tmem30c (LOC106586702)



Basic Information


Item Value
gene id tmem30c
gene name LOC106586702
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70945034 ~ 70950599 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036975070.1
GTCTGGTTTGTCATAACATCCTGTGTGTAAGTGTGTTCTGAAACAGACAAAGGCAACTACTTCAGTGGGGAAGAAATAACGGATCGTAAGGTGCTGTGGGAAAATAAATCTGAGATATTTTAGTACTTGGATGATGGGCTGTAATacatcagtgtgtatgtatgtatgactgAATCGCTCGGGAAGGAGTGAGCGAAGAACAgtagaaaaaaaacaaaagagGAAGTAGAGCAGAGGATTCTGGTTAATGAGTAACTGCCAGCAGCCTGTCTCAAAGGTCTTCCCCACCCTAGCCCTAAGCCTGCTGGGAAAAGGCTCTTGGCAGGCAGGGGAGCGAGGTAGAGAAATGCTGATAAGACTGCGTTAAAGAAGAccggaagagaagagagggaagactCCTGTTCCTTGCTTGTTTTCTTGTTGTCTGACTTTCCTGGTCTCATCACCCTTCCCCAGCCGGAGCTCTCTGTCATGGGCAAGGCGAAGGCCAACGCTGGGCCCCTGGCCCGGAGGCCTGATAACTCTGCTTTCAAACAGCAGAGACTGCCTGCCTGGTCCCCCATGCTCACAGCTCAAACCGTCCTGCCTTTCTTCTACGGTATGGCcattgtgtgtgtgctgctggGAGCGTGGCTACTTGTCACCGTGCAGAATACACATGAACTGAAGGTAGACTACACACACGCAGGGTCATGTGATAAGTGTTTTGAGAAGCGTAAAGACCGTGCCAATGCGAACCAGAGCTGCAACTGCACTGTGGTGTTTAACATTGAGAACATGTTCAagGGAGATGTGTTCTTCTATTACGGCCTGATCAACTTCCACCAGAACCTCCGGCAATACATGGACTCCAGGGATGATGGACAGATGATTGGGAGAAATAAAAACCTCAGGaaCCCGAGCTCCTATTGCGAGCCCTTCATAAAGGATAAGAACGGACTCCCTATTGCCCCTTGTGGGGCTGTGGCCAACAGCATGTTCAACGACTCCTTCACTCTGGTGTACCACTCAGCAGCGGGCAGTCGGGTGGTTCCTCTATTCAGGAAGGGCATCACCTGGTACACCGACAAGAACGTCAAGTTCCGTAACCCACAGGTGGAGAACAAAACCCTAACGTTAGCACAGGTGTTTGAAGGCACGGGCCAGCCTCTGTACTGGCAGAAGCCCGTGTATGACCTGGACCCCTGGGACCGCAACAACAACGGCTTCATCAACGAGGACCTCATCGTGTGGATGAGGGAGGCTGCCTTCCCCAACTTCAAGAAGCTCTACGGGGTCCTGAATCGAGCCATAGAACCCTTCACCGATGGGCTGCCGGCTGGAAACTACAGCGTCCTTATCTCCTACAACTTCCCAGTGGAGTACTTCCAGGGCAGAAAGGAAGTGGTCCTGTCCACAGTCAGCTGGTTTGGGGGTCAGAACAACTTCCTGCCCGTAGCCTACCTGGTCACAGGCTGTCTCATCCTGCTCCTCGCTGTCATCCTCACCGCCGTCTGGTGGAAGTTTGGTAAGAACGGACGGAATATGGAGGAGTGATGAAAAGGTGACGAAGAAGAGGAGACATGGAATTCataatactgtagatacagtgaaTGTGATTATTAAAATGGTCAATGGTCTACATTTATGTAGTTCTGGATTAGAGATGGGGTTTGTGTTTTCAGCATCATGAATGCTTGTACTTGGTTTAATTTCCCTGCATGACCATGTGGTGGCAGTAGTGCGGTTAGAATGAAACGAGGTGGGAAACCATAGGAAATTGTTTTCAGTGATAATTTATGTCAGTGTTTGAATATGcattaaagacatgctctggaaCGTTG

Function


NR:

description
cell cycle control protein 50C-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036975070.1 True 1823 mRNA 0.50 7 70945034 70950599

Neighbor


gene id symbol gene type direction distance location
LOC118964322 NA coding downstream 37460 70896509 ~ 70907574 (-)
LOC110520512 col8a1 coding downstream 107543 70810604 ~ 70837491 (-)
jagn1a LOC106586704 coding downstream 134985 70807349 ~ 70810049 (-)
LOC110520510 tfg coding downstream 138494 70771156 ~ 70806540 (-)
LOC118964359 NA coding downstream 724570 70220330 ~ 70220464 (-)
cmss1 cmss1 coding upstream 82 70950681 ~ 71009719 (-)
LOC118964323 NA coding upstream 721860 71672459 ~ 71676171 (-)
LOC110520517 LOC106586722 coding upstream 757883 71708482 ~ 71716359 (-)
LOC110504652 LOC106586714 coding upstream 803680 71754279 ~ 71764744 (-)
rnaseh2b rnaseh2b coding upstream 823431 71774030 ~ 71785013 (-)
G292773 NA non-coding downstream 200912 70743342 ~ 70744122 (-)
G292686 NA non-coding downstream 329486 70613960 ~ 70615548 (-)
G292669 NA non-coding downstream 363940 70579424 ~ 70581094 (-)
G292420 NA non-coding downstream 370775 70573179 ~ 70574259 (-)
G292384 NA non-coding downstream 380379 70555501 ~ 70564655 (-)
G292927 NA non-coding upstream 90561 71041160 ~ 71041699 (-)
G292931 NA non-coding upstream 93041 71043640 ~ 71043881 (-)
G293042 NA non-coding upstream 212139 71162738 ~ 71172116 (-)
G293046 NA non-coding upstream 217658 71168257 ~ 71172419 (-)
G293043 NA non-coding upstream 220087 71170686 ~ 71174999 (-)
G292753 NA other downstream 224443 70720036 ~ 70720591 (-)
G291977 NA other downstream 837084 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 948429 69980346 ~ 69996605 (-)
G291138 NA other downstream 1688490 69256005 ~ 69256544 (-)
G290713 LOC106586659 other downstream 2094180 68846611 ~ 68850854 (-)
G292919 NA other upstream 77020 71027619 ~ 71040152 (-)
G293984 NA other upstream 952715 71903314 ~ 71903908 (-)
LOC110504660 LOC106582021 other upstream 1222450 72121974 ~ 72206818 (-)
G294451 NA other upstream 1620650 72571249 ~ 72575432 (-)
G294697 NA other upstream 1824808 72775407 ~ 72776607 (-)

Expression



Co-expression Network