LOC110520461 (LOC100136473)


Basic Information

Item Value
gene id LOC110520461
gene name LOC100136473
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 67944878 ~ 67980956 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975016.1
TTTATTTTCAGTGGCCACGTCATAGCGGGGGGAGACTGTAGACCACGAATTCCTCAGCGCTCCTGAAATCACAGACCTCTCTCTCGCCTCTGTTACCGGCACACATTCATCGAACTCCTCCTCGCAGCAGCTGTTTGAACGAAGCCGCTTTCCAGAAGGATGTTGCGAAGTGTCCCCTTCCTTGTACTGCTGGCCGTAGCGCTCTGTCAAACCGAGGAGGTGCAGACTAAGAGTAAGGTTTGTGCCAATGTGTTCTGTGGCGCAGGAAGAGAGTGTGCAGTCACTGAGAAGGGAGAACCCAGCTGCTTGTGTATAGAGagcTGTAAGCCACACAAGCGTTCAGTGTGTGGCAGTAACGGTAAGACATACCGCAACCACTGTGAGCTCCACCGAGACGCATGTCTCACCGGCCTCAAGATCCAGGTGGCCCACGACAGACACTGCCAGGagaagaaagcaGAGCATGCAGCCGCCAGCCCGGTGGTGTGTTATGTAGCAGATCGTAATGAGTTGAGGCACCGTGTGATCCAGTGGCTGCAGACTGAGGTGGTCCCAGACGGCTGGTTTGTCAAAGGCTCCAACTTCACTGAAATCCTGGTGAAATacttcaagaactACGACAATGGTGACTCCCTGCTGGACTCCTCAGAGCTCCTTAAGTTCATCCAACATAATGACTCCAACGTGGACATGCAGTCATATGCAGACCAGGAGAGCAACAAGCTgctcagGAGCCTATGTGTGGACGCTCTGATCGAGATGTCCGATGAGAACACTGACTGGAAGCTGAGCTTCGATGAGTTCCTCAACTGCCTGAAGCCCGGCTTCAACCCACCTGAGAAGAAGTGTGCCCTGGAGGATGAGACCTATAAGGATGGGGCTGAGACACAGGTGGAGTGTAAccgctgtgtgtgtgcctgcggcAACTGGGTCTGCACCGCCATGACCTGCAATGATAAGACAGCGGTCGTCGAGGAGACCGGGGAGGCAGGGCAGGAGATGACCGAGGAGGAATGGAGCCTCCGTGTGGCAGAGCTCAACAAGCACCAGGAAACAGTGGAGAAGATGAAGGTCAGCACAAAGGAGGCCTAAGATGCCTAAAGAAGGAGGgtgtgaaggaaagagagagagagaaaagacttCACTCTTCTTCCATTGATAAGGCCCTGTGTTGTTCCTGAATTTACTCATATGTTAATTATTATAGCTTTTTGTTTATGTGTGTTAGATGCAGGGCAGTCAAGAGtattatttggggagtttcttgaGTTATGTTCTATTGTTTTACTGCACCCCTGCACTAGGAATGGGGCCATTTTTACTGCTGACTTTTTAAATATTGTTTTTCTATCtacacattataaacacagtatttgttgttatgttttattttttttgtaaaatagCAAGCGGTAAATAGTTGGCGATGAGAAACATTTGAGATGTTTGGAGTGAATTGTTGGGACACCTTTCTCCATCAAGGAAATAAACTCACCTTTAAAGTCCTTTCAGATGTGTTAGAGAAATGTTGAGCAAGACCATGATAGTGTCTCATTGTAGGGGAAGGGGATGTCTTACTATGATACTTGATACTACTTGACAAATGCACTTCTCCCTCCATGACTAGCAGCATAGTTTCAGGCCTTAGTGGATTGTCCCGTTTAGTTAGAATCCTTTGCTTTTTGGCAAATGTGTTTGCGTCTATGTACAATTTGTTATATGCTTGATTTGGAGATCATATGTGATTGCAATGGCTCCTGTGCTATATTCCGTCGGCTCTCTCTGGTgcttgttttagaaacattaaaGCGTAGATTGTAGAATGAAAGCAACTAGCACCAAGCACAGAGCTGAGTACAGCATGGAGAGAACTAAAACCAAAGCCTGACGATGACTAGGATGTTGATGTATGAACCCCTCCAGGCAAAGCATTTCTCTGGACCCAGCAACAACACTATACCTGTGCTTGTCAAATATCAGTCATAAGGATTAGCCTCGCTGTCAGCTAATGTAGCTTAGATGCATCTCTAACTCAGAGTGCATgcttaaataaaataatgtgtGTCTGTAATGAAGGAGTGTTTTTGAGAGAGTGTGTACTGCCTACAATTGTGTGGTGGTGTGTCATATTTGTTTTGTTATGTTTTATTTGTCAAAAGTCCCACTTATCTTGAGAATCGTTTCTGGTTATATCAGTGCCTTAAAACCCAAACATAGGCCTGCAGAGACACTGTAGAGGTCGCGTGTCCTGCAACCTTTAAACCACAATTGGAATGGGCAAGACTATTCTTGGCAGAATTTTGGTATAGATTTTGGAGCTATGTGGTTTAGTCCTTGTTAAATGTTTGTGTAAAAGTTGAATAGCTAGGTTAAAACTAGGTTTATATTCTAAAATGAATGCAGAGTCTATAATGAATATGTATGTCAATAAAATAAAACCCATACAGTACTA

