marco (marco)


Basic Information

Item Value
gene id marco
gene name marco
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65014291 ~ 65029795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974924.1
GAGGATTCCATGTTTTTTACGTAATGATGAGTTGTTATAAGAGGGCCTTGAGGAGGAATTCTGGGCTGTTGTCTGTCACTTTGGAGTAACATGGAGACATCAGTAGACAGAGGAGAGGGCCACGTCAGCTCGTTCTGCCAGAGTAACCCACTTTATGACATGGACATGAAACTGAGCAGGACGGACCTGTACACCTTCCAGAGCAGTGATCTAAAACCAGCCAAGGCCAGAGGAGCACAGCGATGTCTAAATGTTATTGTCGTTTACCTCATCCTTCTGACTGCTCTGAATGCCTTCTTCCTTTACAAAGTGTTTTCGATGGAGGCTAGtagtctctcctcctctggctccaGAACAGCGAAGCTGACCGACAATCACATCCCCCTGGAGGAGGACCTCCGTACCCTTGCCAGAAACACCAGTTTGGAGACCATCTCTCTCAGAGGATACCTGGGGAAGTTACAGACTCAGGTCAACAGCCTCTGTGGGGAGGATGGCCAGCTGGGCCAGCTGAGAACAAACCTGGGTGCGGTCAACGCCAGCACCACTCTCCTTCAGGACTCAGTGAAAGCATTCAGATTACTCAAAGCTTCACCAGGCCCACAGGGACCTACTGGTCCACCTGGTGCGAGGGGGTTACCTGGTGTGAGGGTGGACAAGGGAGACAGGGGTCAGACAGGACAAAAAGGAGACCCTGGAGTTGATGGCCAGACTGGAGCCAAGGGAGAAGCAGGGGAACCAGGACCCGAAGGTGAAGATGGTACCACTGGACAACAAGGACGAGCTGGAACACCAGGCGGTGCAGCTACTAACTGTTCAGGAGCCCCTGGGCTGCCAGGACCACAGGGACCAAAGGGGGATATGGGACACATTGGTTTACCAGGGATACCAGGCCAAAATGGGATCAAAGGGCACACTGGAGCCCAGGGCCGTGATGGAGTACAGGGGGCCCCTGATTTGAAGGGTGACACAGGGCCGACAGGACTACCTGGACCCATAGGACCTGAAGGACCAAGAGGACTTGCTGGTGTTAATGGAACAAGAGGacttgttgGATTTCCAGGGTTGCCGGGAAGTCCCGGACCGCTAGGTCCACGTGGAGAGAAGGGTGAAAGAGCAGCTGGATCAGtgacaGCAAATGTGCGTATCGCTGGCGGGGGGACTCGtgggagagtggaggtgatgTGGTCGGGGCAGTGGGGTACGGTGTGTGATGACGGCTTTGACACTCTGGACGGGACAGTGATCTGCAAGATGCTGGGGTACCAACGAGCCTCCACAGTCTTCACAGCCAGCCATGGAATCGGTAGGATCTGGTTGGATGACCTGCGATGCACAGGCAGAGAGGCCAGTGTGTTTTATTGCCTTCACAATGGTATGGGCATCAGCAACTGTCAACACAACGAGGACGCtggggtgcagtgtgtgtgaatgtgtcctGGATCCAGAGTAGGAGAGGTGCACAGCAAGAGAGAGAcgtacacgtacacacgtacacacacacacacacacacacacacacacacacactaaagtatGTCCACACATACATTAACATGTTACAGATGGTAATTCATGTTACTGTGACTTgttacatctactgtatcttatcTTTTTTAAACAACATTAGTAAGTCATTGTTGATATACACTTGGCATTTACCTAACGTGTAGCTAACTTAGGTCTACCCATTGTCTCACGTCAGATGGTGTCAGTCTTGTAGGACGTGGAACTCATCTCTAAAAATCTAGATTTTGCTCATCTGCCGAACACTAGTTCCTAACTCTATGACGTATCTATGACGCACTGACTACTACCATGCTTGATCAGCTGAGAAAACTTGCCCAAGCTAGGAGCATAGTGATAACGTGTTTGAATGGCCATTACTGTAGCTATTTTGCCAATCTTGTTGATGAATAACCAAAGTTATGGGACTGTTCTAAGAAATCAGCATGTATCTGACTCTGACAGCTGGCACTGTGCCTCACTACTTTGTAACATTTGGCCAATACAATAACATCGCAGCTAGCCTAAAGCAGTCAAGCTGTGCTGCAAAACTCACTAATCACGGCAAAACAGAAACTGCCTTATCATGAAAACTCGTGCTATTAGCTAGAATATCActacactagctagctagagGGAGCATTCAGCATTGAGTGTGTGAATTGTCATTGTTAGCATCCCTTGCTTTGAGACTGGTTCAGTCAGCAAGcagacactagctagctagctagctaattttcgTGGACATTTAGATTTTCATGAACTCTTATTCTACACCCACAAAACACCTTAACTAAATGTAGAATTAGGGTATTGAAGAATTTGtgattaaataaatgtaaatattaGCTACAGGTTTATAGTTTTAAAATGAACTATAACTCTTATTAGGATTCAAGGGGGTTCAGTGGACGATGTCACCTTGATAACATTTTTGAATATTAGGACAGCATATTGTAGTCAAACTTCTTTTTAGCTTTCCCATGAGTGTTTCCGAGTTATCAGAGAGATGAGTGCAGACGGCCTTCGCACTGATGTGAGACAATGAGGCCTACCTGTAATAATGTACCCTGGAGGAAGGTTTATACAGAATACATGGTATTTTCTGAATTACACTTTGTAAACAACCAGTTTAATTAATCAGTTTGAAATAAAACACTGAAGAATCTGACAATATGAGTCAGATTCAGTTTGT

