LOC118964314


Basic Information

Item Value
gene id LOC118964314
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66400067 ~ 66412373 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051358.1
ATATCAGATTTAAAGCCTTGTATGATACTTATATTAGCGTATAACTTTTTTTATAATATCATATGTATAGCTTTATAACAATTTAAACGTATATGAACCATTTTGGATGTAGCCCATCAAAATCACTCAACGTCTTCCACGCGAGCGACATGAATCGAGCGCACCCAGTCTTCTGGCGAGATGTTTAGACTTTCGTGTAGTGATAGATGCGTATTCGAGAAACTGTTGACCAATAACTCTGATAGATAAGTATTCGGCAAACTATTGCCCATTACCTATGTGTAGGTAAGCATCATCTGTTATAATTTGTATAACTAAatcatgtatgcatgtatgtattatgTAACGTTAGTTAACGTCAGCAGCTGCGTAGTTCAACCTTGGTTCACGTGCTACTCTATACTAGGAAACTCGGAAATGTTCAACTTGCTAAATGGTTGAACGCGTACCGCGTAACTACAGTCACTGTGtaactacagtcgtggccaaaagttttgagaatgacacaaacttttggccacgactgtacaacctTTAACAAGTCGAACATTTCCCAGTTTCCTTGTTCTGACTATCACTTGAACGCGGCAATAATACCACAATGACACAAGACTGTCCCAGCCAACACATGAAACTACTAACGCTCCATTCCCAGAGAAGAGATGGCGAAAGTTGAAGAGGATCAGAACTGGCTTTCAGCAGACTGACATTTCAATGGATGGCTGCACTTTCTCAAACGGGAATGGTGGTAATATGGCTGTTATCAACAGAGAGAGTTAATCAGATGTTGATATGGTGGCATGCATCTTTGCCCTACATGTGGAAAACAGTGACTTCACCATGCATTTTACTGATAAGTAGGGGGATGTGTTCAAGTACAGGCTTCTCACTCTGAGCAGGTCAAATAGATAAGAGCCACATATGGAGTTTAAACTACCATACCGGATTAAAGGAAATGTTACTGTCTTGAAGGGCCCCAGTGTAATATGGAGCCATGAAGGTGTTGTCTTTTACATTTCTCTACAAGCAGGTGAAGTTAGACAAATGCCTATCAAGCTCGCTCTGAACTTTATTGGTGAGGATCCCCTCAACAAAAGGAAAATATTCATACTAGATTCCCAAACACTATCCAAAGAATGCCTGAATGATCAATTGGACTCTCCAGGGAGGAGCAAAACCCTGGGGTATTTTGTAGAGGAAGGACAAGTATTTAACGGTGCTCTGATCTTACCTCGTGCCTACAGTTCCATCACACCGTGTAGATTTGTGATCTCAGCTGAAGAGGTGAACAGTGTGTCAAAATCAACTGGTGGCAGCGACCAGTAAAAAGCAGTTGCTGTATTTGAAAGGTATGCCAGGTTTTCTTTTGAAGAACCTCACCACATTCAGATGGTCAACACTGGACGGAATGGAAGTCTGTTTGCCATCTCTTTCAACCACGTGCAGTATGGAAAGACACTTTTCAGGTAGCATCATGCTGGTTAGGTGTGAGCTCCCTCCGTGAGGATGACGTTGTGAACTGTGGAACAGATCAGATACTGCTGGTCTTTGGAAGCCAGAGCCCTACTGTGGGTCCAGTGGATCAATACCTCATCACAGATCTCTGCGGGACAACCTATTCTGAGAGACGCTGTACTTTTTTGCTCTTCTTTACCAGTCTTATAACACCCTACTTATAACCCAGTTCTGATGTGTGAAGATTGTTGTATGTTTCAGCATGGACATGAGAGCGGAGAAGGACGGACCATATCTGACACAGCTCAAGAGAACTACCTCCTAACTGTCAAAACTCTACAGGACAGACTACAGCGGAGAGTGTGACTTTATCCATCCTGACAGAGGCAGGCCAGTGCCAGGCGCTTGCGGTCATTCAGACCCACAGCCAAGtgtccccccccacacacaaagaTCCCATCTCACTGCTCTCACCCAGTGCCTACGGCCAAGATAAGCAGGCGAGATGGTGCCAGTGGAGCctgtgacacagacacacacagactggcaGTGACCGCTGTGACTGACCTGACCCCACTGCTGACCTCTGGCAGTGTCAAATGTGCTGTCATGCTCCATTACGTCCACAGACAGGGATCTTCTGGCTCCCCGACCGCCCTAGTTGAAGTCGCCCAGTACGAAGATTGTCTCTGCTCCTTggcgaggaggagggggagactgagaagaagaggaggaagtgcaGCGGAATGAGAAAGATGGAGCCCCCTGATCCAGGCTCTGCATAGCGACTCAAGAGGTGCAGGGAGGTGTGGCCgtgggacagggagaggagtaggaggaggttTAGCCCCCTGGTGGACGTGGAACGCTGTCGTAGGCTGACCCTGATACTGGCCCAGGTTCAGTTGGAGGGAGATATAGCCACCCTCATAGAGTCACAGTCACTCATTCAGCTCTGCACTGCATTGACATGTATAGTACTTCCTTTTATTTATATGCTTTCATGAGTACCAATGGATTGTACGGTTACgttaatttgctttctaatattCTGTAAGTGCCCATTATTCAATGAAATATTGAGTTTCAGTCCAGGTGATGTCGCTCTTATCTCATTTTGAACTGAGTGCTACCCAATGCATTGGTAAGGAGAAGTTTCAAACCAGAGATCGATATGGTTCACCATGTATGCTACTGTAGTTGGTAGGTTTACATATCTGTTACTGTAAACCTGTCTACCAATAGTGTGGGTGAATGCGTGTCTCCTTTGGACAACGTCCTGCTCTTCACACCTCATCTCTGTGTGATCGctactcctctctcccactcttctccCCTCAGACCGGCAGCCTGTGAAACACTCTTTAATGTGTGCTGCTGTGCATTGCACGCTGGGAAAGGCCGGCTTCATACTCTGTTCTGAAGTGGGAAATGCTGTGTGTGTTCAGAATGAAATGTTAGGAGGTAACTGGATGGCATAAAGGAGGTAACTGGAAGGTCTAAATCTCCTTCCCTGGTTGGTAGCTGGATTTGGCTGCAAAACCTTTTAGTAGCAATTCTGCCCTTCATGGTTCAGTTCTGTTCTCTGTAACATGCTATAAAATTAACCCATTTTGGATGATGGTTCATGATGACCACATGTAGTACAGTTACTATTGTGTCCTTTCTCCAAGGGAATCAACTGCAGCCCTCTCATGAGTCATCATCCCAAGCTGTTAGATCAGTTATTTCTGACTAAAGGTGTCTGTTATTTACAGAATACTTAAATAAAAACG

