Item | Value |
---|---|
gene id | LOC110520478 |
gene name | LOC106586673 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 69625755 ~ 69635303 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036975029.1 | False | 2460 | mRNA | 0.50 | 11 | 69625755 | 69634272 |
XM_036975030.1 | False | 2667 | mRNA | 0.48 | 10 | 69625759 | 69634272 |
XM_021597823.2 | False | 1995 | mRNA | 0.48 | 10 | 69625761 | 69634272 |
XM_036975028.1 | False | 2869 | mRNA | 0.51 | 11 | 69625762 | 69635303 |
XM_021597822.2 | False | 3121 | mRNA | 0.50 | 11 | 69625764 | 69634272 |
TU330151 | True | 1342 | TUCP | 0.54 | 2 | 69626343 | 69630369 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110520475 | LOC106586671 | coding | upstream | 29957 | 69469776 ~ 69595798 (+) |
LOC110504559 | LOC106586663 | coding | upstream | 459363 | 68942535 ~ 69172271 (+) |
LOC110504548 | NA | coding | upstream | 767018 | 68854772 ~ 68858737 (+) |
LOC110520472 | LOC106586659 | coding | upstream | 775440 | 68846508 ~ 68850315 (+) |
LOC110504539 | LOC106586655 | coding | upstream | 1260273 | 68324426 ~ 68365482 (+) |
LOC118964360 | NA | coding | downstream | 41207 | 69676510 ~ 69676663 (+) |
LOC110504569 | rpgr | coding | downstream | 77045 | 69712348 ~ 69731657 (+) |
LOC110504579 | LOC106582139 | coding | downstream | 96456 | 69731759 ~ 69769646 (+) |
LOC110520485 | dynlt3 | coding | downstream | 226591 | 69861894 ~ 69870212 (+) |
LOC110504602 | LOC106586683 | coding | downstream | 280507 | 69915810 ~ 69923807 (+) |
G291274 | NA | non-coding | upstream | 88497 | 69534421 ~ 69537258 (+) |
G291261 | NA | non-coding | upstream | 118277 | 69499548 ~ 69507478 (+) |
G291182 | NA | non-coding | upstream | 307570 | 69317897 ~ 69318185 (+) |
G291178 | NA | non-coding | upstream | 313937 | 69311606 ~ 69311818 (+) |
G291155 | NA | non-coding | upstream | 326819 | 69298647 ~ 69298936 (+) |
G291326 | NA | non-coding | downstream | 58712 | 69694015 ~ 69694249 (+) |
G291331 | NA | non-coding | downstream | 64445 | 69699748 ~ 69701720 (+) |
G291345 | NA | non-coding | downstream | 84705 | 69720008 ~ 69720786 (+) |
G291353 | NA | non-coding | downstream | 105235 | 69740538 ~ 69740934 (+) |
G291354 | NA | non-coding | downstream | 105677 | 69740980 ~ 69741802 (+) |
G289883 | NA | other | upstream | 1400449 | 68223725 ~ 68225306 (+) |
G289517 | NA | other | upstream | 1863332 | 67761737 ~ 67762423 (+) |
G289486 | NA | other | upstream | 1943633 | 67678862 ~ 67682122 (+) |
G289455 | NA | other | upstream | 1993545 | 67625353 ~ 67632210 (+) |
LOC110505416 | LOC106586647 | other | upstream | 2105785 | 67519326 ~ 67520162 (+) |
G291327 | NA | other | downstream | 60092 | 69695395 ~ 69695836 (+) |
G291461 | NA | other | downstream | 314364 | 69949667 ~ 69952168 (+) |
LOC110520493 | LOC106586690 | other | downstream | 422237 | 70057383 ~ 70070470 (+) |
LOC110520479 | LOC106586674 | coding | downstream | 4211 | 69634580 ~ 69640723 (+) |