XLOC_021712 (pkig)


Basic Information

Item Value
gene id XLOC_021712
gene name pkig
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 25879320 ~ 25942859 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043094
GTTTATCTTCGCAGGTGGTGTAAATCATCTTAAAATCATACGTACACAGTTAAAACACCAAAGTAATATCTTCTTTAAAGTATAATGCTTCCAGACGTGATTATTCTACTTAATTAGCTATGTATTCCTACAGCTGTGACTAAGTTGCCACATATTTATGATACAAACAACCACGCAAGTGTGGCGTTTTAGCGGAAACTGACGTTACCATGGCAATTTTGTAAAGGTATTCAGCAGGCGAATTCACCTACCTGCACGCCAGCTTGAAGACTTTTCAGAAACCTCcctaaacaaacattttcaataTACAAATTGTCTGCATTTTACCATACTAGAAGCTCCGCGTGAACAATGCCAAGTGCTGTTGTTGGTGAGAGAGCGGGCGGAGGGTGATTGGCTGTGGGATCTCTCCATTTTGGAAACAGCTGTTTAAAGCCCTGTCCCTCTTTCTCATTGTGTTAAACTGACTGTCAGAGGAGCGTTGGATTTGACTGGGAATCTCGGAACAGATCAATTGAAATCTATCAAATCGGTGCGGGAATGCGGGAAGAGCGCTTGGAAATGAAGGGGAATCCCGACAAAGAGTGAATGGCGTTGTAACAagtggaagaaagtgaagaggatCAAGGTGTAATGAGAGGGCCCTTTGTGAGTAGATGATGGACGTTGAGGCGTCATATTCAGAGTTCATAAACTGTGATCGTACAGGTCGCAGGAACGCTGTGCCGGACATTAAAGGAGAAGGAGGAGAGGGGGGGACCAGTGAACTTACCAAAGACATGGCTCAGATGGACCTGAAAGCTACAGAGGGAGATGCTTCTGGATCTCCAGCCCCAGAGGCAGAAGCATCTGGGAGCCAGGACAAACAGGGGACAGAGGGACCGTCataaaaaacaaatcaagaaTGACCCAGAGGAGAGAGGAAAGCTGGGGACTTCTCTTCTTTTTCTCATTGAAATTCTCCTCATCTTTGCTCATGGGGCAGCAATGAAGAGCTCCTCTCATAGACTGCCATTAAGGTGGACGTCCACCCATTGCATGCTGTTGAGTGCCTAAGAGACAGATGGAGAAGAAGACACTGCCTTCGCAAACACCACTAAATAGGACGAATCTGTCTAGGACTGTATTCATTCACAGCGCTGAGTGAGGgaagattgttttttttctaacagAAGTCCAACAGAAGCACAGGCGTTTTTGATATTTTTCCATCCTAAACGTAAAATAAACAGTCCAATCTTGAGTTACTGTTAAAGAAACACTCAGAGCTACTGTATACTATAAAGTACCAAATATAGCCTTTTTGTTACAGCCTATGacatggaattattattattattattttttaaaacaatgaccACTACAGTTAAAGGAGGTCTGGTTGTAAAACAGAATTCCCAAATATTGCCTGAGGTCAGAAGAGATTTCTTTCTATACTTCattatatactgtaaaacaaATGTAACATAATTAACGATATTTATGTAGTATCTTGAGTTCCCGCTTTCTGCTCCTGGcactgttttgtgtgtttttttttgtcaaacagaAACACTTGTTGAAACACATTGCATTTATATTGTGACTATAAATGTAAAGTACCTCAAAATAAACAGGAATGACATTA
>TCONS_00043095
TCTCATTGTGTTAAACTGACTGTCAGAGGAGCGTTGGATTTGACTGGGAATCTCGGAACAGATCAATTGAAATCTATCAAATCGGTGCGGGAATGCGGGAAGAGCGCTTGGAAATGAAGGGGAATCCCGACAAAGAGTGAATGGCGTTGTAACAagtggaagaaagtgaagaggatCAAGTCAGACCTCGGGTGCAGGAGAAGGACATAAACGACAAGGACAGACGTTCCACCTGCTTCCTGTTAAGGCCATGTGTTGTTTAATGCAAGAGCAGAACTGGATGTTTGTAGCAAGGTCCTGTCAAAGAGACAATATCCTGCCCTACAGagggatagttcagccagaaATGAAcagtttgtcattatttacttgccCTGCTGTGTCAATCCAAACTAtggtatgtttttttatattttacatggaTCTTTTCCTTAAGGTAATGTGACAATCTAAAGAATTTATGTTGCAGCTGTAATAACAGATGTAACCAATATGACGTCAAACTCGCCCATAAAATACTCAAGACATTTGATGTCAGATGTTATGACAGCAgtctatttttcattttaaagagcTACAGCTGAGGAGAATATGTCAGTGACTTATATTTTAGTCTGTTTTCGGAAACTTGGAATATGTAATGTTGAGTGAGTATTGACTATTTTTGGTGCTGTTATACTCATGTAATATATAGTAATGTTCTGAACaggtttttttttgccctcaagttcgagtcatttgattttgaataTCTACCGATCGATACttcaataatatataaaaacaataaaaaaa
>TCONS_00043096
agacagaaagacagagaaTGAGAGGAGGCTCTCTCATAAACACCAGGATCACAGGACACCGCTTTCTGCTTCTTGCATGGACTAAaataaaactgcctttattcgaGCCCTCGGAGAGCTTTGTAGCAGCATGTCATTATTGCTCGGAGTGTGTTCGGTGTAATGAGAGGGCCCTTTGTGAGTAGATGATGGACGTTGAGGCGTCATATTCAGAGTTCATAAACTGTGATCGTACAGGTCGCAGGAACGCTGTGCCGGACATTAAAGGAGAAGGAGGAGAGGGGGGGACCAGTGAACTTACCAAAGACATGGCTCAGATGGACCTGAAAGCTACAGAGGGAGATGCTTCTGGATCTCCAGCCCCAGAGGCAGAAGCATCTGGGAGCCAGGACAAACAGGGGACAGAGGGACCGTCataaaaaacaaatcaagaaTGACCCAGAGGAGAGAGGAAAGCTGGGGACTTCTCTTCTTTTTCTCATTGAAATTCTCCTCATCTTTGCTCATGGGGCAGCAATGAAGAGCTCCTCTCATAGACTGCCATTAAGGTGGACGTCCACCCATTGCATGCTGTTGAGTGCCTAAGAGACAGATGGAGAAGAAGACACTGCCTTCGCAAACACCACTAAATAGGACGAATCTGTCTAGGACTGTATTCATTCACAGCGCTGAGTGAGGgaagattgttttttttctaacagAAGTCCAACAGAAGCACAGGCGTTTTTGATATTTTTCCATCCTAAACGTAAAATAAACAGTCCAATCTTGAGTTACTGTTAAAGAAACACTCAGAGCTACTGTATACTATAAAGTACCAAATATAGCCTTTTTGTTACAGCCTATGacatggaattattattattattattttttaaaacaatgaccACTACAGTTAAAGGAGGTCTGGTTGTAAAACAGAATTCCCAAATATTGCCTGAGGTCAGAAGAGATTTCTTTCTATACTTCattatatactgtaaaacaaATGTAACATAATTAACGATATTTATGTAGTATCTTGAGTTCCCGCTTTCTGCTCCTGGcactgttttgtgtgtttttttttgtcaaacagaAACACTTGTTGAAACACATTGCATTTATATTGTGACTATAAATGTAAAGTACCTCAAAATAAACAGGAATGACATTA

