cryl1


Basic Information

Item Value
gene id cryl1
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65330832 ~ 65362601 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974947.1
agtgttttctttattttgaaggTTACCTGTGTCTTGCTTTCAACAAGCTTTCACACACCACTGAAACAACACACATTTAGTTCCTCATACCACAGGCCTCACCATAGAGCTACCGGGAAGATATATTATTTACATAAAAAGGAAACAGCTTGAAGATCTGCAGGAAGAGTGCATGCTGAGGGGGGATCGAAGTGCCTCAGAGCAGCTAGCCCTACTGAGCAGCCACAATGACCTCTGCCAGGCACTAGAGGGAGCCTTCTTCGTCCAGgaGTGTGTCTTTGAGGAGATCGAGGCCAAGCGGAGTGTCTTCCAGGTGGTGGAGAGTCATGTGGGAGAGGGGGTGATCCTCAGTAGCTCCACCTCCTGCCTGTTGCCTAGCAACATCTTCTCCCAGGTCCAGAACCGAAAGCGCTGCATTATATCTCACCCGGTGAACCCGCCCTACTACGTGCGTCTGGTGGAGCTGGTGCCACACCCAGAGACGTTGGCGGGGGTGATGGACACTACCCACGCCCTGATGACTGCCGTAGGCCAGGCTCCCGTCAGGCTGAAGAAAGAGATTGACGGCTTCGCCCTAAACCGTGTGCAGTACGCCATCATCGCCGAGTCCTGGAGGCTGGTCAAGGACGGTGTCATTTCAGTCAAGGACATTGACCTGGTGATGTCAGAGGGGCTGGGAATGCGTTACGCTTTTATTGGTCCCATGGAAACCATGCACCTCAACGCACCTGAAGGTCTGGAGGACTATCTCCAGCGCTACAGAGAGGGCATGAAGAGGGTTCTGAACAACTTTGGACCTGTTCCCGAATTCTCTGGGGAGGCAGCCGAGCGCATCAACAAAGAGATGTGTGAGCTGATCCCAGCTGACCAGCAGCACCTGtctgccaggagagagagaagggaccaGCTTCTCATGGGCCTGGCCAAGCTCAAGAAGTGACCCCAGGACTATCACCACCACTGATGAACAGGGTGGGCTGAGGTCTGGGACTCTGCTGTCCATCACTCAGCCAAAGAGCATGGTGATGAGGATGATCTGATCTCTCAGTAGTGCCTACACTGGGGATGTTACTGAATACTGTAGCCCTGAGTCCTCACACACAATCAACCATTCTGGGATGATACTATAGCCCTCACACACAATAAAGCAATCTAGGGATTGATTCCCATGCCATCTCAGAAATCTGGCCACCACATGTTTTATGCAATCAACACGTTGATCAGACAAGGGAATTATTGGTTTAGTCATACCACACTGGCTTCTTGAATTATGAATATGAAAAGTTAATGTCAAAACCTTATGGGAGATTTCTTTATTAAAATGTTGAATTTC
>XM_021597697.2
aacaaataaaatgTTCTCAGCTTAGAATGTAAAAAGTAACGCTATAGCTAAACAAGACCATCACCACATGATTAATAAAATAATGCAAATCGGTGAATGTACATTTTCATGATTCATTTTCTTCGCTCGTTTTATTTGTAACATTTTGGAGCACCGTACAATCATGTGACTAGTAGGGGCGTTGCAGGATTTGCAGGCAGAGTATTCTTGGAAAAACAGTTACTGTTTTCAATGTTGCAATAACTTCCTGCTAATCAAAACTGCAAAATGAGTTCCTCTGAGGAGAAGACCATTACCGTTATTGGCAGTGGGCTGATTGGGCGCTCCTGGGCCATGGTGTTTATAAGTGGGGGCTACAGAGTGAAGATCTATGACAACCAGCCAGGCCATGCTGCCAGGGCCATCCAGGAGGTCAGGAAACAGCTTGAAGATCTGCAGGAAGAGTGCATGCTGAGGGGGGATCGAAGTGCCTCAGAGCAGCTAGCCCTACTGAGCAGCCACAATGACCTCTGCCAGGCACTAGAGGGAGCCTTCTTCGTCCAGgaGTGTGTCTTTGAGGAGATCGAGGCCAAGCGGAGTGTCTTCCAGGTGGTGGAGAGTCATGTGGGAGAGGGGGTGATCCTCAGTAGCTCCACCTCCTGCCTGTTGCCTAGCAACATCTTCTCCCAGGTCCAGAACCGAAAGCGCTGCATTATATCTCACCCGGTGAACCCGCCCTACTACGTGCGTCTGGTGGAGCTGGTGCCACACCCAGAGACGTTGGCGGGGGTGATGGACACTACCCACGCCCTGATGACTGCCGTAGGCCAGGCTCCCGTCAGGCTGAAGAAAGAGATTGACGGCTTCGCCCTAAACCGTGTGCAGTACGCCATCATCGCCGAGTCCTGGAGGCTGGTCAAGGACGGTGTCATTTCAGTCAAGGACATTGACCTGGTGATGTCAGAGGGGCTGGGAATGCGTTACGCTTTTATTGGTCCCATGGAAACCATGCACCTCAACGCACCTGAAGGTCTGGAGGACTATCTCCAGCGCTACAGAGAGGGCATGAAGAGGGTTCTGAACAACTTTGGACCTGTTCCCGAATTCTCTGGGGAGGCAGCCGAGCGCATCAACAAAGAGATGTGTGAGCTGATCCCAGCTGACCAGCAGCACCTGtctgccaggagagagagaagggaccaGCTTCTCATGGGCCTGGCCAAGCTCAAGAAGTGACCCCAGGACTATCACCACCACTGATGAACAGGGTGGGCTGAGGTCTGGGACTCTGCTGTCCATCACTCAGCCAAAGAGCATGGTGATGAGGATGATCTGATCTCTCAGTAGTGCCTACACTGGGGATGTTACTGAATACTGTAGCCCTGAGTCCTCACACACAATCAACCATTCTGGGATGATACTATAGCCCTCACACACAATAAAGCAATCTAGGGATTGATTCCCATGCCATCTCAGAAATCTGGCCACCACATGTTTTATGCAATCAACACGTTGATCAGACAAGGGAATTATTGGTTTAGTCATACCACACTGGCTTCTTGAATTATGAATATGAAAAGTTAATGTCAAAACCTTATGGGAGATTTCTTTATTAAAATGTTGAATTTC
>XM_021597698.2
caacaacaacaaataaaatgTTCTCAGCTTAGAATGTAAAAAGTAACGCTATAGCTAAACAAGACCATCACCACATGATTAATAAAATAATGCAAATCGGTGAATGTACATTTTCATGATTCATTTTCTTCGCTCGTTTTATTTGTAACATTTTGGAGCACCGTACAATCATGTGACTAGTAGGGGCGTTGCAGGATTTGCAGGCAGAGTATTCTTGGAAAAACAGTTACTGTTTTCAATGTTGCAATAACTTCCTGCTAATCAAAACTGCAAAATGAGTTCCTCTGAGGAGAAGACCATTACCGTTATTGGCAGTGGGCTGATTGGGCGCTCCTGGGCCATGGTGTTTATAAGTGGGGGCTACAGAGTGAAGATCTATGACAACCAGCCAGGCCATGCTGCCAGGGCCATCCAGGAGGTCAGGAAACAGCTTGAAGATCTGCAGGAAGAGTGCATGCTGAGGGGGGATCGAAGTGCCTCAGAGCAGCTAGCCCTACTGAGCAGCCACAATGACCTCTGCCAGGCACTAGAGGGAGCCTTCTTCGTCCAGGTGAACCCGCCCTACTACGTGCGTCTGGTGGAGCTGGTGCCACACCCAGAGACGTTGGCGGGGGTGATGGACACTACCCACGCCCTGATGACTGCCGTAGGCCAGGCTCCCGTCAGGCTGAAGAAAGAGATTGACGGCTTCGCCCTAAACCGTGTGCAGTACGCCATCATCGCCGAGTCCTGGAGGCTGGTCAAGGACGGTGTCATTTCAGTCAAGGACATTGACCTGGTGATGTCAGAGGGGCTGGGAATGCGTTACGCTTTTATTGGTCCCATGGAAACCATGCACCTCAACGCACCTGAAGGTCTGGAGGACTATCTCCAGCGCTACAGAGAGGGCATGAAGAGGGTTCTGAACAACTTTGGACCTGTTCCCGAATTCTCTGGGGAGGCAGCCGAGCGCATCAACAAAGAGATGTGTGAGCTGATCCCAGCTGACCAGCAGCACCTGtctgccaggagagagagaagggaccaGCTTCTCATGGGCCTGGCCAAGCTCAAGAAGTGACCCCAGGACTATCACCACCACTGATGAACAGGGTGGGCTGAGGTCTGGGACTCTGCTGTCCATCACTCAGCCAAAGAGCATGGTGATGAGGATGATCTGATCTCTCAGTAGTGCCTACACTGGGGATGTTACTGAATACTGTAGCCCTGAGTCCTCACACACAATCAACCATTCTGGGATGATACTATAGCCCTCACACACAATAAAGCAATCTAGGGATTGATTCCCATGCCATCTCAGAAATCTGGCCACCACATGTTTTATGCAATCAACACGTTGATCAGACAAGGGAATTATTGGTTTAGTCATACCACACTGGCTTCTTGAATTATGAATATGAAAAGTTAATGTCAAAACCTTATGGGAGATTTCTTTATTAAAATGTTGAATTTC

