Item | Value |
---|---|
gene id | LOC110520418 |
gene name | fam46c |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 65821455 ~ 65840478 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036974962.1 | False | 4721 | mRNA | 0.46 | 2 | 65821455 | 65827125 |
XM_021597728.2 | False | 4663 | mRNA | 0.47 | 2 | 65821455 | 65827337 |
XM_036974964.1 | False | 4687 | mRNA | 0.47 | 2 | 65821455 | 65840478 |
TU326049 | True | 1105 | lncRNA | 0.41 | 2 | 65821455 | 65822590 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110504474 | wdr3 | coding | downstream | 44143 | 65769314 ~ 65777312 (-) |
LOC110505400 | NA | coding | downstream | 110889 | 65709604 ~ 65710566 (-) |
LOC110504464 | NA | coding | downstream | 124044 | 65696578 ~ 65697411 (-) |
LOC110520413 | LOC106586602 | coding | downstream | 272040 | 65535814 ~ 65549415 (-) |
trnaa-ugc-4 | NA | coding | downstream | 278347 | 65543034 ~ 65543108 (-) |
LOC110520419 | man1a2 | coding | upstream | 13243 | 65853721 ~ 65963713 (-) |
LOC110520420 | trim45 | coding | upstream | 133002 | 65973480 ~ 65978709 (-) |
LOC110520422 | vtcn1 | coding | upstream | 138347 | 65978825 ~ 65984444 (-) |
ttf2 | ttf2 | coding | upstream | 179555 | 66020033 ~ 66027601 (-) |
rnf17 | rnf17 | coding | upstream | 195864 | 66036342 ~ 66070134 (-) |
G287556 | gdap2 | non-coding | downstream | 37794 | 65782911 ~ 65783661 (-) |
G287552 | NA | non-coding | downstream | 44663 | 65776565 ~ 65776792 (-) |
G287331 | NA | non-coding | downstream | 53250 | 65767995 ~ 65768205 (-) |
G287311 | NA | non-coding | downstream | 63638 | 65757593 ~ 65757817 (-) |
G287664 | NA | non-coding | upstream | 153295 | 65993773 ~ 65997590 (-) |
G287666 | NA | non-coding | upstream | 157490 | 65997968 ~ 66000189 (-) |
G287693 | NA | non-coding | upstream | 228659 | 66069137 ~ 66069360 (-) |
G287697 | NA | non-coding | upstream | 234705 | 66075183 ~ 66075418 (-) |
G287112 | NA | other | downstream | 240960 | 65579791 ~ 65580495 (-) |
G287042 | NA | other | downstream | 374172 | 65446825 ~ 65447283 (-) |
G286985 | LOC106586592 | other | downstream | 521038 | 65298207 ~ 65300417 (-) |
G286953 | LOC107579696 | other | downstream | 585547 | 65235180 ~ 65235908 (-) |
G286638 | NA | other | downstream | 745470 | 65054700 ~ 65075985 (-) |
G288578 | NA | other | upstream | 1002193 | 66842671 ~ 66842881 (-) |
G289678 | NA | other | upstream | 1786354 | 67626832 ~ 67633493 (-) |
G289653 | LOC106607871 | other | upstream | 2043274 | 67883752 ~ 67886232 (-) |
si:ch211-214p13.7 | NA | other | upstream | 2366112 | 68206330 ~ 68208674 (-) |
G290542 | NA | other | upstream | 2738625 | 68579103 ~ 68580707 (-) |