XLOC_021724 (CT573349.1)


Basic Information

Item Value
gene id XLOC_021724
gene name CT573349.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 26928743 ~ 26928858 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043112
TTTagtcagctagctctctgcaactctcacatggtcgcccacagaagctaagcagggctgtgaccggtcagtacctggatgggagaccacataggaaagttaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108672

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043112 True 116 rRNA 0.53 1 26928743 26928858

Neighbor

gene id symbol gene type direction distance location
XLOC_021723 zgc:158263 coding upstream 177465 26733232 ~ 26751278 (+)
XLOC_021722 NA coding upstream 303610 26591124 ~ 26625133 (+)
XLOC_021721 si:ch73-206d17.1 coding upstream 426222 26491931 ~ 26502521 (+)
XLOC_021720 ptpn22 coding upstream 748204 26142613 ~ 26180539 (+)
XLOC_021719 si:dkey-78k11.4 coding upstream 825948 26102028 ~ 26102795 (+)
XLOC_021725 cacnb3b coding downstream 17571 26946429 ~ 26959206 (+)
XLOC_021726 rnd1b coding downstream 50316 26979174 ~ 27006062 (+)
XLOC_021727 ptges3a coding downstream 123061 27051919 ~ 27059998 (+)
XLOC_021728 mipa coding downstream 139367 27068225 ~ 27072774 (+)
XLOC_021729 tmprss12 coding downstream 416968 27345826 ~ 27350829 (+)
XLOC_021714 AL845287.1 non-coding upstream 933602 25995027 ~ 25995141 (+)
XLOC_021691 BX957326.2 non-coding upstream 2367870 24556455 ~ 24560873 (+)
XLOC_021689 NA non-coding upstream 2436706 24483312 ~ 24492037 (+)
XLOC_021687 CR925709.3 non-coding upstream 2779972 24148055 ~ 24148771 (+)
XLOC_021731 NA non-coding downstream 580009 27508867 ~ 27516273 (+)
XLOC_021738 NA non-coding downstream 941881 27870739 ~ 27872705 (+)
XLOC_021742 NA non-coding downstream 1210901 28139759 ~ 28277430 (+)
XLOC_021745 NA non-coding downstream 1461811 28390669 ~ 28420584 (+)
XLOC_021747 dre-let-7g-2 non-coding downstream 1607503 28536361 ~ 28536457 (+)

Expression


Co-expression Network