Function

NR:

description
lambda-crystallin homolog isoform X2

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0070403 NAD+ binding molecular_function
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity molecular_function

KEGG:

id description
K13247 CRYL1; L-gulonate 3-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974947.1 False 1333 mRNA 0.51 7 65330832 65357384
XM_021597697.2 False 1608 mRNA 0.50 8 65330832 65362594
XM_021597698.2 True 1453 mRNA 0.49 7 65330832 65362601

Neighbor

gene id symbol gene type direction distance location
gjb8 cxb6 coding downstream 303 65326162 ~ 65330529 (-)
LOC110520402 gja3 coding downstream 4818 65320894 ~ 65326014 (-)
LOC110520397 sctr coding downstream 148178 65173958 ~ 65182654 (-)
c3h2orf76 cssa25h2orf76 coding downstream 180661 65146520 ~ 65150171 (-)
c1ql2 LOC106586564 coding downstream 222033 65106729 ~ 65108799 (-)
eef1akmt1 eef1akmt1 coding upstream 24922 65387523 ~ 65390331 (-)
xpo4 xpo4 coding upstream 30248 65392849 ~ 65432153 (-)
LOC110520406 LOC106586596 coding upstream 74962 65437563 ~ 65459000 (-)
ska3 ska3 coding upstream 109684 65472285 ~ 65476510 (-)
hcn5 LOC106586566 coding upstream 117539 65480140 ~ 65484785 (-)
G286979 NA non-coding downstream 26334 65290732 ~ 65304498 (-)
G286986 NA non-coding downstream 29908 65300694 ~ 65300924 (-)
G286961 NA non-coding downstream 78044 65251989 ~ 65252788 (-)
G286960 NA non-coding downstream 78983 65251643 ~ 65251849 (-)
G286959 NA non-coding downstream 80334 65250231 ~ 65250498 (-)
G287041 NA non-coding upstream 83478 65446079 ~ 65446302 (-)
G287043 NA non-coding upstream 85467 65448068 ~ 65448417 (-)
G287067 NA non-coding upstream 164347 65526948 ~ 65532451 (-)
G287081 NA non-coding upstream 191929 65554530 ~ 65554731 (-)
G287083 NA non-coding upstream 193826 65556427 ~ 65556658 (-)
G286985 LOC106586592 other downstream 30415 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 94924 65235180 ~ 65235908 (-)
G286638 NA other downstream 254847 65054700 ~ 65075985 (-)
G286580 marco other downstream 301096 65014259 ~ 65029736 (-)
G286522 NA other downstream 360077 64969549 ~ 64970755 (-)
G287042 NA other upstream 84224 65446825 ~ 65447283 (-)
G287112 NA other upstream 217190 65579791 ~ 65580495 (-)
G288578 NA other upstream 1480070 66842671 ~ 66842881 (-)
G289678 NA other upstream 2264231 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 2521151 67883752 ~ 67886232 (-)

Expression


Co-expression Network