Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964315 |
| gene name | LOC106605670 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 66554554 ~ 66555551 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110537513 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051359.1 | True | 863 | mRNA | 0.39 | 2 | 66554554 | 66555551 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520432 | LOC106586618 | coding | upstream | 65135 | 66477037 ~ 66489419 (+) |
| LOC110520430 | mspd2 | coding | upstream | 119928 | 66412453 ~ 66434626 (+) |
| LOC110504505 | LOC106586617 | coding | upstream | 167214 | 66370057 ~ 66387340 (+) |
| LOC110520426 | LOC106582091 | coding | upstream | 285739 | 66209113 ~ 66268815 (+) |
| LOC110520428 | NA | coding | upstream | 322364 | 66228399 ~ 66232190 (+) |
| LOC110520433 | LOC106586620 | coding | downstream | 7237 | 66562788 ~ 66630141 (+) |
| LOC110505407 | LOC106586622 | coding | downstream | 227858 | 66783373 ~ 66787442 (+) |
| LOC110520434 | LOC106586623 | coding | downstream | 245044 | 66800595 ~ 66809696 (+) |
| LOC110520435 | LOC106586624 | coding | downstream | 308567 | 66864118 ~ 66997509 (+) |
| LOC118944634 | NA | coding | downstream | 499325 | 67054876 ~ 67058489 (+) |
| G288076 | NA | non-coding | upstream | 65696 | 66488255 ~ 66488858 (+) |
| G288042 | NA | non-coding | upstream | 156427 | 66397892 ~ 66398127 (+) |
| G288023 | NA | non-coding | upstream | 187048 | 66367287 ~ 66367506 (+) |
| G288019 | NA | non-coding | upstream | 194881 | 66359395 ~ 66359673 (+) |
| G288014 | NA | non-coding | upstream | 204129 | 66349557 ~ 66350425 (+) |
| G288254 | NA | non-coding | downstream | 866 | 66556417 ~ 66556859 (+) |
| G288341 | NA | non-coding | downstream | 77807 | 66633358 ~ 66633567 (+) |
| G288372 | NA | non-coding | downstream | 102805 | 66658356 ~ 66663722 (+) |
| G288385 | NA | non-coding | downstream | 114439 | 66669990 ~ 66670440 (+) |
| G288403 | NA | non-coding | downstream | 124892 | 66680443 ~ 66680739 (+) |
| G288252 | NA | other | upstream | 4067 | 66549822 ~ 66550487 (+) |
| LOC118964312 | LOC106586611 | other | upstream | 518352 | 66027633 ~ 66036299 (+) |
| zmym2 | LOC106586592 | other | upstream | 1268998 | 65260200 ~ 65311166 (+) |
| LOC110520396 | LOC100136409 | other | upstream | 1387974 | 65161342 ~ 65166580 (+) |
| G286679 | NA | other | upstream | 1444917 | 65109256 ~ 65109637 (+) |
| G288430 | NA | other | downstream | 175735 | 66731286 ~ 66733797 (+) |
| G288674 | NA | other | downstream | 437620 | 66993171 ~ 66994131 (+) |
| LOC110520448 | LOC106586634 | other | downstream | 842406 | 67397151 ~ 67409646 (+) |
| G289116 | NA | other | downstream | 919422 | 67474973 ~ 67478929 (+) |
