en1a (en1)


Basic Information

Item Value
gene id en1a
gene name en1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64987753 ~ 64995840 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597678.2
GAAGATCGAACTGTCATACCTACAGTGGTGAAAAGCTCGGGGCTGCGAGAGGAGAGCGCAAAGCCTTGTCAGTCTTGTCATGTCGACGACCATGACACGTTGGAGCGTTACGCACGAGGGATGTCAACAATTTAGAAATCAAAAAGTGCCCCAAATCAGAGAGTTATTAATGAGCCTTTAGTGGTCACCGTATTGCTTCATTCTTTTATATTTGGATACCAATACACACCAACAAGTGGAATTAGTTAGGAGCCTGGATCGACCCTTTTGCAGTCCCTTTCAGCAATGGAGAAGCAAAGGGCTCTACACAGCCCGGAGTCTAGTGAAGGGGAGAGCGTTTCTCCTTCTCGCAGTCTGCCTTCGCCGCCCATCCTGCCTCTCCAAGCAGCGCAGCAAGCGCACAGAACCACGAACTTTTTTATTGACAATATTCTGCGGCCAGATTTCGGCTGCCGGAAGGAGCATGGTTTAGGGGCTAGGGAACGTGCGCAGACTTCCAGTCGAGAGCGCGCCCAACCTTTGGTTGCCAGGCCGAATCATCCTGGAACCCCATGCCAGGACTCTAACTGCAGCAGCGACAGCACTTCTTCCTCCACCTCGTCCTTGGCCTTGTCTCCCACCCCCCAAAAGAGCACCTCGTCATCGAAGGCTGACGAGAGCTCTGGAGGCAGCACGCCAAAGTTCGGCGAGAACACATCTTCTGTCATGGTTGTGAACGGCGGTAGTGGCGGCGCAGCGCCCAAAGCCGAGTCCCAGCCGCTGCTGTGGCCTGCCTGGGTGTACTGCACTAGATACTCGGACAGGCCGTCATCTGGCCCAAGGACACGGAAATTGAAAAAGACGAAAAATGAAAAGGAAGACAAGCGACCCAGAACGGCGTTCACGGTTGAGCAGCTCCAAAGACTGAAAACTGAGTTCCAGGCCAACCGTTATATCACGGAGCAGAGGAGACAGTCTCTAGCTCAAGAGCTCAACCTCAATGAGTCACAAATCAAAATCTGGTTCCAAAACAAACGGGCGAAAATAAAAAAGGCCAACGGCTATAAGAACGGCCTGGCTCTCCAGCTCATGGCGCAAGGATTGTACAACCATTCCACCACCACCATTCAGGAAGACAAGGAGGAGAGTGACTGAGACTTCGCTTGCAGGAGTCACCTTTTGGGGGCACAATATTTGTGGAAAGTCAAGGCTATTGTAAAGAGATTTTCCATTTGTTGATAGGGCTAAATGTGTAGCCTATATGTGGACATAAACTATCAAAGTATGCCTACAAACTACAAACATGAATGAAAATGAATAGCCCATAATGAGACGTTGTATATTTAATTTAAGAAGAAGGGGTAAGCTATAGGAATATGACTACTCATCCCGCACTTGCTGGATAATTATATGATTGTTATCTTTGTCGCTTTAGGCCTAATGTGTTGTGATCTCTCTCTTATATCAAACCTCGATGAACATACAGACTGCGATCTGCCACTTCAAGCCAAAGATTTTATCGGAAAAAACAGCCTGAAAAAACTGAATCTCCCTGTTATCGTACCTTTTTCCTGAACTGCGAGTCTCTAACAATCAGTAGACCGCTGTTGTCATTAGTTGCCTGCCGCTTGATGTAGCCCCTCAACCCGTTTGGGTGGAAAGGATATATGACTCAACTCGTGTTGGATTCACCTTATATTGGAAtaccacaaagacacagcagcATCAGACTCTCTTGAAATATATGTAATCTCCCTCCATGATTAGAGGGGATGCATATACTAAGCTACATCTAAACAATGTTAACAAATAAACATTTTTCTATTGGAAAAAAGGCAA
>XM_021597676.2
GTGAAGATCGAACTGTCATACCTACAGTGGTGAAAAGCTCGGGGCTGCGAGAGGAGAGCGCAAAGCCTTGTCAGTCTTGTCATGTCGACGACCATGACACGTTGGAGCGTTACGCACGAGGGATGTCAACAATTTAGAAATCAAAAAGTGCCCCAAATCAGAGAGTTATTAATGAGCCTTTAGTGGTCACCGTATTGCTTCATTCTTTTATATTTGGATACCAATACACACCAACAAGTGGAATTAGTTAGGAGCCTGGATCGACCCTTTTGCAGTCCCTTTCAGCAATGGAGAAGCAAAGGGCTCTACACAGCCCGGAGTCTAGTGAAGGGGAGAGCGTTTCTCCTTCTCGCAGTCTGCCTTCGCCGCCCATCCTGCCTCTCCAAGCAGCGCAGCAAGCGCACAGAACCACGAACTTTTTTATTGACAATATTCTGCGGCCAGATTTCGGCTGCCGGAAGGAGCATGGTTTAGGGGCTAGGGAACGTGCGCAGACTTCCAGTCGAGAGCGCGCCCAACCTTTGGTTGCCAGGCCGAATCATCCTGGAACCCCATGCCAGGACTCTAACTGCAGCAGCGACAGCACTTCTTCCTCCACCTCGTCCTTGGCCTTGTCTCCCACCCCCCAAAAGAGCACCTCGTCATCGAAGGCTGACGAGAGCTCTGGAGGCAGCACGCCAAAGTTCGGCGAGAACACATCTTCTGTCATGGTTGTGAACGGCGGTAGTGGCGGCGCAGCGCCCAAAGCCGAGTCCCAGCCGCTGCTGTGGCCTGCCTGGGTGTACTGCACTAGATACTCGGACAGGCCGTCATCTGTAGGCCCAAGGACACGGAAATTGAAAAAGACGAAAAATGAAAAGGAAGACAAGCGACCCAGAACGGCGTTCACGGTTGAGCAGCTCCAAAGACTGAAAACTGAGTTCCAGGCCAACCGTTATATCACGGAGCAGAGGAGACAGTCTCTAGCTCAAGAGCTCAACCTCAATGAGTCACAAATCAAAATCTGGTTCCAAAACAAACGGGCGAAAATAAAAAAGGCCAACGGCTATAAGAACGGCCTGGCTCTCCAGCTCATGGCGCAAGGATTGTACAACCATTCCACCACCACCATTCAGGAAGACAAGGAGGAGAGTGACTGAGACTTCGCTTGCAGGAGTCACCTTTTGGGGGCACAATATTTGTGGAAAGTCAAGGCTATTGTAAAGAGATTTTCCATTTGTTGATAGGGCTAAATGTGTAGCCTATATGTGGACATAAACTATCAAAGTATGCCTACAAACTACAAACATGAATGAAAATGAATAGCCCATAATGAGACGTTGTATATTTAATTTAAGAAGAAGGGGTAAGCTATAGGAATATGACTACTCATCCCGCACTTGCTGGATAATTATATGATTGTTATCTTTGTCGCTTTAGGCCTAATGTGTTGTGATCTCTCTCTTATATCAAACCTCGATGAACATACAGACTGCGATCTGCCACTTCAAGCCAAAGATTTTATCGGAAAAAACAGCCTGAAAAAACTGAATCTCCCTGTTATCGTACCTTTTTCCTGAACTGCGAGTCTCTAACAATCAGTAGACCGCTGTTGTCATTAGTTGCCTGCCGCTTGATGTAGCCCCTCAACCCGTTTGGGTGGAAAGGATATATGACTCAACTCGTGTTGGATTCACCTTATATTGGAAtaccacaaagacacagcagcATCAGACTCTCTTGAAATATATGTAATCTCCCTCCATGATTAGAGGGGATGCATATACTAAGCTACATCTAAACAATGTTAACAAATAAACATTTTTCTATTGGAAAAAAGGCAA
>TU324889
cctcagacatggatggacgtcgaatactgacttgtattacgggtgacctggctgccaTAATGATTTAATTAACCTCGTGTCTTTATTCATTTtgtatgtattttgtatattatCGTCTTATACCGATGATCCTTAGCAGCAACCACACGGCCATGTTCATGACGcatttacagaggaagcaaatgaagTAGGCCCAAGGACACGGAAATTGAAAAAGACGAAAAATGAAAAGGAAGACAAGCGACCCAGAACGGCGTTCACGGTTGAGCAGCTCCAAAGACTGAAAACTGAGTTCCAGGCCAACCGTTATATCACGGAGCAGAGGAGACAGTCTCTAGCTCAAGAGCTCAACCTCAATGAGTCACAAATCAAAATCTGGTTCCAAAACAAACGGGCGAAAATAAAAAAGGCCAACGGCTATAAGAACGGCCTGGCTCTCCAGCTCATGGCGCAAGGATTGTACAACCATTCCACCACCACCATTCAGGAAGACAAGGAGGAGAGTGACTGAGACTTCGCTTGCAGGAGTCACCTTTTGGGGGCACAATATTTGTGGAAAGTCAAGGCTATTGTAAAGAGATTTTCCATTTGTTGATAGGGCTAAATGTGTAGCCTATATGTGGACATAAACTATCAAAGTATGCCTACAAACTACAAACATGAATGAAAATGAATAGCCCATAATGAGACGTTGTATATTTAATTTAAGAAGAAGGGGTAAGCTATAGGAATATGACTACTCATCCCGCACTTGCTGGATAATTATATGATTGTTATCTTTGTCGCTTTAGGCCTAATGTGTTGTGATCTCTCTCTTATATCAAACCTCGATGAACATACAGACTGCGATCTGCCACTTCAAGCCAAAGATTTTATCGGAAAAAACAGCCTGAAAAAACTGAATCTCCCTGTTATCGTACCTTTTTCCTGAACTGCGAGTCTCTAACAATCAGTAGACCGCTGTTGTCATTAGTTGCCTGCCGCTTGATGTAGCCCCTCAACCCGTTTGGGTGGAAAGGATATATGACTCAACTCGTGTTGGATTCACCTTATATTGGAAtaccacaaagacacagcagcATCAGACTCTCTTGAAATATATGTAATCTCCCTCCATGATTAGAGGGGATGCATATACTAAGCTACATCTAAACAATGTTAACAA

