XLOC_021715 (si:dkey-78k11.9)


Basic Information

Item Value
gene id XLOC_021715
gene name si:dkey-78k11.9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 26009266 ~ 26010376 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043101
AACAGCTATAACTCCATCAAGAACATCGGATGATCATCTTTTACCAATAATGGAGTCCAACTCTACCTGTAAATTGGTCAATTTTGACTTTACGTTTAGATTTTTGCCCTCAGTCTACGTGAGTGTTTTCACTCTTGGAGTTATGGGAAACTGTTTGGGACTAAAATCTATATATAAGAACTGGACGAAAATGGGCAACGTGAATATCTTCATGCTTAACCTTTGCGGGGCAGACATTTTATATCTTCTCACTTTGCCTTTTTTTGTGGTTTACTACGCATCCGAGCACAAATGGATATTTGGACATGCTTTCTGCAAGATTTTAAGATTGTGTTTCTGCATCAACCTGTATGGCAGCATCGGTTTCCTCACCTGCATCAGCGTTTATAGGTACCTGGGCATCGTCCACACTTTAAGAGTTAAAGGCAGAATTACAGCGAGGTTCTCCGTCTTGGTTGCTTTGCTAGTATGGCTTCTGGTGTTGCTTCAGTCTCTGCCTGATTTGTTTTTTGTCAAAACCTCCGACAACGCAACGTCATGCTATGACACGACTTCGGACAAGTACATGAGGGAATACCTCAAGTACAGCATCGGGAGGACGGTCGTTGGATTCGGGATCCCGTTGTTAATCATGCTCTGCTGCTACGGACATGTGGCGTTCACTCTGTTGACAAAGAAAGACATCGATATCATCTTGAAGCTGAGGTGTCTGAGGCTGGTTGTCATCCTGATTTTGCTCTTCTCCATTTGTTTCACTCCTTTtcatatatttagaaatatgaaCCTGGCAACTCGAATTTCCAAGCTCGACGGCACGTGTCTGAAATGGTACGCAGATGTATATATTGCAAACCAGGTTGGAAATGGACTGGCGTGCATGAATAGTGCCATCAACCCGCTTCTCTATCTGTTTAACAGTGATGAGTTTTTGATGAAGTTTTTTGTAAAGTGCAGACGATCCAGACAATCTGTCGTTTCTCCTCAAGTGTCTCCTTCACTAAAGCATGAACTTGCCATCAGTTAGAGATGAATGAAGACTCTTTGTGTGATAACATATTTCTTCTTTTCCACTGGATTATGAACAGTGAATTAAATGATTCTTTTATCATCC

Function

symbol description
si:dkey-78k11.9 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060503-929 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000037155

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043101 True 1111 mRNA 0.42 1 26009266 26010376

Neighbor

gene id symbol gene type direction distance location
XLOC_021713 ccn5 coding upstream 5408 25993686 ~ 26003858 (+)
XLOC_021714 AL845287.1 coding upstream 14125 25995027 ~ 25995141 (+)
XLOC_021712 pkig coding upstream 66407 25879320 ~ 25942859 (+)
XLOC_021711 ttpal coding upstream 134389 25868637 ~ 25874877 (+)
XLOC_021710 hnf4a coding upstream 143410 25832689 ~ 25865856 (+)
XLOC_021716 pfkfb1 coding downstream 6851 26017227 ~ 26037969 (+)
XLOC_021717 itih6 coding downstream 29148 26039524 ~ 26056072 (+)
XLOC_021718 atp6ap1b coding downstream 69091 26079467 ~ 26094178 (+)
XLOC_021719 si:dkey-78k11.4 coding downstream 91652 26102028 ~ 26102795 (+)
XLOC_021720 ptpn22 coding downstream 132237 26142613 ~ 26180539 (+)
XLOC_021691 BX957326.2 non-coding upstream 1448393 24556455 ~ 24560873 (+)
XLOC_021689 NA non-coding upstream 1517229 24483312 ~ 24492037 (+)
XLOC_021687 CR925709.3 non-coding upstream 1860495 24148055 ~ 24148771 (+)
XLOC_021686 NA non-coding upstream 1868856 24133781 ~ 24140410 (+)
XLOC_021722 NA non-coding downstream 580748 26591124 ~ 26625133 (+)
XLOC_021724 CT573349.1 non-coding downstream 918367 26928743 ~ 26928858 (+)
XLOC_021731 NA non-coding downstream 1498491 27508867 ~ 27516273 (+)
XLOC_021738 NA non-coding downstream 1860363 27870739 ~ 27872705 (+)
XLOC_021742 NA non-coding downstream 2129383 28139759 ~ 28277430 (+)

Expression


Co-expression Network