LOC110520437 (LOC106586625)


Basic Information

Item Value
gene id LOC110520437
gene name LOC106586625
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67066357 ~ 67078648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597757.2
TGGGAGGAGACCGGACACTCACCCACTCAGTCAAGCCAGATATCGGAGAGCTCACAAccaccatctctccccatctcggaCAAAGCATAACATAACTGGACATCACTTCGCACTAGAGACACTGTGCCATTTCTTCGAAGAGGCAACAAGTAAGGGATGTTTTTCTCAATTACAAATCCCAGATCAGTGAGGTGTGCGTGATCGTTCCCAGCAAACGGCAGAAGGATGAACAGCTTCGATCTGGATGAGCTGTTCGACACGTGGGAGGACCTGAACCTCACAGGCCTCCTGGAGAACGGGACGCGCGTGGAGATGGGTGGCTGTCCCACAGCCTTCGACCGCAGCGCCCTGCTCCACTCCATGTGCATCCTCTACGTCTTCATCTTCGTGGTCGGTTTGGCCGCCAACAGCCTCGTCCTCTGGATCAACATCCGCGCCCAGCGCACCACCTCCCCTCGCCACGAGACCCACCTTTACATCGCCCACCTGGCGGCGGCTGACCTGTGCGTGTGCATCACGTTGCCCGTGTGGGTGAGCTCCCTGGCACAGCACAGCCACTGGCCCTTCAGCGAGTTGGCGTGTAAGCTCACCCACCTGCTCTTCTCCGTTAACCTCTTCAGCTCCATCTTCTTCCTGGCCTGCATGAGCGTCGACCGCTACCTGAGCATGACACGGCCGGCCGACAGTGAGGATGGGGGTCGGCGCCGGAAGCTGATTCGCCACGGCGTATGTATGGGGGTGTGGCTCCTGGCTCTGGTGGCTTCCCTGCCGGACACATACTTCCTGCGGGCTCTGAGGTCATCACAAGGGGAGGTAGTGCTGTGCAGGCCGGTGTACCCAGAGGAACACCCTAGGGAGTGGATGGTAGGAGTCCAGCTGAGCTTCATCCTGCTTGGCTTCATCATCCCCTTCCCTGTCATCGCTCTGGCCTATGCCCTCCTGGCCAAagcactctcctcctcctcctcctcttcctcctcggcaGTGGAGCAGGAGCGTCGTGTGAGCCGCAGGATGATCCTGGCCTACATAGTGGTGTTCCTCGGCTGCTGGGGGCCCTACCACGGGGTGCTCCTGGCCGATGCCCTCTCCCTGCTGGGCCTGGTTCCTCTGAGCTGTGGGCTGGAGAACGCCCTCTACGTGGCGCTGCACCTCACCCAGTGTCTGTCCCTGCTCCACTGCTGCGTCAACCCCATCCTCTACAACTTCCTCAACAGGAACTACCGCTACGACCTGATGAAGGCCTTCATCTTTAAGTACTCCACACGTACAGGCCTGGCCAGGCTCATAGAACAGACCCATGTCTCTGAGACAGAGTACTCTGCCGTCGCTGTGGAGAACACACCACAGATCTGAGACTAAACTCTAGAACACACTCTGGAACTCAAAAACACATCAAGGACATTTAGAACATAGTCTAGATCTGTGGTCACCAACTGGTCCATCTCCAAGGCTTTCctagtcgatcgccaaacatttctgtaaaaagcCCAACGAGAAAGCCTTGCGTTCTTAATTGTTTCGCTCTGTTTGCGGTAGGTGCACTTCATTCAGCTGCCCTGCTTGCCAGGTAGTCGAAGTGTTCCCATTTTTAATAATTTAAG
>XM_021597758.2
TGGGAGGAGACCGGACACTCACCCACTCAGTCAAGCCAGATATCGGAGAGCTCACAAccaccatctctccccatctcggaCAAAGCATAACATAACTGGACATCACTTCGCACTAGAGACACTGTGCCATTTCTTCGAAGAGGCAACAAATCCCAGATCAGTGAGGTGTGCGTGATCGTTCCCAGCAAACGGCAGAAGGATGAACAGCTTCGATCTGGATGAGCTGTTCGACACGTGGGAGGACCTGAACCTCACAGGCCTCCTGGAGAACGGGACGCGCGTGGAGATGGGTGGCTGTCCCACAGCCTTCGACCGCAGCGCCCTGCTCCACTCCATGTGCATCCTCTACGTCTTCATCTTCGTGGTCGGTTTGGCCGCCAACAGCCTCGTCCTCTGGATCAACATCCGCGCCCAGCGCACCACCTCCCCTCGCCACGAGACCCACCTTTACATCGCCCACCTGGCGGCGGCTGACCTGTGCGTGTGCATCACGTTGCCCGTGTGGGTGAGCTCCCTGGCACAGCACAGCCACTGGCCCTTCAGCGAGTTGGCGTGTAAGCTCACCCACCTGCTCTTCTCCGTTAACCTCTTCAGCTCCATCTTCTTCCTGGCCTGCATGAGCGTCGACCGCTACCTGAGCATGACACGGCCGGCCGACAGTGAGGATGGGGGTCGGCGCCGGAAGCTGATTCGCCACGGCGTATGTATGGGGGTGTGGCTCCTGGCTCTGGTGGCTTCCCTGCCGGACACATACTTCCTGCGGGCTCTGAGGTCATCACAAGGGGAGGTAGTGCTGTGCAGGCCGGTGTACCCAGAGGAACACCCTAGGGAGTGGATGGTAGGAGTCCAGCTGAGCTTCATCCTGCTTGGCTTCATCATCCCCTTCCCTGTCATCGCTCTGGCCTATGCCCTCCTGGCCAAagcactctcctcctcctcctcctcttcctcctcggcaGTGGAGCAGGAGCGTCGTGTGAGCCGCAGGATGATCCTGGCCTACATAGTGGTGTTCCTCGGCTGCTGGGGGCCCTACCACGGGGTGCTCCTGGCCGATGCCCTCTCCCTGCTGGGCCTGGTTCCTCTGAGCTGTGGGCTGGAGAACGCCCTCTACGTGGCGCTGCACCTCACCCAGTGTCTGTCCCTGCTCCACTGCTGCGTCAACCCCATCCTCTACAACTTCCTCAACAGGAACTACCGCTACGACCTGATGAAGGCCTTCATCTTTAAGTACTCCACACGTACAGGCCTGGCCAGGCTCATAGAACAGACCCATGTCTCTGAGACAGAGTACTCTGCCGTCGCTGTGGAGAACACACCACAGATCTGAGACTAAACTCTAGAACACACTCTGGAACTCAAAAACACATCAAGGACATTTAGAACATAGTCTAGATCTGTGGTCACCAACTGGTCCATCTCCAAGGCTTTCctagtcgatcgccaaacatttctgtaaaaagcCCAACGAGAAAGCCTTGCGTTCTTAATTGTTTCGCTCTGTTTGCGGTAGGTGCACTTCATTCAGCTGCCCTGCTTGCCAGGTAGTCGAAGTGTTCCCATTTTTAATAATTTAAG

