LOC110520471


Basic Information

Item Value
gene id LOC110520471
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68584472 ~ 68586742 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002472988.2
agattggttctcaattagaggcagctgtttatcgttgtctctgattgggaaccatatttaggcagccatcttctttgggcatttcgtgggttattgtctatgtgtagttgcctgtacTCGGTGTCATAGCGTCACGGtctgttgtttttgtttaatgcaatagaatcctactctaATGCTCTATATTGCAcagttagttttgcatactaatAAGTCTTACATAGTTTGTTTTGGTATGTAACATTGAAAGTGGCACATTTTTCTCTAACTGAAACAATTCCTAAAGTAGAGCGAAATCTTAATTGTTTTAACTAAAGGGAAAAACTGCTCTTCTGcattggctgattttccttcttCTCAGCAGTCAGGGGAGCTACACGCCCACTGGTTAACGAGGAAATACTTTATTTATATTGTACGGGATGCTTGTCAAATAGATACATTGCCCTTCGTCTGTTCAAAAAGGACCAAGTTGTTGCGATCACAATACCAACCAGAGGGCAAAAATATCTTGAAAGACTGGTTGCGAGCAGCTTTTAGTGAGTGGTAATGAGGTGACCAATAGTGGTTGCAATTGAGATCAGCTATGCAGGTGAATTTATGCTTATTAATGGTTTAACGAGACAGCAGCTGGCGATAATAAGGATGCTGCCTTTTGAAGCAGAATTTCTAGGgtggggtagggatgtcccaaggctACCAGACAGCACGGACCTAATTTATCGTTAGGACCTCAACATTGGCGTGTCACTATCCCACAACACCTTGTGGCGCAGCGAACAATTTCTGAATTAATGGCAGACAGAAGTCCTCGCTTGGGATACCATTTTCCAGAAGAATAAGGAATAACTTCATGAAATGTTGACGGACATCCCACCCTGACACCCTGCAGATGTAAATAACTTGGTGTTAACCTCCCAGGCACCAGGAAATCACCATATCCAAGGATATTATTCAGAACACCACAATGTTAGATAGAAATAGATTTGATTATCATGCAAATTTGTTAGGACATTGTAATGTATGATGTGCATTCTAAAATGGAGATGTGATTTCTGTCCCAGGGAATAGCATTGTGTGCAACTTTTCAATTCGGATCACAATTAGTTGAATTAGGTGTTACTGAAGGGCTGGAACAAAAACTTAGGACTTATGCACAGATACAGGAAAACTTGTTAAGATTATTCTAAATTGTAAGTGTTGATGTCTCCACGTTTCTGGTTTTGAGGCTTGGGCATCTAGTAtctgcagttcatctgtctaatcccctgcaaggagagagaaaggcttCAATACTATTACAATGCTCTATTCATTTGATTGAAAGTATTCATGTTTTATATGCATTCATATCATTTTATTAGATATATTATCCTTCATCAAATGCCAGTATTTGTTTTGTATCCAAAGCATCTAGTTTATATTAGGATGAAGTAGCCTAGGCCTCTAATCTAGTTAGATTGCATCATATCACTTTTCAATAAATATCAAACCA

Function

NR:

description
PREDICTED: transmembrane protein FAM155A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002472988.2 True 1495 mRNA 0.39 3 68584472 68586742

Neighbor

gene id symbol gene type direction distance location
LOC110520470 LOC106586656 coding downstream 123893 68455461 ~ 68460579 (-)
LOC110520467 LOC106586653 coding downstream 291722 68278572 ~ 68292750 (-)
LOC110520466 cd200 coding downstream 331231 68227272 ~ 68253241 (-)
si:ch211-214p13.7 NA coding downstream 375798 68206330 ~ 68208674 (-)
nr1i2 nr1i2 coding downstream 436707 68125603 ~ 68147765 (-)
LOC110520474 LOC106586664 coding upstream 673761 69260503 ~ 69277276 (-)
LOC110520476 LOC106586666 coding upstream 793725 69380467 ~ 69469698 (-)
LOC110520477 LOC106586672 coding upstream 1009095 69595837 ~ 69614655 (-)
LOC110520480 ube2al coding upstream 1054524 69641214 ~ 69644739 (-)
ankrd10b LOC106586677 coding upstream 1062795 69649537 ~ 69675010 (-)
G290539 NA non-coding downstream 11163 68573110 ~ 68573309 (-)
G290534 NA non-coding downstream 28370 68555217 ~ 68556102 (-)
G290526 NA non-coding downstream 44675 68539416 ~ 68539797 (-)
G290520 NA non-coding downstream 56284 68527933 ~ 68528188 (-)
G290519 NA non-coding downstream 56963 68527281 ~ 68527509 (-)
G290597 NA non-coding upstream 124271 68711013 ~ 68715853 (-)
G290599 NA non-coding upstream 136157 68722899 ~ 68727546 (-)
G290623 NA non-coding upstream 168668 68755410 ~ 68755852 (-)
G290672 NA non-coding upstream 227744 68814486 ~ 68814889 (-)
G290673 NA non-coding upstream 228270 68815012 ~ 68815236 (-)
G290542 NA other downstream 3765 68579103 ~ 68580707 (-)
G289653 LOC106607871 other downstream 698240 67883752 ~ 67886232 (-)
G289678 NA other downstream 950979 67626832 ~ 67633493 (-)
G288578 NA other downstream 1741591 66842671 ~ 66842881 (-)
G290567 NA other upstream 39590 68626332 ~ 68647620 (-)
G290598 NA other upstream 123625 68710367 ~ 68717385 (-)
G290602 NA other upstream 135066 68721808 ~ 68724914 (-)
G290713 LOC106586659 other upstream 259869 68846611 ~ 68850854 (-)
G291138 NA other upstream 669263 69256005 ~ 69256544 (-)

Expression


Co-expression Network