serp2


Basic Information

Item Value
gene id serp2
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63519786 ~ 63525770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597636.2
CGGCTTCATCATCCCTGCATCGAAATTACGCCGGCATATAACAATTTTACATCAATATAACATTCTCAGAAAATGGTAGCAAAACAAAGGATCCGTATGGCAAATGAAAAGCACAGCAAAAACATCACGCAGAGAGGCAACGTTGCAAAGACCCTGCGACCTCAGGAAGAGAAGTACCCCGTGGGGCCGTGGCTCCTGGCTCTGTTCGTCttcgtcgtctgtggatctgATCATCCAGAGCATCAGGATGGGAATGTGATCCAGAGGTCCCAcagactctcccctctctccccacacccGCTCATCAGACCTGAGGCTGCTCGCCACCCTACGTACCTCCCTAACACCTCCAGGAGGCCTGGAGGTCCGGACAGCTCTGTGTCCATCAGGGAAGGCCTGAGAGATGAGTGGACCACCCCCCTTCCCCCCTCGATTTTTCTCAATCACATGTTTACAGAGTTCCAGGCTGTGGAGATGAGAGCTTTTCTACTGACAGTCTAAACCACAACCAATGGCTGGCTCAATCTCGTACAGAGTGTTTTACACCTGCTcatatgtgtgagtgtgagactgtgagtgaatgtgtatgtgtgtgcagtcACTGATGTGACTGGCTGCTGTGCAATACTGCTGTGTTTCTATATACACtcaccggacagtttattaggtacaccaccttGTTCACAAAAATGATTCGCTCCTACTGACAGTGaccatggcttgctatataaagcaggcagacaggaatctagacattcagttactgttcaattgaacgttagaatgAGCAAAACAATTGACCTAAGTGACTTTAAGCGAGGTATGATTGTCGGTGCCAGGCGCGCCGGATCCAGTATTTCAAATGGCCGCCCTCCTGGGCTTTCATgcatgacagtgtctagggtttaccgagaatggtgcgacaaacaagaAACATTCAGTCAGTGCTGGTGAAAACAGCTAGCTGATGAGGGAGGCTGTAGGAGAATGGCAcaaattgtgcaagctaacaggcaggccacaaacagacaaataatggcACAGTataacagtggtgtgcagaacggcatcacGGAAGACACAACTCGtcgatccttgtcacggatgggctattgcagcagacgaccaaactgggttccactcctatcagctaaaaacattAAGAAACGTCTCCAGTGGAcatgcgatcaccaacactgaacaattgaggagtggaaaaacattgtctGGAACATGACAGTGAGTTCAGTTTACTTGATTGGCCTGCgcagtccccagacctcaacccaataagAGCATCTTTGGATAAGATGGAACGGGGTTCCGATCCAGTACTAGATGGAAGTACTTAATAAACAGGCCGGTGAGTGTATATCTGTGTTGTGTGAGAACCTTTTTCAAATAAATGTGACTCATTTGGGA
>XM_021597637.2
CGAAATTACGCCGGCATATAACAATTTTACATCAATATAACATTCTCAGAAAATGGTAGCAAAACAAAGGATCCGTATGGCAAATGAAAAGCACAGCAAAAACATCACGCAGAGAGGCAACGTTGCAAAGACCCTGCGACCTCAGGAAGAGAAGTACCCCGTGGGGCCGTGGCTCCTGGCTCTGTTCGTCttcgtcgtctgtggatctgCAATCTTTCAGATCATCCAGAGCATCAGGATGGGAATGTGATCCAGAGGTCCCAcagactctcccctctctccccacacccGCTCATCAGACCTGAGGCTGCTCGCCACCCTACGTACCTCCCTAACACCTCCAGGAGGCCTGGAGGTCCGGACAGCTCTGTGTCCATCAGGGAAGGCCTGAGAGATGAGTGGACCACCCCCCTTCCCCCCTCGATTTTTCTCAATCACATGTTTACAGAGTTCCAGGCTGTGGAGATGAGAGCTTTTCTACTGACAGTCTAAACCACAACCAATGGCTGGCTCAATCTCGTACAGAGTGTTTTACACCTGCTcatatgtgtgagtgtgagactgtgagtgaatgtgtatgtgtgtgcagtcACTGATGTGACTGGCTGCTGTGCAATACTGCTGTGTTTCTATATACACtcaccggacagtttattaggtacaccaccttGTTCACAAAAATGATTCGCTCCTACTGACAGTGaccatggcttgctatataaagcaggcagacaggaatctagacattcagttactgttcaattgaacgttagaatgAGCAAAACAATTGACCTAAGTGACTTTAAGCGAGGTATGATTGTCGGTGCCAGGCGCGCCGGATCCAGTATTTCAAATGGCCGCCCTCCTGGGCTTTCATgcatgacagtgtctagggtttaccgagaatggtgcgacaaacaagaAACATTCAGTCAGTGCTGGTGAAAACAGCTAGCTGATGAGGGAGGCTGTAGGAGAATGGCAcaaattgtgcaagctaacaggcaggccacaaacagacaaataatggcACAGTataacagtggtgtgcagaacggcatcacGGAAGACACAACTCGtcgatccttgtcacggatgggctattgcagcagacgaccaaactgggttccactcctatcagctaaaaacattAAGAAACGTCTCCAGTGGAcatgcgatcaccaacactgaacaattgaggagtggaaaaacattgtctGGAACATGACAGTGAGTTCAGTTTACTTGATTGGCCTGCgcagtccccagacctcaacccaataagAGCATCTTTGGATAAGATGGAACGGGGTTCCGATCCAGTACTAGATGGAAGTACTTAATAAACAGGCCGGTGAGTGTATATCTGTGTTGTGTGAGAACCTTTTTCAAATAAATGTGACTCATTTGGGA
>TU323048
AGAGCAGTGGGGGTCTCGCGGCTTCATCATCCCTGCATCGAAATTACGCCGGCATATAACAATTTTACATCAATATAACATTCTCAGAAAATGGTAGCAAAACAAAGGATCCGTATGGCAAATGAAAAGCACAGCAAAAACATCACGCAGAGAGGCAACGTTGCAAAGACCCTGCGACCTCAGGAAGAGAAGTACCCCGTGGGGCCGTGGCTCCTGGCTCTGTTCGTCttcgtcgtctgtggatctgCAATCTTTCAGATCATCCAGAGCATCAGGATGGGAATGTGATCCAGAGGTCCCAcagactctcccctctctccccacacccGCTCATCAGACCTGAGGCTGCTCGCCACCCTACGTACCTCCCTAACACCTCCAGGAGGCCTGGAGGTCCGGACAGCTCTGTGTCCATCAGGGAAGGCCTGAGAGATGAGTGGACCACCCCCCTTCCCCCCTCGATTTTTCTCAATCACATGTTTACAGAGTTCCAGGCTGTGGAGATGAGAGCTTTTCTACTGACAGTCTAAACCACAACCAATGGCTGGCTCAATCTCGTACAGAGTGTTTTACACCTGCTcatatgtgtgagtgtgagactgtgagtgaatgtgtatgtgtgtgcagtcACTGATGTGACTGGCTGCTGTGCAATACTGCTGTGTTTCTATATACACtcaccggacagtttattaggtacaccaccttGTTCACAAAAATGATTCGCTCCTACTGACAGTGaccatggcttgctatataaagcaggcagacaggaatctagacattcagttactgttcaattgaacgttagaatgAGCAAAACAATTGACCTAAGTGACTTTAAGCGAGGTATGATTGTCGGTGCCAGGCGCGCCGGATCCAGTATTTCAAATGGCCGCCCTCCTGGGCTTTCATgcatgacagtgtctagggtttaccgagaatggtgcgacaaacaagaAACATTCAGTCAGTGCTGGTGAAAACAGCTAGCTGATGAGGGAGGCTGTAGGAGAATGGCAcaaattgtgcaagctaacaggcaggccacaaacagacaaataatggcACAGTataacagtggtgtgcagaacggcatcacGGAAGACACAACTCGtcgatccttgtcacggatgggctattgcagcagacgaccaaactgggttccactcctatcagctaaaaacattAAGAAACGTCTCCAGTGGAcatgcgatcaccaacactgaacaattgaggagtggaaaaacattgtctGGAACATGACAGTGAGTTCAGTTTACTTGATTGGCCTGCgcagtccccagacctcaacccaataagAGCATCTTTGGATAAGATGGAACGGGGTTCCGATCCAGTACTAGATGGAAGTACTTAATAAACAGGCCGGTGA