Function

NR:

description
follistatin-related protein 1-like

GO: NA

KEGG:

id description
K23912 FSTL1; follistatin-related protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975016.1 True 2452 mRNA 0.45 11 67944878 67980956

Neighbor

gene id symbol gene type direction distance location
LOC110520459 LOC106586086 coding upstream 57539 67881416 ~ 67887339 (+)
LOC118936465 LOC106586642 coding upstream 210832 67726893 ~ 67734046 (+)
LOC110504522 LOC106586570 coding upstream 341646 67599901 ~ 67603232 (+)
LOC118964316 NA coding upstream 422161 67521551 ~ 67522717 (+)
LOC110505416 LOC106586647 coding upstream 424716 67519326 ~ 67520162 (+)
lrrc58b LOC106586648 coding downstream 1375 67982331 ~ 67989941 (+)
LOC110520463 LOC106586649 coding downstream 21349 68002305 ~ 68037956 (+)
LOC110504531 LOC106586650 coding downstream 77159 68058115 ~ 68114677 (+)
si:ch211-214p13.9 cd200r1 coding downstream 192692 68173648 ~ 68177773 (+)
LOC110520465 btla coding downstream 235329 68216285 ~ 68221416 (+)
G289586 NA non-coding upstream 2698 67941945 ~ 67942180 (+)
G289585 NA non-coding upstream 3895 67940782 ~ 67940983 (+)
G289578 NA non-coding upstream 16943 67927679 ~ 67927935 (+)
G289574 NA non-coding upstream 20285 67924329 ~ 67924593 (+)
G289572 NA non-coding upstream 24913 67919699 ~ 67919965 (+)
G289619 NA non-coding downstream 18143 67999099 ~ 67999378 (+)
G289645 NA non-coding downstream 51908 68032864 ~ 68033231 (+)
G289828 NA non-coding downstream 60173 68041129 ~ 68041899 (+)
G289840 NA non-coding downstream 76101 68057057 ~ 68057280 (+)
G289881 NA non-coding downstream 199106 68180062 ~ 68183196 (+)
G289517 NA other upstream 182455 67761737 ~ 67762423 (+)
G289486 NA other upstream 262756 67678862 ~ 67682122 (+)
G289455 NA other upstream 312668 67625353 ~ 67632210 (+)
G289116 NA other upstream 465949 67474973 ~ 67478929 (+)
G289883 NA other downstream 242769 68223725 ~ 68225306 (+)
LOC110520478 LOC106586673 other downstream 1645387 69625755 ~ 69635303 (+)
G291327 NA other downstream 1714439 69695395 ~ 69695836 (+)
LOC110520485 dynlt3 other downstream 1881104 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 other downstream 1938226 69915810 ~ 69923807 (+)

Expression


Co-expression Network