Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964359 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 70220330 ~ 70220464 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118964359 | True | 135 | mRNA | 0.44 | 1 | 70220330 | 70220464 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520496 | LOC106586692 | coding | downstream | 84798 | 70125298 ~ 70135532 (-) |
| LOC110520492 | LOC106586689 | coding | downstream | 171937 | 70035040 ~ 70048393 (-) |
| LOC110520490 | LOC106586686 | coding | downstream | 249157 | 69949665 ~ 69971173 (-) |
| piga | LOC106586684 | coding | downstream | 281474 | 69933697 ~ 69938856 (-) |
| asb11 | LOC106586685 | coding | downstream | 286970 | 69927661 ~ 69933360 (-) |
| LOC110520510 | tfg | coding | upstream | 550692 | 70771156 ~ 70806540 (-) |
| jagn1a | LOC106586704 | coding | upstream | 586885 | 70807349 ~ 70810049 (-) |
| LOC110520512 | col8a1 | coding | upstream | 590140 | 70810604 ~ 70837491 (-) |
| LOC118964322 | NA | coding | upstream | 676045 | 70896509 ~ 70907574 (-) |
| tmem30c | LOC106586702 | coding | upstream | 724570 | 70945034 ~ 70950599 (-) |
| G292256 | NA | non-coding | downstream | 4583 | 70215399 ~ 70215747 (-) |
| G292252 | NA | non-coding | downstream | 10150 | 70209567 ~ 70210180 (-) |
| G292211 | NA | non-coding | downstream | 56321 | 70122859 ~ 70164009 (-) |
| G292215 | NA | non-coding | downstream | 91206 | 70128581 ~ 70129124 (-) |
| G292214 | NA | non-coding | downstream | 99601 | 70120408 ~ 70120729 (-) |
| G292272 | NA | non-coding | upstream | 23405 | 70243869 ~ 70252589 (-) |
| G292274 | NA | non-coding | upstream | 27721 | 70248185 ~ 70248966 (-) |
| G292277 | NA | non-coding | upstream | 63192 | 70283656 ~ 70284188 (-) |
| G292286 | NA | non-coding | upstream | 76011 | 70296475 ~ 70296816 (-) |
| G292294 | NA | non-coding | upstream | 90271 | 70310735 ~ 70311012 (-) |
| G291977 | NA | other | downstream | 112380 | 70107540 ~ 70107950 (-) |
| G291901 | LOC106586687 | other | downstream | 223725 | 69980346 ~ 69996605 (-) |
| G291138 | NA | other | downstream | 963786 | 69256005 ~ 69256544 (-) |
| G290713 | LOC106586659 | other | downstream | 1369476 | 68846611 ~ 68850854 (-) |
| G290602 | NA | other | downstream | 1495416 | 68721808 ~ 68724914 (-) |
| G292753 | NA | other | upstream | 499572 | 70720036 ~ 70720591 (-) |
| G292919 | NA | other | upstream | 807155 | 71027619 ~ 71040152 (-) |
| G293984 | NA | other | upstream | 1682850 | 71903314 ~ 71903908 (-) |
| LOC110504660 | LOC106582021 | other | upstream | 1952585 | 72121974 ~ 72206818 (-) |
| G294451 | NA | other | upstream | 2350785 | 72571249 ~ 72575432 (-) |