Function

NR:

description
PREDICTED: acidic leucine-rich nuclear phosphoprotein 32 family member B-like isoform X1

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597636.2 False 1422 mRNA 0.48 3 63519804 63525770
XM_021597637.2 False 1413 mRNA 0.48 3 63519824 63525770
TU323048 True 1396 lncRNA 0.49 3 63519786 63525715

Neighbor

gene id symbol gene type direction distance location
lacc1 lacc1 coding upstream 62233 63414756 ~ 63457571 (+)
LOC110520367 tnfsf11 coding upstream 285147 63225253 ~ 63234657 (+)
LOC110520366 akap11 coding upstream 315209 63173236 ~ 63204595 (+)
LOC110520364 LOC106586514 coding upstream 390789 63124380 ~ 63129015 (+)
LOC110520363 NA coding upstream 400397 63113667 ~ 63119407 (+)
gtf2f2b LOC105016382 coding downstream 100070 63625840 ~ 63682242 (+)
LOC118944562 LOC106562846 coding downstream 362488 63888258 ~ 63889211 (+)
LOC110504443 fbxo47 coding downstream 368895 63894665 ~ 63900193 (+)
LOC110520383 LOC106586541 coding downstream 446909 63972679 ~ 63974476 (+)
LOC110520382 LOC106586539 coding downstream 854821 64380591 ~ 64382791 (+)
G284858 NA non-coding upstream 18397 63501174 ~ 63501407 (+)
G284646 NA non-coding upstream 49167 63470356 ~ 63470637 (+)
G284600 NA non-coding upstream 128087 63391453 ~ 63391717 (+)
G284595 NA non-coding upstream 132854 63386442 ~ 63386950 (+)
G284968 kctd4 non-coding downstream 123168 63648938 ~ 63661435 (+)
G284975 NA non-coding downstream 149461 63675231 ~ 63720212 (+)
G284986 LOC106586530 non-coding downstream 180798 63706568 ~ 63722064 (+)
G284963 NA non-coding downstream 203940 63729710 ~ 63734409 (+)
G285001 NA non-coding downstream 217236 63743006 ~ 63745493 (+)
G284599 NA other upstream 128520 63390931 ~ 63391284 (+)
G284537 NA other upstream 207410 63267119 ~ 63312394 (+)
G284313 NA other upstream 497213 63016326 ~ 63022591 (+)
LOC110504398 LOC106586506 other upstream 812834 62705451 ~ 62712740 (+)
G285203 NA other downstream 545662 64071432 ~ 64083982 (+)
G285763 NA other downstream 780742 64306512 ~ 64307360 (+)
G286679 NA other downstream 1583486 65109256 ~ 65109637 (+)

Expression

serp2 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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serp2 Expression in each Bioproject

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serp2 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network