Item | Value |
---|---|
gene id | LOC110520466 |
gene name | cd200 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 68227272 ~ 68253241 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
cd200 | Predicted to enable protein binding activity involved in heterotypic cell-cell adhesion. Involved in several processes, including negative regulation of matrix metallopeptidase secretion; positive regulation of arginase activity; and regulation of DNA-binding transcription factor activity. Located in axon; cell surface; and neuronal cell body. |
description |
---|
OX-2 membrane glycoprotein-like isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021597804.2 | False | 4078 | mRNA | 0.44 | 8 | 68227272 | 68253241 |
XM_021597805.2 | False | 4073 | mRNA | 0.44 | 8 | 68227272 | 68253241 |
XM_021597806.2 | False | 4243 | mRNA | 0.44 | 9 | 68227272 | 68253241 |
XM_021597808.2 | True | 4238 | mRNA | 0.44 | 9 | 68227272 | 68253241 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
si:ch211-214p13.7 | NA | coding | downstream | 18598 | 68206330 ~ 68208674 (-) |
nr1i2 | nr1i2 | coding | downstream | 79507 | 68125603 ~ 68147765 (-) |
LOC110520458 | LOC106586647 | coding | downstream | 310414 | 67900356 ~ 67916858 (-) |
LOC110520455 | LOC106586642 | coding | downstream | 345854 | 67836705 ~ 67881418 (-) |
LOC118944713 | LOC106592868 | coding | downstream | 440423 | 67776411 ~ 67786849 (-) |
LOC110520467 | LOC106586653 | coding | upstream | 25331 | 68278572 ~ 68292750 (-) |
LOC110520470 | LOC106586656 | coding | upstream | 202220 | 68455461 ~ 68460579 (-) |
LOC110520471 | NA | coding | upstream | 331231 | 68584472 ~ 68586742 (-) |
LOC110520474 | LOC106586664 | coding | upstream | 1007262 | 69260503 ~ 69277276 (-) |
LOC110520476 | LOC106586666 | coding | upstream | 1127226 | 69380467 ~ 69469698 (-) |
G290064 | NA | non-coding | downstream | 1938 | 68223448 ~ 68225334 (-) |
G289985 | NA | non-coding | downstream | 133514 | 68093038 ~ 68093758 (-) |
G289841 | NA | non-coding | downstream | 169987 | 68056985 ~ 68057285 (-) |
G289836 | NA | non-coding | downstream | 176743 | 68050232 ~ 68050529 (-) |
G289835 | NA | non-coding | downstream | 178618 | 68048367 ~ 68048654 (-) |
G290137 | NA | non-coding | upstream | 15212 | 68268453 ~ 68268667 (-) |
G290144 | NA | non-coding | upstream | 31912 | 68285153 ~ 68285759 (-) |
G290154 | NA | non-coding | upstream | 53809 | 68307050 ~ 68307310 (-) |
G290155 | NA | non-coding | upstream | 54160 | 68307401 ~ 68307710 (-) |
G290163 | NA | non-coding | upstream | 65032 | 68318273 ~ 68318828 (-) |
G289653 | LOC106607871 | other | downstream | 341040 | 67883752 ~ 67886232 (-) |
G289678 | NA | other | downstream | 593779 | 67626832 ~ 67633493 (-) |
G288578 | NA | other | downstream | 1384391 | 66842671 ~ 66842881 (-) |
G287112 | NA | other | downstream | 2646777 | 65579791 ~ 65580495 (-) |
G290542 | NA | other | upstream | 325862 | 68579103 ~ 68580707 (-) |
G290567 | NA | other | upstream | 373091 | 68626332 ~ 68647620 (-) |
G290598 | NA | other | upstream | 457126 | 68710367 ~ 68717385 (-) |
G290602 | NA | other | upstream | 468567 | 68721808 ~ 68724914 (-) |
G290713 | LOC106586659 | other | upstream | 593370 | 68846611 ~ 68850854 (-) |