Function

NR:

description
atypical chemokine receptor 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597757.2 False 1604 mRNA 0.57 2 67066357 67078648
XM_021597758.2 True 1578 mRNA 0.57 2 67066357 67078648

Neighbor

gene id symbol gene type direction distance location
rpe rpe coding downstream 42949 67020454 ~ 67023408 (-)
LOC110504514 NA coding downstream 319064 66732237 ~ 66747293 (-)
LOC110520431 LOC106586619 coding downstream 528462 66490468 ~ 66537895 (-)
LOC118944607 LOC106582097 coding downstream 591298 66472339 ~ 66475059 (-)
LOC118964314 NA coding downstream 653984 66400067 ~ 66412373 (-)
LOC110520442 LOC106586628 coding upstream 146213 67224861 ~ 67236245 (-)
LOC110520443 LOC106586629 coding upstream 197081 67275729 ~ 67286960 (-)
LOC110520451 LOC106586637 coding upstream 445953 67524601 ~ 67542329 (-)
LOC110520452 LOC106586638 coding upstream 466949 67545597 ~ 67568698 (-)
LOC110520453 LOC106586647 coding upstream 538842 67617490 ~ 67636658 (-)
G288828 NA non-coding downstream 58818 67007267 ~ 67007539 (-)
G288824 NA non-coding downstream 72226 66993001 ~ 66994131 (-)
G288781 NA non-coding downstream 139008 66927068 ~ 66927349 (-)
G288780 NA non-coding downstream 139855 66926276 ~ 66926502 (-)
G288777 NA non-coding downstream 143918 66921697 ~ 66922439 (-)
G289187 NA non-coding upstream 118718 67197366 ~ 67197865 (-)
G289197 NA non-coding upstream 127123 67205771 ~ 67205978 (-)
G289199 NA non-coding upstream 129485 67208133 ~ 67208438 (-)
G289205 NA non-coding upstream 133330 67211978 ~ 67212188 (-)
G289231 NA non-coding upstream 183815 67262463 ~ 67262828 (-)
G288578 NA other downstream 223476 66842671 ~ 66842881 (-)
G287112 NA other downstream 1485862 65579791 ~ 65580495 (-)
G287042 NA other downstream 1619074 65446825 ~ 65447283 (-)
G286985 LOC106586592 other downstream 1765940 65298207 ~ 65300417 (-)
G286953 LOC107579696 other downstream 1830449 65235180 ~ 65235908 (-)
G289678 NA other upstream 548184 67626832 ~ 67633493 (-)
G289653 LOC106607871 other upstream 805104 67883752 ~ 67886232 (-)
si:ch211-214p13.7 NA other upstream 1127942 68206330 ~ 68208674 (-)
G290542 NA other upstream 1500455 68579103 ~ 68580707 (-)
G290567 NA other upstream 1547684 68626332 ~ 68647620 (-)

Expression


Co-expression Network