LOC118964360


Basic Information

Item Value
gene id LOC118964360
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 69676510 ~ 69676663 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118964360
ATATTTGTACTGAAATCAGTAGCCCTTCACGGACATATCACCCAGGGTGAGGATCAGCAATTGCACTCCGATTGACCGCTACGAATTTCCCAAATGTggaaatctcaatttaatcatttctgctagtgtgggactgcgttcgcgctctcccctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118964360 True 154 mRNA 0.47 1 69676510 69676663

Neighbor

gene id symbol gene type direction distance location
LOC110520479 LOC106586674 coding upstream 35787 69634580 ~ 69640723 (+)
LOC110520478 LOC106586673 coding upstream 41207 69625755 ~ 69635303 (+)
LOC110520475 LOC106586671 coding upstream 80712 69469776 ~ 69595798 (+)
LOC110504559 LOC106586663 coding upstream 510118 68942535 ~ 69172271 (+)
LOC110504548 NA coding upstream 817773 68854772 ~ 68858737 (+)
LOC110504569 rpgr coding downstream 35685 69712348 ~ 69731657 (+)
LOC110504579 LOC106582139 coding downstream 55096 69731759 ~ 69769646 (+)
LOC110520485 dynlt3 coding downstream 185231 69861894 ~ 69870212 (+)
LOC110504602 LOC106586683 coding downstream 239147 69915810 ~ 69923807 (+)
LOC110520491 LOC106586687 coding downstream 303605 69980268 ~ 70034765 (+)
G291163 NA non-coding upstream 34480 69563664 ~ 69642030 (+)
G291274 NA non-coding upstream 139252 69534421 ~ 69537258 (+)
G291261 NA non-coding upstream 169032 69499548 ~ 69507478 (+)
G291182 NA non-coding upstream 358325 69317897 ~ 69318185 (+)
G291178 NA non-coding upstream 364692 69311606 ~ 69311818 (+)
G291326 NA non-coding downstream 17352 69694015 ~ 69694249 (+)
G291331 NA non-coding downstream 23085 69699748 ~ 69701720 (+)
G291345 NA non-coding downstream 43345 69720008 ~ 69720786 (+)
G291353 NA non-coding downstream 63875 69740538 ~ 69740934 (+)
G291354 NA non-coding downstream 64317 69740980 ~ 69741802 (+)
G289883 NA other upstream 1451204 68223725 ~ 68225306 (+)
G289517 NA other upstream 1914087 67761737 ~ 67762423 (+)
G289486 NA other upstream 1994388 67678862 ~ 67682122 (+)
G289455 NA other upstream 2044300 67625353 ~ 67632210 (+)
G291327 NA other downstream 18732 69695395 ~ 69695836 (+)
G291461 NA other downstream 273004 69949667 ~ 69952168 (+)
LOC110520493 LOC106586690 other downstream 380877 70057383 ~ 70070470 (+)

Expression


Co-expression Network