Function

NR:

description
PREDICTED: Fanconi anemia group B protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051358.1 True 3230 mRNA 0.45 3 66400067 66412373

Neighbor

gene id symbol gene type direction distance location
LOC110520429 LOC106586615 coding downstream 104180 66268185 ~ 66295887 (-)
LOC110520425 LOC106582038 coding downstream 206580 66183116 ~ 66193487 (-)
rnf17 rnf17 coding downstream 329933 66036342 ~ 66070134 (-)
ttf2 ttf2 coding downstream 372466 66020033 ~ 66027601 (-)
LOC110520422 vtcn1 coding downstream 415942 65978825 ~ 65984444 (-)
LOC118944607 LOC106582097 coding upstream 59966 66472339 ~ 66475059 (-)
LOC110520431 LOC106586619 coding upstream 78095 66490468 ~ 66537895 (-)
LOC110504514 NA coding upstream 319864 66732237 ~ 66747293 (-)
rpe rpe coding upstream 608081 67020454 ~ 67023408 (-)
LOC110520437 LOC106586625 coding upstream 653984 67066357 ~ 67078648 (-)
G288116 NA non-coding downstream 64151 66335701 ~ 66335916 (-)
G287993 NA non-coding downstream 77471 66322367 ~ 66322596 (-)
G287992 NA non-coding downstream 77875 66321993 ~ 66322192 (-)
G287976 NA non-coding downstream 90757 66309078 ~ 66309310 (-)
G287970 NA non-coding downstream 99094 66300733 ~ 66300973 (-)
G288172 mospd2 non-coding upstream 6445 66418818 ~ 66420930 (-)
G288230 NA non-coding upstream 115312 66527685 ~ 66532169 (-)
G288284 NA non-coding upstream 132294 66544667 ~ 66544890 (-)
G288286 NA non-coding upstream 137328 66549701 ~ 66550419 (-)
G288287 NA non-coding upstream 142813 66555186 ~ 66555423 (-)
G287112 NA other downstream 819572 65579791 ~ 65580495 (-)
G287042 NA other downstream 952784 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1099650 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1164159 65235180 ~ 65235908 (-)
G286638 NA other downstream 1324082 65054700 ~ 65075985 (-)
G288578 NA other upstream 430298 66842671 ~ 66842881 (-)
G289678 NA other upstream 1214459 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 1471379 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1794217 68206330 ~ 68208674 (-)
G290542 NA other upstream 2166730 68579103 ~ 68580707 (-)

Expression


Co-expression Network