xpo4 (xpo4)


Basic Information

Item Value
gene id xpo4
gene name xpo4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65392849 ~ 65432153 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036974949.1
GAGGGACCATGATGGCGGCGGTCGGTTCACCAGAAGTGATTTCACAGCTGGAAAGCGCTGCCAAAGTTTTAATGgcaCCGCCGTCCATGGTCAATGCAGAGCAGAGGCAGCATGCAGAGCACATATTCCTCTCCTTCAGGAAGTCTAAATCACCCTTCGCTGTCTGCAAGCACATCTTAGAGACCAGTAAGGTAGACTATGTGCTGTTCCAGGCTGCCACAGCCGTCATGGAGGCGGTGGTACGGGAGTGGATCCTGCTGGAGAAGGCCAGCATCGAGTCGCTCCGAACATTCCTCCTCACCTACGTCTTACAGAGACCCaatcTGCAGAAGTATGTCCGGGAGCAGATCCTGCTGGCTGTAGCTGTCATAGTAAAGAGAGGTTCTCTGGACAAGTCGATCAACTGTAAAGGCATCTTCCACGAAGTCAGCCAACTCATCAGCAGCGGCAACCCCACAGTGCAGACGCTGGCCTGCTCCATCCTGACGGCCCTCATCAGTGAGTTCTCCAGCTCCAGTAAGACCAGTAACATCGGCCTCAACATGGAGTTCCATGGCAGCTGCAAACGCATTTTTCAGGAGGATGACCTTCATCAGATCTTCATGTTGACCATGGAGGTGCTGCAGGAGTTCAGTCGCAGAGAGAACCTCAACGCTCAGATGTCCTCAGTGTTCCAGAGATACCTGGCCCTGGCCAATCAGGTCCTCAGCTGGAACTTCTTGCCGCCCAATCTGGGGCGCCACTACATCGCCATGTTTGAGTCCACCCAGAACGTGATGCTGAAGCCCACAGAGACCTGGAGAGAAGCCCTGCTCGACACCTGTGTCATGGACCTCTTCTTCACCGTGCACAGAAAGATCCGTGAGGACTCAGACATGGCCCAGGACTCCCTGCAGTGCCTGGCCCAGCTGGCCTCCATGCACGGCCCCATCTTCCCTGATGAGAccgctcaggtctcctacctggcccACCTGGTGGAGGGGCTTCTCAGCATGATCAATGGGATAGAGATCGAGGACTCTGAGGCAGTAGGTATCTCTAACATCATCTCCAACCTGATCAGCACGTTCCCCCGTGTCATCCTGACTGCCCTGCCCAGCGAGCTCTTCACCTCCTTCATCAACTGTCTCACCCTCCTCACCTGCTCCTTCGGACGCAGCGCCGCCCTGGAGGAAGTGCTGGATAAGGATGACATGGTATACATGGAGGCGTATGACAAGCTTTTAGAGTCATGGCTGACCCTGGTTCAGGATGATGAACATTTCCCCCGCGGTTGCTTCGTCCAACCCGCCGTTCAGGTCTTCAACTCCTACATCCAGTGTCACCTGGCCGCCCCCGACGGCACCCGCAAtctgACAGCAAACGGTGTGGCATCTCATGAGGAGGATGAGATTAACGAGTTACAGGAGGACGACAGAGAGCTGTTCTCAGACCAGCTGGCCAGCATTGGCATGTTAGGACGCATCGCAGCCAACCACTGTATCCCCCTTCTGACCAGTCTGTTGGAGGAGCGGGTGACGCGGCTCCACGGCCAGCTCCAGAGGACCCAGCAGCACCTCATGAACTTGTCTAACCCCGGATCAGTGGACCGCAAGGTCCTGGATGACCTCTACGAAGACATCCACTGGCTCATACTGGTCTCAGGCTACGTCCTGACAGATGACCCTCAGGGTGAGACTCCTCTGATCCCAGCGGAGGTGATGGAGTATTCTATCAACCACTCTACTGAGGTGGACATCAACACCACCCTGCAGATACTGGGCTCCCCCGGGGAGAAGGCCTCCTCTATCccagggtgcaacaggacagacTCTGTCATCAGGTTGTTGTCAGCGGTGTTGAGGACATCAGAGGTGGAGTCCAGGGCTACGAGGGCCAGTCTGACAGAACTGCTCAGCCCTCAGATGGGGAAGGACATTGTGTGGTTTCTCAAACGCTGGGCCAAGACTTACCTACTGGTGGACGAGAAACTCTACGAACAGATCAGTATCCCCCTGAGCATGGCATTTGGGGCGGACACGGAGGGGGCCCAGTGGATTGTGGGATACCTCCTGGAGAAGGTGATCAACAACCTGTCTGTGTGGAGCTCTGAACCTGAACTGGCCAACGACACGGTGGAGCTACTGGTCTGTCTggtggagaagagggagagGGCCAACATTGTGGTACAGTGTGAGAACTGGTGGAACTTGGCAAAGCAGTTTGCCAGCCGCAGTCCTCCCCTAGACCTGCTGTCCAGCTCAGTACAGAGGTCCCTGATGAAGGCCCTGGTTCTGGGGGGCTTTGCACACATGGACTCAGACACCAAACAGCAGTACTGGACAGAGGTGCTGCACCCCCTCCAGCAGCGCTTCCTCAACCTGATCAACCAGGAGAACTTTCCTCAGATCTGTCAGGAGGAGAGTGTGAAGCGGGAGATCGTTGCCACCCTGGAGGCCCTGTGTGGCATCGCCGAGGCAACGCAGATCGACAACGTGGCGTCTCTCTTCAGCTTCCTCATGGACTTCCTGTCCAGCTGCATCGGCCTGATGGAGGTGTACCGCAACACACCAGAGACGGTCAACCTCATCATCGAGGTGTTTGTGGAGGTCGCCCACAAACAGATTTGCTACCTGGGAGAGTCGAAGTCTATGAAGCTGTACGAGGTGTGCCTGACTCTGCTGCAGGTCTACTCTAAGAACAACCTGGGCAGGAAGAGGGCTGATGTGGCTGCTGAGGAGGACCAGTACCAGGACCTGCTGCTCATCATGGAGCTGCTCACCAACCTGCTCTCTAAGGAGTTCATTGACTTCTCAGACACAGATGTTGGAATAGATGAGGTGTTCCGGGGGCAGGAGCAGGGTTCGGGAGCGACAGGTCGGTCGGTGTCGGCTGCAGACGTAGTTCTGTTTGGGGTCAACATCATTCTGCCACTCATGTCTCAGGACCTgctcaagTTCCCATCTCTGTGTAACCAGTACTACAAGCTCATCACGTTCATCTGTGAGATTTTTCCTGAGAAGATCCCCCAGCTACCAGAGGAGCTGTTCAAGAGTCTCATGTACTCCCTAGAGCTGGGCATGACATCCATGAGTTCAGAGGTCAGCCAGCTGTGTCTGGAGGCTCTGTCCCCCCTGGCTGAGCAGTGTGCCAAGACCCAGGAGAAAGACACGCCCCTCTTCATTGCTACACGCCACTTCCTCAAGtTGGTGTTTGACATGCTGGTACTGCAGAAACACAACACAGAGATCACAGTGGCAGCGGGAGAAGCTCTCTATACACTAGTGTGCCTGCATCAAGCGGAGTACAAGGAGCTGGTGGAGTCTCTGCTCGCCACCCAGCGAGATGCCGTCATCTACCAGCGACTGGCTGACGCCTTTAACAAGCTGACAGCCAGCAGCACGCCCCCGAGCATGGACCGCAAGCAGAAGGTGGACTTCCTCAAGAGCCTAGAGGAGTTTGTGTCCAACGTAGGTGGGCTGCTCTGTGTCAAATAACCACTAGCCCCCAAACTCCCCTCCTCCCTAGCACCTATTTCTATGTCCAACCCGCTCACAGACTATCTACCTTGACCACGCCAAACCATGAAACAGAGACTGACAGAGCTGAGGAGCTGCACTGTTAGACTGTGACATAAAGGGGGAAGGTTGAGACACTGAAGGGAGCAGGGGTGTGGACTGGACTATAGTGTCGTTTGGGCAGGTTTCCACGCCTGCTCCTCCCCCTTTTCATCAGAGGCCCCCAGcgcacacatacagtgggggagGGGGGATCAGAGAGGGATGGACTCGTCCCCTCAGCCAATCATTTTTTTGAGTTTGCCAGTGGGAGGGTTGGGATGAACACAACAGGAGTAGGTGCCAATCTGTTCTGAGAACGctatgcctctccctctctccctgcctctacaccctcgccctccccccctccccagaGTGCCTTTGTTTTCTTGTTTGTGTCGTGTGTCGACTCCTGTGTGTCCATGTGGCCAAGCTGAGACGTGTCTTACGTACAGCAACGACTGTGCCTGTCACATACCAAGAACACGgtggaagcacacacacacagatctccaTGACACCGAGAGGCTCGATCCCGCCACCTTCGGGCTGCTGAATCTGTTAAATGGGAGAGCtgatgataaaaaaaa
>XM_036974950.1
ATGATGGCGGCGGTCGGTTCACCAGAAGTGATTTCACAGCTGGAAAGCGCTGCCAAAGTTTTAATGgcaCCGCCGTCCATGGTCAATGCAGAGCAGAGGCAGCATGCAGAGCACATATTCCTCTCCTTCAGGAAGTCTAAATCACCCTTCGCTGTCTGCAAGCACATCTTAGAGACCAGTAAGGTAGACTATGTGCTGTTCCAGGCTGCCACAGCCGTCATGGAGGCGGTGGTACGGGAGTGGATCCTGCTGGAGAAGGCCAGCATCGAGTCGCTCCGAACATTCCTCCTCACCTACGTCTTACAGAGACCCaatcTGCAGAAGTATGTCCGGGAGCAGATCCTGCTGGCTGTAGCTGTCATAGTAAAGAGAGGTTCTCTGGACAAGTCGATCAACTGTAAAGGCATCTTCCACGAAGTCAGCCAACTCATCAGCAGCGGCAACCCCACAGTGCAGACGCTGGCCTGCTCCATCCTGACGGCCCTCATCAGTGAGTTCTCCAGCTCCAGTAAGACCAGTAACATCGGCCTCAACATGGAGTTCCATGGCAGCTGCAAACGCATTTTTCAGGAGGATGACCTTCATCAGATCTTCATGTTGACCATGGAGGTGCTGCAGGAGTTCAGTCGCAGAGAGAACCTCAACGCTCAGATGTCCTCAGTGTTCCAGAGATACCTGGCCCTGGCCAATCAGGTCCTCAGCTGGAACTTCTTGCCGCCCAATCTGGGGCGCCACTACATCGCCATGTTTGAGTCCACCCAGAACGTGATGCTGAAGCCCACAGAGACCTGGAGAGAAGCCCTGCTCGACACCTGTGTCATGGACCTCTTCTTCACCGTGCACAGAAAGATCCGTGAGGACTCAGACATGGCCCAGGACTCCCTGCAGTGCCTGGCCCAGCTGGCCTCCATGCACGGCCCCATCTTCCCTGATGAGAccgctcaggtctcctacctggcccACCTGGTGGAGGGGCTTCTCAGCATGATCAATGGGATAGAGATCGAGGACTCTGAGGCAGTAGGTATCTCTAACATCATCTCCAACCTGATCAGCACGTTCCCCCGTGTCATCCTGACTGCCCTGCCCAGCGAGCTCTTCACCTCCTTCATCAACTGTCTCACCCTCCTCACCTGCTCCTTCGGACGCAGCGCCGCCCTGGAGGAAGTGCTGGATAAGGATGACATGGTATACATGGAGGCGTATGACAAGCTTTTAGAGTCATGGCTGACCCTGGTTCAGGATGATGAACATTTCCCCCGCGGTTGCTTCGTCCAACCCGCCGTTCAGGTCTTCAACTCCTACATCCAGTGTCACCTGGCCGCCCCCGACGGCACCCGCAAtctgACAGCAAACGGTGTGGCATCTCATGAGGAGGATGAGATTAACGAGTTACAGGAGGACGACAGAGAGCTGTTCTCAGACCAGCTGGCCAGCATTGGCATGTTAGGACGCATCGCAGCCAACCACTGTATCCCCCTTCTGACCAGTCTGTTGGAGGAGCGGGTGACGCGGCTCCACGGCCAGCTCCAGAGGACCCAGCAGCACCTCATGAACTTGTCTAACCCCGGATCAGTGGACCGCAAGGTCCTGGATGACCTCTACGAAGACATCCACTGGCTCATACTGGTCTCAGGCTACGTCCTGACAGATGACCCTCAGGGTGAGACTCCTCTGATCCCAGCGGAGGTGATGGAGTATTCTATCAACCACTCTACTGAGGTGGACATCAACACCACCCTGCAGATACTGGGCTCCCCCGGGGAGAAGGCCTCCTCTATCccagggtgcaacaggacagacTCTGTCATCAGGTTGTTGTCAGCGGTGTTGAGGACATCAGAGGTGGAGTCCAGGGCTACGAGGGCCAGTCTGACAGAACTGCTCAGCCCTCAGATGGGGAAGGACATTGTGTGGTTTCTCAAACGCTGGGCCAAGACTTACCTACTGGTGGACGAGAAACTCTACGAACAGATCAGTATCCCCCTGAGCATGGCATTTGGGGCGGACACGGAGGGGGCCCAGTGGATTGTGGGATACCTCCTGGAGAAGGTGATCAACAACCTGTCTGTGTGGAGCTCTGAACCTGAACTGGCCAACGACACGGTGGAGCTACTGGTCTGTCTggtggagaagagggagagGGCCAACATTGTGGTACAGTGTGAGAACTGGTGGAACTTGGCAAAGCAGTTTGCCAGCCGCAGTCCTCCCCTAGACCTGCTGTCCAGCTCAGTACAGAGGTCCCTGATGAAGGCCCTGGTTCTGGGGGGCTTTGCACACATGGACTCAGACACCAAACAGCAGTACTGGACAGAGGTGCTGCACCCCCTCCAGCAGCGCTTCCTCAACCTGATCAACCAGGAGAACTTTCCTCAGATCTGTCAGGAGGAGAGTGTGAAGCGGGAGATCGTTGCCACCCTGGAGGCCCTGTGTGGCATCGCCGAGGCAACGCAGATCGACAACGTGGCGTCTCTCTTCAGCTTCCTCATGGACTTCCTGTCCAGCTGCATCGGCCTGATGGAGGTGTACCGCAACACACCAGAGACGGTCAACCTCATCATCGAGGTGTTTGTGGAGGTCGCCCACAAACAGATTTGCTACCTGGGAGAGTCGAAGTCTATGAAGCTGTACGAGGTGTGCCTGACTCTGCTGCAGGTCTACTCTAAGAACAACCTGGGCAGGAAGAGGGCTGATGTGGCTGCTGAGGAGGACCAGTACCAGGACCTGCTGCTCATCATGGAGCTGCTCACCAACCTGCTCTCTAAGGAGTTCATTGACTTCTCAGACACAGATGAGGTGTTCCGGGGGCAGGAGCAGGGTTCGGGAGCGACAGGTCGGTCGGTGTCGGCTGCAGACGTAGTTCTGTTTGGGGTCAACATCATTCTGCCACTCATGTCTCAGGACCTgctcaagTTCCCATCTCTGTGTAACCAGTACTACAAGCTCATCACGTTCATCTGTGAGATTTTTCCTGAGAAGATCCCCCAGCTACCAGAGGAGCTGTTCAAGAGTCTCATGTACTCCCTAGAGCTGGGCATGACATCCATGAGTTCAGAGGTCAGCCAGCTGTGTCTGGAGGCTCTGTCCCCCCTGGCTGAGCAGTGTGCCAAGACCCAGGAGAAAGACACGCCCCTCTTCATTGCTACACGCCACTTCCTCAAGtTGGTGTTTGACATGCTGGTACTGCAGAAACACAACACAGAGATCACAGTGGCAGCGGGAGAAGCTCTCTATACACTAGTGTGCCTGCATCAAGCGGAGTACAAGGAGCTGGTGGAGTCTCTGCTCGCCACCCAGCGAGATGCCGTCATCTACCAGCGACTGGCTGACGCCTTTAACAAGCTGACAGCCAGCAGCACGCCCCCGAGCATGGACCGCAAGCAGAAGGTGGACTTCCTCAAGAGCCTAGAGGAGTTTGTGTCCAACGTAGGTGGGCTGCTCTGTGTCAAATAA