Function

symbol description
marco Predicted to be an extracellular matrix structural constituent. Acts upstream of or within defense response to bacterium and phagocytosis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular matrix and extracellular space. Human ortholog(s) of this gene implicated in pulmonary tuberculosis. Orthologous to human MARCO (macrophage receptor with collagenous structure).

NR:

description
macrophage receptor MARCO-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974924.1 True 2701 mRNA 0.47 14 65014291 65029795
Loading

Neighbor

gene id symbol gene type direction distance location
insig2 LOC104950207 coding upstream 99895 64908646 ~ 64914396 (+)
zgc:152951 glrx coding upstream 152317 64854740 ~ 64861974 (+)
LOC110520382 LOC106586539 coding upstream 631500 64380591 ~ 64382791 (+)
LOC110520383 LOC106586541 coding upstream 1039815 63972679 ~ 63974476 (+)
LOC110504443 fbxo47 coding upstream 1114098 63894665 ~ 63900193 (+)
steap3 LOC106586584 coding downstream 103474 65133269 ~ 65146515 (+)
LOC110520396 LOC100136409 coding downstream 131547 65161342 ~ 65166580 (+)
tmem37 tmem37 coding downstream 141834 65170904 ~ 65176413 (+)
LOC110520399 LOC106586589 coding downstream 162262 65192057 ~ 65212814 (+)
LOC118964311 LOC106586591 coding downstream 187262 65217057 ~ 65231345 (+)
G286546 en1 non-coding upstream 22171 64987750 ~ 64992120 (+)
G286535 NA non-coding upstream 33958 64979609 ~ 64980333 (+)
G286532 NA non-coding upstream 37599 64976468 ~ 64976692 (+)
G286508 NA non-coding upstream 53142 64960933 ~ 64961149 (+)
G286398 NA non-coding upstream 83176 64930527 ~ 64931115 (+)
G286631 NA non-coding downstream 59757 65089552 ~ 65090664 (+)
G286677 LOC106586564 non-coding downstream 76991 65106786 ~ 65108183 (+)
G286680 NA non-coding downstream 79986 65109781 ~ 65109981 (+)
G286681 NA non-coding downstream 80398 65110193 ~ 65110400 (+)
G286757 NA non-coding downstream 120918 65150713 ~ 65151016 (+)
G285763 NA other upstream 706931 64306512 ~ 64307360 (+)
G285203 NA other upstream 930309 64071432 ~ 64083982 (+)
G285001 NA other upstream 1268798 63743006 ~ 63745493 (+)
G284986 LOC106586530 other upstream 1292227 63706568 ~ 63722064 (+)
G284599 NA other upstream 1623007 63390931 ~ 63391284 (+)
G286679 NA other downstream 79461 65109256 ~ 65109637 (+)
zmym2 LOC106586592 other downstream 230650 65260200 ~ 65311166 (+)
LOC118964312 LOC106586611 other downstream 1004625 66027633 ~ 66036299 (+)
G288252 NA other downstream 1520027 66549822 ~ 66550487 (+)

Expression

marco(marco) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
End of interactive chart.

marco(marco) Expression in each Bioproject

Bar chart with 20 bars.
marco(marco) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network