trnaa-ugc-4



Basic Information


Item Value
gene id trnaa-ugc-4
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65543034 ~ 65543108 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaa-ugc-4
GGTCCCGTGttgctcagttagtagagcatggtgcttgcaacgccaggggtgtgggttcaattcccacagggaCCA

Function


NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-4 True 75 mRNA 0.58 1 65543034 65543108

Neighbor


gene id symbol gene type direction distance location
LOC110520412 LOC106586598 coding downstream 7754 65520214 ~ 65535280 (-)
hsd3b1 LOC106586600 coding downstream 30689 65510598 ~ 65512345 (-)
pla1a pla1a coding downstream 34650 65503985 ~ 65508384 (-)
LOC118944602 NA coding downstream 56233 65485884 ~ 65486801 (-)
hcn5 LOC106586566 coding downstream 58249 65480140 ~ 65484785 (-)
LOC110504464 NA coding upstream 153470 65696578 ~ 65697411 (-)
LOC110505400 NA coding upstream 166496 65709604 ~ 65710566 (-)
LOC110504474 wdr3 coding upstream 226206 65769314 ~ 65777312 (-)
LOC110520418 fam46c coding upstream 278347 65821455 ~ 65840478 (-)
LOC110520419 man1a2 coding upstream 310613 65853721 ~ 65963713 (-)
G287067 NA non-coding downstream 10583 65526948 ~ 65532451 (-)
G287043 NA non-coding downstream 94617 65448068 ~ 65448417 (-)
G287041 NA non-coding downstream 96732 65446079 ~ 65446302 (-)
G287005 NA non-coding downstream 203139 65338173 ~ 65339895 (-)
G286986 NA non-coding downstream 242110 65300694 ~ 65300924 (-)
G287081 NA non-coding upstream 11422 65554530 ~ 65554731 (-)
G287083 NA non-coding upstream 13319 65556427 ~ 65556658 (-)
G287097 NA non-coding upstream 24912 65568020 ~ 65568248 (-)
G287110 NA non-coding upstream 36164 65579272 ~ 65579563 (-)
G287206 NA non-coding upstream 115545 65658653 ~ 65658911 (-)
G287042 NA other downstream 95751 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 242617 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 307126 65235180 ~ 65235908 (-)
G286638 NA other downstream 467049 65054700 ~ 65075985 (-)
G286580 marco other downstream 513298 65014259 ~ 65029736 (-)
G287112 NA other upstream 36683 65579791 ~ 65580495 (-)
G288578 NA other upstream 1299563 66842671 ~ 66842881 (-)
G289678 NA other upstream 2083724 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 2340644 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 2663482 68206330 ~ 68208674 (-)

Expression



Co-expression Network