Function

symbol description
xpo4 Predicted to enable nuclear export signal receptor activity. Predicted to be involved in protein export from nucleus. Predicted to act upstream of or within protein transport. Predicted to be located in nucleus. Predicted to be part of nuclear pore. Predicted to be active in cytoplasm. Is expressed in several structures, including adaxial cell; alar plate midbrain region; eye; midbrain; and musculature system. Orthologous to human XPO4 (exportin 4).

NR:

description
PREDICTED: exportin-4 isoform X2

GO: NA

KEGG:

id description
K25203 XPO4; exportin-4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036974949.1 False 4129 mRNA 0.56 22 65392849 65432153
XM_036974950.1 True 3456 mRNA 0.56 22 65393502 65432145

Neighbor

gene id symbol gene type direction distance location
eef1akmt1 eef1akmt1 coding downstream 2518 65387523 ~ 65390331 (-)
cryl1 NA coding downstream 30248 65330832 ~ 65362601 (-)
gjb8 cxb6 coding downstream 62320 65326162 ~ 65330529 (-)
LOC110520402 gja3 coding downstream 66835 65320894 ~ 65326014 (-)
LOC110520397 sctr coding downstream 210195 65173958 ~ 65182654 (-)
LOC110520406 LOC106586596 coding upstream 5410 65437563 ~ 65459000 (-)
ska3 ska3 coding upstream 40132 65472285 ~ 65476510 (-)
hcn5 LOC106586566 coding upstream 47987 65480140 ~ 65484785 (-)
LOC118944602 NA coding upstream 53731 65485884 ~ 65486801 (-)
pla1a pla1a coding upstream 71832 65503985 ~ 65508384 (-)
G287005 NA non-coding downstream 52954 65338173 ~ 65339895 (-)
G286979 NA non-coding downstream 88351 65290732 ~ 65304498 (-)
G286986 NA non-coding downstream 91925 65300694 ~ 65300924 (-)
G286961 NA non-coding downstream 140061 65251989 ~ 65252788 (-)
G286960 NA non-coding downstream 141000 65251643 ~ 65251849 (-)
G287041 NA non-coding upstream 13926 65446079 ~ 65446302 (-)
G287043 NA non-coding upstream 15915 65448068 ~ 65448417 (-)
G287067 NA non-coding upstream 94795 65526948 ~ 65532451 (-)
G287081 NA non-coding upstream 122377 65554530 ~ 65554731 (-)
G287083 NA non-coding upstream 124274 65556427 ~ 65556658 (-)
G286985 LOC106586592 other downstream 92432 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 156941 65235180 ~ 65235908 (-)
G286638 NA other downstream 316864 65054700 ~ 65075985 (-)
G286580 marco other downstream 363113 65014259 ~ 65029736 (-)
G286522 NA other downstream 422094 64969549 ~ 64970755 (-)
G287042 NA other upstream 14672 65446825 ~ 65447283 (-)
G287112 NA other upstream 147638 65579791 ~ 65580495 (-)
G288578 NA other upstream 1410518 66842671 ~ 66842881 (-)
G289678 NA other upstream 2194679 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 2451599 67883752 ~ 67886232 (-)

Expression


Co-expression Network