LOC118964311 (LOC106586591)


Basic Information

Item Value
gene id LOC118964311
gene name LOC106586591
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65217057 ~ 65231345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974928.1
TCTTGATCTGGCAACCCTGGGCGCATGCTATCCTCGATTTATCTCAGGGCACAACAGTGGCGCTAGCTATATCGTTTCAAGTTCTACTCCTCCGgtgcAGATGGTAGCAGCCTAAATGATGGATGGGGAACACCAGGAAGAGAATCCTTTACACGAGAAAGGAAATCCTCTACACAATGAAGAGAAGACTTCAAGTGATGTGGAGAAGACTTTATATGACATGGAGAGAGCTTTATGTGACATAAAAAATAGTGCTGAAGAGAACAGTTCAAGTGATGATAACAGTTCAGGTGATGAAGTAGAAGAACAAAGACTGGATTCAAACCTCCCAAGTGGTTCAGATCCTCTTCCATCTAATGCAGAAAGCCCCTGCGATAATAGTGAATCTGAGCCGTCCCCCCAAAAAGCAGCACAAGCTAAAAAAACTTGCCTCAAGAAGTTTGCGCCACGGAAAGGCACAAGGTCAAGCCTACGTTCCAGCACAAAATTGACAGTCAGTGCATGTGATACGACAGATGATGGTAAAAGAAAATTGGACAAAAAGCACTTCTGCCTGTATTGCAGTGAACCACACCACAACATTGCAAGACATTTAGAAAGGATGCACGCAGAAGAAGCAGCTGTTGGTCATGCTATCAGCTTCCCAAAACTCTCCAAAATCAGGTCTCTGTTGCTTGACCAACTCCGTAACAAAGGCAACTATCAACACAACTTTGAAGTTCTTCAAAGTGGAGCTGGGGAAATTGTGAGAAAGTGTAGACCATCTAACGATGGCGTTTCTGTGCGTGACTGCCTGCCCTGCCAACACTGCTTAGCTTTTTTCTCCAAAATTGATTTATGGAAGCATGAGAGCTCATGTAATGCCAGAAAAGGACAAGATGAAATGAGGGGAGGAAAAAGAGTGAGGATCCAGGCTGCGTCCTCTCAACTTGTTCCATTGCCTGTCTATTCTACTGGAGGATATGAAGAAATAATACACAATATGAATCAAGATGACATCTCATGCCACATCAAAAATGATCCCCTCATATGTAAATATGGCAATGCACTATCTGCAAAGCATGGTCATGCCAAGTCACAGTTTACTTACATTGGTTCAAAAATGAGGGAATTGGCTAGATTTGTACTTGCTGTAAATGAGATGGACTGTGGTGTTCAATATCTGCATGAAGTATGTGTACCATCCAAATTCAAATTGGCCGTTCATGCTGCCAGGAAAATGAGTGGTCATGACCCTGCCTCCGACAGGTACAAGACCCCATCTCTTGCTTTAAAGATTGGCTATTCCTTGAAAAGAGCTACCGAAATAGCTTTTGGGGAGAGTCGTATGACAGAGAACCGTGAGGCAGAGGAACAAGCCAAAAGGTTCATTGAACTTCTTGAAAACGATTGGAATAACTGTTTTTCCGGTCTATCCCTCAGCGCTGTCCCTCAGTGTGATGAAGTTGATGTGTCTTCACTAACTGAGGATTTGATCAAACTTCAGAAGTTTCTCAAGGTTGCAGAGGACACAGCGAAGAAAGAATTGCTGGAGAACCCCACCAACACTGTCTGGAAAAAGCTCAATGAAACTCTTCTTGCAGAAATAGCTCTCTTCAACAGAAAAAGGACAGGCGAAGTTGCGAAAATGCTGTTGGAAACATACACAAACAGGAAGAAATCTCCAGCTAGTGCAGACATTTTCAATAACCTCTCAAGGCTGGAGCAGGAGCTTGGAGACGACAAATTAACCAGGTTGGAAATAGAAGGCAAAAATGGTAGGAAAATGCCAGTCCTACTAACGGAGAGGATGATCTCATCTCTTGAGATCCTTATTGCAAACAGAGACAAAGTTGGTGTGTCAAAGGACAACCCTTATGTCTTTGCACGTAGCCTGGATGCAGCAAGCTACATCAGAGGGTTTGACTGTCTGAGGAAGTGTGCACATGAGTGTGATGCAAAGAATCCTGAAAGTCTGATCCATGCGACAGTGAGGAAAGAGGTTGCTATCCATTGCCAACTACTAAACTTGAATGAAAGTGAATTGGATCAGGTGGCAAAGTTATTGGGACATGACACCCAGGTCCATAAAGAGTACTACAGGCTCTCTGAAAATGCTGCACATCTAGCAGAAATCAGCAAACTGCTGCTTGCAATGGATCAGGTTTCAGTGGTAATTCCAGGGCCATCTGAGGAAAGGGTTGTTTCTCCTACATATGGGACATCTTCTGCAGGGACATACCCAGCTGGGACAGATACTGGAAGGACATATCCTACCGAGACATGTCCTACTGGGTCATCATATCCTACAGAGACATATTCAGCGAAGTCATATACTGTGGAGGCACAGCCTTCAAGGTCATATCATGCTGGGACATATCCTGAGAAGTCATATCCTTCAGGATCACATTCTGCGAGGTCATATTCTGCAGGGAAAGATTCTGCGAGAGCATATCCTACCGTGACACATCCTGCAGGGACCGATCCAGCAGGTTCATATGTTGCAGGGACATATACTGCAGGCACTCACCATGCAAGATCATATCCTGCAAGTCCTTATGGCCTTTCATCTCCTGCAACATCATATGCTTCGGGGACTAATCCTGCAAGTTCATATCCTGCACAAACACTTCCAGCGCGTACAGTTATTACGCCAACACTTCATGCACAGACACTTCCTGTCAGGACAGTTCCTGCGAGGACAAGTCCTGTGAGGCCGTGGAGTGATGCGGCTAAGGCTGCGGTAAAGCGTCAGTTGGGACACTTTATCTCAATGATGAAGGTTCCAGGTAAACGGGACTGTGAAGTATGCCTCCACAATGAACCAGCTGTACGAGACAGGACATGGAGAGACATCAAAAACTATGTGCACAACACAGTAAAATCTATTAAAAGGAAGAAGGGCCGTACAGGAGTGGACCCCAGAAAATGGACAAAGAAAGAATCGGCAAAGATTGCTAAGGAAGAGGTTGGTGGAACAAGGACTGTACCTGCACAGAGTGAAGACGAGAGACTAGAGGCAGGTCCTGTTGCTGTGACAACACAAAGGAAGCAGAAGATATGGAGTGATGAGGCTCAGGCTGCGGTCAGGCGGCAGCTAGGAGACTTCACTAAACTGATGAAGATTCCAGGTAAAACGGAATGTGATGCATGTATTGCAGCTGAACCAGTTCTACAAGGCAGGACATGGAAAGATGTAAAAAACTATGTGCATAACACATTAATGACAATGTGCAGGAGGCATATTTCAGGCAAGCAAAACATGGACCATGAAAAACAAAGTCCAGGGACACAGAAACCAGGGATGCAACAGAAACCAAAGGTGCCGTTGGGACTTCCAGAAGATCTTCCTGTTTATCTGTACTTATGATTTCTTTGAACTAGTTTCAACACTTTTGATTTAATCTGACCATCTTTGCTCTCTCTGATCTGAGATTGTAAAGCAATAATTATAATTATGTAGCATTTTTATAATGTCACAACCTACTTTTTTCTACCTACGTATCCGTTAGGCCTGGGAATTGCTAGGGACCTAACAATACGATTTTATCACAATACTTTGGTgccaatactatatatatatatatatatatatatatatacatgtgtatatatattgcgattctcacgattctataagGACTACGATTCGATACtttgattttattgcgatttgatgtttcaaacatattgctcaccatgtctgctgcagagggacaggagagagacatgagaaaacgAGTTTTGTTCAGTCATGGAAGTAAGTGCTGAGAACATGTTGGCCCCCCATCTAAAAATAAGTTGGAGAACAAGGTAGAGAATAAAAAATACTGGACCTTTTggcgcaggtacagccaactagcgctagctacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtg
>XM_036974929.1
CAGACGTTTATTCCAATTTTACGGTTAATTAGTCAACGTTACAACATGTGCTTAGGTGTTAGCTCCCTCGAGTCGCTGTATTATGAAGTCAACATTTGTTTATCTCCTTTTCTGGCCTGCGGTGGGAGGGTACTATATTACCAAATATTTTTACAACTAACCCTTATTGTTCTATCTGTGACATTCCCCTGCTCTCGCATTGTTTCGCTCGCTCTCTAATGTCGGACGTGAGGCAGTGCTGCTTGCTGACGGAatggagtggtggtgggggtgttaTTTTAGCCCCCTCAGgtgcAGATGGTAGCAGCCTAAATGATGGATGGGGAACACCAGGAAGAGAATCCTTTACACGAGAAAGGAAATCCTCTACACAATGAAGAGAAGACTTCAAGTGATGTGGAGAAGACTTTATATGACATGGAGAGAGCTTTATGTGACATAAAAAATAGTGCTGAAGAGAACAGTTCAAGTGATGATAACAGTTCAGGTGATGAAGTAGAAGAACAAAGACTGGATTCAAACCTCCCAAGTGGTTCAGATCCTCTTCCATCTAATGCAGAAAGCCCCTGCGATAATAGTGAATCTGAGCCGTCCCCCCAAAAAGCAGCACAAGCTAAAAAAACTTGCCTCAAGAAGTTTGCGCCACGGAAAGGCACAAGGTCAAGCCTACGTTCCAGCACAAAATTGACAGTCAGTGCATGTGATACGACAGATGATGGTAAAAGAAAATTGGACAAAAAGCACTTCTGCCTGTATTGCAGTGAACCACACCACAACATTGCAAGACATTTAGAAAGGATGCACGCAGAAGAAGCAGCTGTTGGTCATGCTATCAGCTTCCCAAAACTCTCCAAAATCAGGTCTCTGTTGCTTGACCAACTCCGTAACAAAGGCAACTATCAACACAACTTTGAAGTTCTTCAAAGTGGAGCTGGGGAAATTGTGAGAAAGTGTAGACCATCTAACGATGGCGTTTCTGTGCGTGACTGCCTGCCCTGCCAACACTGCTTAGCTTTTTTCTCCAAAATTGATTTATGGAAGCATGAGAGCTCATGTAATGCCAGAAAAGGACAAGATGAAATGAGGGGAGGAAAAAGAGTGAGGATCCAGGCTGCGTCCTCTCAACTTGTTCCATTGCCTGTCTATTCTACTGGAGGATATGAAGAAATAATACACAATATGAATCAAGATGACATCTCATGCCACATCAAAAATGATCCCCTCATATGTAAATATGGCAATGCACTATCTGCAAAGCATGGTCATGCCAAGTCACAGTTTACTTACATTGGTTCAAAAATGAGGGAATTGGCTAGATTTGTACTTGCTGTAAATGAGATGGACTGTGGTGTTCAATATCTGCATGAAGTATGTGTACCATCCAAATTCAAATTGGCCGTTCATGCTGCCAGGAAAATGAGTGGTCATGACCCTGCCTCCGACAGGTACAAGACCCCATCTCTTGCTTTAAAGATTGGCTATTCCTTGAAAAGAGCTACCGAAATAGCTTTTGGGGAGAGTCGTATGACAGAGAACCGTGAGGCAGAGGAACAAGCCAAAAGGTTCATTGAACTTCTTGAAAACGATTGGAATAACTGTTTTTCCGGTCTATCCCTCAGCGCTGTCCCTCAGTGTGATGAAGTTGATGTGTCTTCACTAACTGAGGATTTGATCAAACTTCAGAAGTTTCTCAAGGTTGCAGAGGACACAGCGAAGAAAGAATTGCTGGAGAACCCCACCAACACTGTCTGGAAAAAGCTCAATGAAACTCTTCTTGCAGAAATAGCTCTCTTCAACAGAAAAAGGACAGGCGAAGTTGCGAAAATGCTGTTGGAAACATACACAAACAGGAAGAAATCTCCAGCTAGTGCAGACATTTTCAATAACCTCTCAAGGCTGGAGCAGGAGCTTGGAGACGACAAATTAACCAGGTTGGAAATAGAAGGCAAAAATGGTAGGAAAATGCCAGTCCTACTAACGGAGAGGATGATCTCATCTCTTGAGATCCTTATTGCAAACAGAGACAAAGTTGGTGTGTCAAAGGACAACCCTTATGTCTTTGCACGTAGCCTGGATGCAGCAAGCTACATCAGAGGGTTTGACTGTCTGAGGAAGTGTGCACATGAGTGTGATGCAAAGAATCCTGAAAGTCTGATCCATGCGACAGTGAGGAAAGAGGTTGCTATCCATTGCCAACTACTAAACTTGAATGAAAGTGAATTGGATCAGGTGGCAAAGTTATTGGGACATGACACCCAGGTCCATAAAGAGTACTACAGGCTCTCTGAAAATGCTGCACATCTAGCAGAAATCAGCAAACTGCTGCTTGCAATGGATCAGGTTTCAGTGGTAATTCCAGGGCCATCTGAGGAAAGGGTTGTTTCTCCTACATATGGGACATCTTCTGCAGGGACATACCCAGCTGGGACAGATACTGGAAGGACATATCCTACCGAGACATGTCCTACTGGGTCATCATATCCTACAGAGACATATTCAGCGAAGTCATATACTGTGGAGGCACAGCCTTCAAGGTCATATCATGCTGGGACATATCCTGAGAAGTCATATCCTTCAGGATCACATTCTGCGAGGTCATATTCTGCAGGGAAAGATTCTGCGAGAGCATATCCTACCGTGACACATCCTGCAGGGACCGATCCAGCAGGTTCATATGTTGCAGGGACATATACTGCAGGCACTCACCATGCAAGATCATATCCTGCAAGTCCTTATGGCCTTTCATCTCCTGCAACATCATATGCTTCGGGGACTAATCCTGCAAGTTCATATCCTGCACAAACACTTCCAGCGCGTACAGTTATTACGCCAACACTTCATGCACAGACACTTCCTGTCAGGACAGTTCCTGCGAGGACAAGTCCTGTGAGGCCGTGGAGTGATGCGGCTAAGGCTGCGGTAAAGCGTCAGTTGGGACACTTTATCTCAATGATGAAGGTTCCAGGTAAACGGGACTGTGAAGTATGCCTCCACAATGAACCAGCTGTACGAGACAGGACATGGAGAGACATCAAAAACTATGTGCACAACACAGTAAAATCTATTAAAAGGAAGAAGGGCCGTACAGGAGTGGACCCCAGAAAATGGACAAAGAAAGAATCGGCAAAGATTGCTAAGGAAGAGGTTGGTGGAACAAGGACTGTACCTGCACAGAGTGAAGACGAGAGACTAGAGGCAGGTCCTGTTGCTGTGACAACACAAAGGAAGCAGAAGATATGGAGTGATGAGGCTCAGGCTGCGGTCAGGCGGCAGCTAGGAGACTTCACTAAACTGATGAAGATTCCAGGTAAAACGGAATGTGATGCATGTATTGCAGCTGAACCAGTTCTACAAGGCAGGACATGGAAAGATGTAAAAAACTATGTGCATAACACATTAATGACAATGTGCAGGAGGCATATTTCAGGCAAGCAAAACATGGACCATGAAAAACAAAGTCCAGGGACACAGAAACCAGGGATGCAACAGAAACCAAAGGTGCCGTTGGGACTTCCAGAAGATCTTCCTGTTTATCTGTACTTATGATTTCTTTGAACTAGTTTCAACACTTTTGATTTAATCTGACCATCTTTGCTCTCTCTGATCTGAGATTGTAAAGCAATAATTATAATTATGTAGCATTTTTATAATGTCACAACCTACTTTTTTCTACCTACGTATCCGTTAGGCCTGGGAATTGCTAGGGACCTAACAATACGATTTTATCACAATACTTTGGTgccaatactatatatatatatatatatatatatatatacatgtgtatatatattgcgattctcacgattctataagGACTACGATTCGATACtttgattttattgcgatttgatgtttcaaacatattgctcaccatgtctgctgcagagggacaggagagagacatgagaaaacgAGTTTTGTTCAGTCATGGAAGTAAGTGCTGAGAACATGTTGGCCCCCCATCTAAAAATAAGTTGGAGAACAAGGTAGAGAATAAAAAATACTGGACCTTTTggcgcaggtacagccaactagcgctagctacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtg

Function

NR:

description
uncharacterized protein LOC109869147

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974928.1 False 3947 mRNA 0.44 3 65217057 65231345
XM_036974929.1 True 4144 mRNA 0.44 3 65217161 65231345

Neighbor

gene id symbol gene type direction distance location
LOC110520399 LOC106586589 coding upstream 4243 65192057 ~ 65212814 (+)
tmem37 tmem37 coding upstream 42721 65170904 ~ 65176413 (+)
LOC110520396 LOC100136409 coding upstream 50477 65161342 ~ 65166580 (+)
steap3 LOC106586584 coding upstream 70542 65133269 ~ 65146515 (+)
marco marco coding upstream 187262 65014291 ~ 65029795 (+)
LOC110520400 NA coding downstream 9945 65241290 ~ 65242647 (+)
zmym2 LOC106586592 coding downstream 28855 65260200 ~ 65311166 (+)
ift88 ift88 coding downstream 131391 65362736 ~ 65386706 (+)
LOC110520411 NA coding downstream 257861 65489157 ~ 65491432 (+)
popdc2 popdc2 coding downstream 260614 65491959 ~ 65503791 (+)
G286772 NA non-coding upstream 1232 65215426 ~ 65215825 (+)
G286769 NA non-coding upstream 29803 65186980 ~ 65187254 (+)
G286765 NA non-coding upstream 34958 65181882 ~ 65182099 (+)
G286737 NA non-coding upstream 46455 65169865 ~ 65170602 (+)
G286734 NA non-coding downstream 125 65231470 ~ 65231851 (+)
G286739 NA non-coding downstream 877 65232222 ~ 65232614 (+)
G286775 LOC107756720 non-coding downstream 3469 65234814 ~ 65235740 (+)
G286777 NA non-coding downstream 19738 65251083 ~ 65251369 (+)
G286790 NA non-coding downstream 60121 65291466 ~ 65334118 (+)
G286679 NA other upstream 107420 65109256 ~ 65109637 (+)
G285763 NA other upstream 909697 64306512 ~ 64307360 (+)
G285203 NA other upstream 1133075 64071432 ~ 64083982 (+)
G285001 NA other upstream 1471564 63743006 ~ 63745493 (+)
LOC118964312 LOC106586611 other downstream 803075 66027633 ~ 66036299 (+)
G288252 NA other downstream 1318477 66549822 ~ 66550487 (+)
G288430 NA other downstream 1499941 66731286 ~ 66733797 (+)
LOC110505407 LOC106586622 other downstream 1552028 66783373 ~ 66787442 (+)

Expression


Co-expression Network