Function

symbol description
en1 Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Located in nucleus. Implicated in Parkinson's disease.

NR:

description
homeobox protein engrailed-1-B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597678.2 False 1818 mRNA 0.47 2 64987753 64992151
XM_021597676.2 False 1823 mRNA 0.47 2 64987753 64992153
TU324889 True 1165 lncRNA 0.42 2 64987783 64995840

Neighbor

gene id symbol gene type direction distance location
LOC118944694 ccdc93 coding downstream 91770 64884338 ~ 64895983 (-)
LOC110520386 LOC106586581 coding downstream 96766 64862026 ~ 64890987 (-)
LOC110520388 cssa25h3orf38 coding downstream 131902 64852503 ~ 64855851 (-)
LOC110520379 NA coding downstream 346188 64485789 ~ 64641565 (-)
LOC110520380 LOC106586540 coding downstream 813477 63911999 ~ 64174276 (-)
c1ql2 LOC106586564 coding upstream 114576 65106729 ~ 65108799 (-)
c3h2orf76 cssa25h2orf76 coding upstream 154367 65146520 ~ 65150171 (-)
LOC110520397 sctr coding upstream 181805 65173958 ~ 65182654 (-)
LOC110520402 gja3 coding upstream 328741 65320894 ~ 65326014 (-)
gjb8 cxb6 coding upstream 334009 65326162 ~ 65330529 (-)
G286536 NA non-coding downstream 9229 64978246 ~ 64978524 (-)
G286523 NA non-coding downstream 16156 64971258 ~ 64971597 (-)
G286520 NA non-coding downstream 18294 64969235 ~ 64969459 (-)
G286463 NA non-coding downstream 59467 64891105 ~ 64928286 (-)
G286426 NA non-coding downstream 202902 64783433 ~ 64784851 (-)
G286579 NA non-coding upstream 5075 64997228 ~ 64997456 (-)
G286687 NA non-coding upstream 123095 65115248 ~ 65115510 (-)
G286701 NA non-coding upstream 132302 65124455 ~ 65124772 (-)
G286702 NA non-coding upstream 133377 65125530 ~ 65125741 (-)
G286703 NA non-coding upstream 133977 65126130 ~ 65126346 (-)
G286522 NA other downstream 16998 64969549 ~ 64970755 (-)
G284018 NA other downstream 2272576 62714575 ~ 62715177 (-)
G277749 LOC106586429 other downstream 7398570 57584386 ~ 57589183 (-)
G277673 LOC106586423 other downstream 7584178 57402984 ~ 57403575 (-)
si:dkey-91i10.3 LOC106586420 other downstream 7689991 57270782 ~ 57297762 (-)
G286580 marco other upstream 22106 65014259 ~ 65029736 (-)
G286638 NA other upstream 62547 65054700 ~ 65075985 (-)
G286953 LOC107579696 other upstream 243027 65235180 ~ 65235908 (-)
G286985 LOC106586592 other upstream 306054 65298207 ~ 65300417 (-)
G287042 NA other upstream 454672 65446825 ~ 65447283 (-)

Expression


Co-expression Network