Function

symbol description
pkig Predicted to enable cAMP-dependent protein kinase inhibitor activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within negative regulation of protein kinase activity. Predicted to be active in cytoplasm and nucleus. Orthologous to human PKIG (cAMP-dependent protein kinase inhibitor gamma).

GO:

id name namespace
GO:2000480 negative regulation of cAMP-dependent protein kinase activity biological_process
GO:0006469 negative regulation of protein kinase activity biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004862 cAMP-dependent protein kinase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050302-97 Predicted to enable cAMP-dependent protein kinase inhibitor activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within negative regulation of protein kinase activity. Predicted to be active in cytoplasm and nucleus. Orthologous to human PKIG (cAMP-dependent protein kinase inhibitor gamma).

Ensembl:

ensembl_id ENSDARG00000086471

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043094 False 1627 mRNA 0.41 3 25879320 25942859
TCONS_00043095 False 795 processed_transcript 0.38 2 25879768 25897009
TCONS_00043096 True 1156 mRNA 0.41 3 25893020 25942859

Neighbor

gene id symbol gene type direction distance location
XLOC_021711 ttpal coding upstream 4443 25868637 ~ 25874877 (+)
XLOC_021710 hnf4a coding upstream 13464 25832689 ~ 25865856 (+)
XLOC_021709 r3hdml coding upstream 51950 25821055 ~ 25827370 (+)
XLOC_021708 rbms2b coding upstream 110555 25708787 ~ 25768765 (+)
XLOC_021707 fmnl3 coding upstream 430448 25354856 ~ 25448872 (+)
XLOC_021713 ccn5 coding downstream 50827 25993686 ~ 26003858 (+)
XLOC_021714 AL845287.1 coding downstream 52168 25995027 ~ 25995141 (+)
XLOC_021715 si:dkey-78k11.9 coding downstream 66407 26009266 ~ 26010376 (+)
XLOC_021716 pfkfb1 coding downstream 74368 26017227 ~ 26037969 (+)
XLOC_021717 itih6 coding downstream 96665 26039524 ~ 26056072 (+)
XLOC_021691 BX957326.2 non-coding upstream 1318447 24556455 ~ 24560873 (+)
XLOC_021689 NA non-coding upstream 1387283 24483312 ~ 24492037 (+)
XLOC_021687 CR925709.3 non-coding upstream 1730549 24148055 ~ 24148771 (+)
XLOC_021686 NA non-coding upstream 1738910 24133781 ~ 24140410 (+)
XLOC_021683 dre-mir-7149 non-coding upstream 1805165 24074083 ~ 24074155 (+)
XLOC_021722 NA non-coding downstream 648265 26591124 ~ 26625133 (+)
XLOC_021724 CT573349.1 non-coding downstream 985884 26928743 ~ 26928858 (+)
XLOC_021731 NA non-coding downstream 1566008 27508867 ~ 27516273 (+)
XLOC_021738 NA non-coding downstream 1927880 27870739 ~ 27872705 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G17334 NA unknown CI01000001 null 9418328 ~ 9438063 (+)
striped catfish (Pangasianodon hypophthalmus) pkig NA misc NC_047610.1 CM018556.1 19198426 ~ 19222559 (+)
mexican tetra (Astyanax mexicanus) G14506 NA non-coding NC_035898.1 CM008301.1 29730164 ~ 29730572 (+)