Gene
RNA
| Item | Value |
|---|---|
| gene id | trnal-caa |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 62542589 ~ 62542698 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnal-caa | True | 84 | mRNA | 0.59 | 2 | 62542589 | 62542698 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520347 | lrch1 | coding | downstream | 9282 | 62425684 ~ 62533307 (-) |
| LOC110520342 | itm2b | coding | downstream | 293088 | 62231915 ~ 62249501 (-) |
| LOC110520336 | lcp1 | coding | downstream | 354502 | 62180497 ~ 62188087 (-) |
| LOC110520337 | LOC106575914 | coding | downstream | 367426 | 62164843 ~ 62175163 (-) |
| LOC118964371 | NA | coding | downstream | 376715 | 62165740 ~ 62165874 (-) |
| trnal-caa-2 | NA | coding | upstream | 523 | 62543221 ~ 62543329 (-) |
| LOC110520350 | LOC106586501 | coding | upstream | 5169 | 62547867 ~ 62595699 (-) |
| LOC110520353 | LOC106586507 | coding | upstream | 205726 | 62748424 ~ 62780312 (-) |
| LOC110520357 | asmt | coding | upstream | 290210 | 62832908 ~ 62841097 (-) |
| LOC110520356 | LOC106586509 | coding | upstream | 298762 | 62841460 ~ 62853914 (-) |
| G283899 | NA | non-coding | downstream | 62459 | 62478534 ~ 62480130 (-) |
| G283697 | NA | non-coding | downstream | 129550 | 62412716 ~ 62413039 (-) |
| G283589 | NA | non-coding | downstream | 271330 | 62269224 ~ 62271259 (-) |
| G283587 | NA | non-coding | downstream | 287905 | 62248247 ~ 62254684 (-) |
| G283541 | LOC106586480 | non-coding | downstream | 391099 | 62148317 ~ 62151490 (-) |
| G283973 | NA | non-coding | upstream | 71973 | 62614671 ~ 62621593 (-) |
| G283974 | NA | non-coding | upstream | 81510 | 62624208 ~ 62624555 (-) |
| G283989 | NA | non-coding | upstream | 109343 | 62652041 ~ 62652651 (-) |
| G283990 | NA | non-coding | upstream | 109980 | 62652678 ~ 62653109 (-) |
| G283991 | NA | non-coding | upstream | 110742 | 62653440 ~ 62654877 (-) |
| G277749 | LOC106586429 | other | downstream | 4953406 | 57584386 ~ 57589183 (-) |
| G277673 | LOC106586423 | other | downstream | 5139014 | 57402984 ~ 57403575 (-) |
| si:dkey-91i10.3 | LOC106586420 | other | downstream | 5244827 | 57270782 ~ 57297762 (-) |
| G275250 | NA | other | downstream | 7131102 | 55410143 ~ 55411487 (-) |
| LOC110520227 | plekhm3 | other | downstream | 7423377 | 55068639 ~ 55122013 (-) |
| G284018 | NA | other | upstream | 171877 | 62714575 ~ 62715177 (-) |
| G286522 | NA | other | upstream | 2426851 | 64969549 ~ 64970755 (-) |
| G286580 | marco | other | upstream | 2471561 | 65014259 ~ 65029736 (-) |
| G286638 | NA | other | upstream | 2512002 | 65054700 ~ 65075985 (-) |
| G286953 | LOC107579696 | other | upstream | 2692482 | 65235180 ~ 65235908 (-) |
