTTTTCAAAAGCCCTACAATGCCCTGTCAATATACACTGTGGGTCCAGTGTTATTCAATAGTTAAACATCTCTGTTATCAATTTCTATAAACCACTGAGTGTGGTAATGAGGCCACAATGGAATGTAAGAAAGGTATAAATATACAATTCTCAACTTGATGAACCATGTCTGTACAACAATTCTTAAGTTCATTTTGAGTCTTTCCTTTTTTGTCCCAAAATGTGTGAGGTGAAAGTTAGAGAAAACTGACTAAACTGTATTATTTAATATAGTTTTAATTTTGTTAACTTATATCTTGGTTTAAGAAATATTATGGACATCCTTACTTTGTCTTAACATATTATTTATTGCATGTTGGGATGTTATCTATGGCAAGGGATTTCAGAAACTTTCCTTGCCCAGGGTCCCCCACCCATGCAAACCGACAACCCCGGGACCCCAATCATTTGTTAGcaaaaagtaaaataatgtatTGTCTTATCATTAGGTGAATGATAATTGCAAGTATAAGTAATCATTTTTAAATTAATAGATTTGGTTTGGACTGTTTAATTATTTTAACCTAGCCGCAGTTCATTGCAAGTGTAAACTCGACTCAACTTGCTGTTGTGAAGCAAATTTTCATATTTTCATATAACTTTCATATAACTCTACATATTTTTCTATTGAGttgagagaacatttagcagaTTTGAAGCTAATTTCcagcaattctatgcatttttcCGTGGCTACTGCTGTGTGCTTTTGCTCAAATATTATTAAATCAATGTGCATGTGCCCTGGAATTTTCatttctccctgactgtctagcttttatttgattgttagttctcaaagatgctACTACTTAAAACTATACATAGTTCAATATCTTTTCTGCATGCTTTCTATCTGGTTTAGGTAGTTTAAGTTGACACTAAAACTGTTTTTCCATCCTGAAACGGCGGCCTAAGAATTTTCTATACAGAAAAAACCCTGGTAATTAGCATCATATTAAAGGGATAATTCGAGATTATGGCTATGAAgccatttatctacttccccagagtcagatggtaGCAtactagctagcatgctaacggttcctgtagacttccagttattgtgctaacggtagttagcattggctcgtgaaATTACCTCTAACGTCCTCCATACTGGACGCAGAGATTTAACAATAGTATCCACGATGGTATTCTGTTGTAGCAGCGATAttcataaaaaatgtttttttcacaTAAAATCCTCGAAAATATTTCCCCCAAATTTGAAAACCCCTGATCTATGCGACGTTGAATAAACTAAGAGAATAATATAGTGGAGgctagattttttgttgttgttgtaacagtttttatgtttttatgttattattataagttttaaatgttgttttttattgCAAAAAAATTACTATGATTGTGGGTGTTTGAAATATGATGTTTATTAATGTTAAATTATTTTATATGAACATGTTTGATAAAATGTTATGAACTCTTGTTCTAGAATGTAAACATATAATTATTCTAGTTACTTATTCTTCCATACTCAATGTAGGCTAGGCTACTGCTAACATTTACAACATAATATATGTTTCGGGAACTAGTGTGAATTGCGTTGTCAATAACCTGTTGATTAATGCAGAAATTCACCCTTTggatcaatgtgtgtgtgtaaattcaGAATATGTTTGAATAAAAT

Function

NR:

description
dual specificity protein phosphatase 19-like

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597555.2 True 2729 mRNA 0.37 4 61768503 61772972

Neighbor

gene id symbol gene type direction distance location
LOC110520320 LOC106586468 coding downstream 39902 61663705 ~ 61728601 (-)
LOC110520317 ndf1 coding downstream 185443 61578579 ~ 61583060 (-)
LOC110520318 NA coding downstream 220251 61506974 ~ 61548252 (-)
LOC118964366 NA coding downstream 497931 61270516 ~ 61270572 (-)
LOC110520314 LOC106586461 coding downstream 513865 61202903 ~ 61254638 (-)
il-1r1 il-1r1 coding upstream 117137 61890109 ~ 61916561 (-)
zmp:0000000936 LOC106586476 coding upstream 146922 61919894 ~ 61956548 (-)
il-1rii il-1rii coding upstream 184399 61957371 ~ 61964014 (-)
LOC110520327 LOC106586477 coding upstream 193656 61966628 ~ 62081171 (-)
LOC110520328 LOC106586479 coding upstream 317291 62090263 ~ 62102123 (-)
G283282 NA non-coding downstream 70184 61693218 ~ 61698319 (-)
G283256 NA non-coding downstream 78928 61653325 ~ 61689575 (-)
G283251 NA non-coding downstream 121224 61643098 ~ 61647279 (-)
G283224 NA non-coding downstream 165306 61602757 ~ 61603197 (-)
G283198 NA non-coding downstream 200028 61567975 ~ 61568475 (-)
G283373 NA non-coding upstream 72443 61845415 ~ 61849699 (-)
G283398 NA non-coding upstream 124761 61897733 ~ 61905194 (-)
G283541 LOC106586480 non-coding upstream 375345 62148317 ~ 62151490 (-)
G283587 NA non-coding upstream 475275 62248247 ~ 62254684 (-)
G283589 NA non-coding upstream 496252 62269224 ~ 62271259 (-)
G277749 LOC106586429 other downstream 4179320 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 4364928 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 4470741 57270782 ~ 57297762 (-)
G275250 NA other downstream 6357016 55410143 ~ 55411487 (-)
LOC110520227 plekhm3 other downstream 6649291 55068639 ~ 55122013 (-)
G284018 NA other upstream 941603 62714575 ~ 62715177 (-)
G286522 NA other upstream 3196577 64969549 ~ 64970755 (-)
G286580 marco other upstream 3241287 65014259 ~ 65029736 (-)
G286638 NA other upstream 3281728 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 3462208 65235180 ~ 65235908 (-)

Expression


Co-expression Network