LOC110520513 (LOC106586698)


Basic Information

Item Value
gene id LOC110520513
gene name LOC106586698
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 70962179 ~ 71002292 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597892.2
CTACACACTCTccgtctcacacagacacacacatccccctccctttccttctatcTGGACATCTTTGAGGAAATGTGAGGacacaaaagagagagaaaagagaataaaGGAGAAGACAAAACGTGGACCAGAAGAGCGCAGAAGAAGGGGGGAAAGGAGGGGGATCACTTTATTGGATGACAGTGAAGGAGAAGGAGGACCAGACGGAGTAGCACAGCCAAGGCCTCACCTGTCTGGTCCATCAGTCCTGCAGgtgCGTCCCCATAGCAACAGCTCTAACATGGCCGCCCGGAATGGCTATGGTTCACAGAACTCCGTGGCCCACCTAGACTCTCTCAAGGGCACTGTCCTGGGGGACAgcatgggaggagagagggggaaagaccTGTCCAGGGATGACCTTGTGTTCCTCCTCAGTATAATGGAGGGAGAGCTACAGGCAAGAGATGAGGTGATCACGGTGCTGAAAGCAGAGAAAATGGATCTGGCTCTGCTGGAGGCCCAGTATGGCTTTGTCACCACAGGAGAGGTGCTTCGAGCcctgcagagagactcactccaGGACCAGACTTCTGAGGCCCAACAGCAGGATGTCTATGAGAAACCCATGGCTGAGCTGGACCGGTTGGTGGAGACGGGGAACCAGAGCTACAGGCGGATGCTGGAGAAGCTGCTGCAGGTGGAGCGTTCCCATAGTGGCGCCCTCTGCAGGCTGGAGGAGCAGGACCAGCAGCACCGCGCCTTCATGCAGCGCAGCGACGACCTCACCTGCCTACTGGAGCAGGACCGTGAGAGGCTGAAGCTGCTGCTCATCCAGGAGAAAGCCTATAGGGAAAGAAAGGAGgaaaagagcgagaaagaggtcTCTGCTTTAAAGGAAGAGCTGACTAAACTCAAGTCTTTTGCATTGTTGGTCATTGACGAGCAGCAACGCCTTACAGATCAGCTTTCACAGCAGAGCAAACGTGTCCAGGAACTGACGGACATTGACGGCCACGCCCAACAGGAGCTAAACTCCATCCATTCCAGGGCAAAGGAGCAGGAGCTTAAAGTAATTCGCTTGGAAGCAGAGTTACGCGAACAAGCTTCCCACTTCCACCTCAACCAGGAAGCCATGATGGCCAAACTGGCCAATGAGGATGCCCAGAACCGACAGCTGCGTCAGCGGTTGGCCGCCCTCAGCCGACAGCTGGATGAGTTGGAGGGGACAAGGAGCGCCCTCAAGAGGGCAGAGGAGGAGCTGCAGGAGCTGAGGGATAGGCTAAGCCATAGGGGAGAAGGGTGCACAACAACCTCTGGCTTGCTCTCAGAAGTGGAACAGCTGaggaggagagtggtggagatGGAAGGAAACGACGAGGAGCTGATCCGCATGGGAGACCAATGCCGGGACCTAGACCGCAAACTAGGGAGGGAGTCCAGTCAGAGCCGAAGCCTGAAGGCCGAGGTGGACAAGCTGAATGATCGGATCAGTGACCTGGACAGACTGGAGGCGGCTCTGGGAAAAAGCAGGCAGGAGTGCAGTGCACTGAAGGGAAGCCTGGAGAAGGAGAGGGCCAGCACCAAGCAGCTGTCTGGAGAGCTGAATACCCTCAAGGTGCGGGTGAGGGAACTGGAAGTCATCGAGGGCCAGCTGGAAAGATCAGAGGGGGCATTAAGACTGGACTTTGCCAAGTTGAGAACACTCACAGTGGTGTTGGTTGAAGAGAGGAAGAACATGGCCGAGAGAGTCAAGCAAACAGAAGAGAAACTCCTGGAGAAGAAGGATGGGAAATTGCAGGCTGAGCGTGACAGCGTGTCGACAGCCACAGAGAAACTCATTGAGGAGAGCCGCAAGGCACTGAGGTCTAAAgcagagctagaggagaggaTTCAGAGAGTGGCAAAAGACCGGGACGAGCTGCGGTTGAGGCTGAGGGCAGAGGAGGACAGGAGCGGGGGTCTGCAGAGCAAAGTTCGCACCATGAAAAAGATAATTCAGGTCCTGGAGGTCAAAGGGGGGGAGTTCTGTCGAGAAGTCAAGATCCCCGTACTGGACAACACTAACCACTGCTACCAACAAGAAGAGAATAAAGTCAAAGAACTCACCCAGGAGGTAGACAGACTGAGCAGGAGACTCATGCAGAAGGGAGTGGTGGAGGGTGAGCTGATGAAGGCTGAGGAGGACTTTGATTCCCTGGAGATGAGGTGGTTCAAGGAGCAGGAGAGAGCCAGGGCCCTGGCAGTGGAGCTGGAGGAGTCCAGGAAGGAGGTCTCTAAGTACCAGCTGGCAGAGAAGAAGGAGAAAAACCAGGAGCACCTCCTCCTCAGTCGACTTCAGGAGGAGCAGGTCAGGTCTGTCCTCCTCAAAAGGGAGGTGGAGGCTCTCAAGGAGAAGGTCCAGTGGCTGATGGGGACGGAGGATTCCATCTGTCGAGTGCAAATGGACAGCTCTACCCTGCAGAAGAGGCTGACCCAGCAGGAGGTCAGGAACAGGGAGCtggccagagagatggagggactgaCCCATGAGCTGGACAGGTACCGGCGAGTCAGCAAGAGCCTCCGGCCCGGCATGACTGGTCGACGCTTCTTAGACCTCCACCTGTCCACCAAGGAGGTGCAGACGGAGCCTGCAGACACCCTGCCACCTGACTACAAGAGCCTGACTCCGCTGGCGCTCAGCTGTAAACTGTATGAGGAGATCGATGGAGAGGACCCAAATCAAAACGAGGATCTTGACCTTAAGTGCAACTCGCCTCCGCTAACAAGCATTGAAAGCTTGAACCACCAAAACAGTAATGTGAGGCCATTCAGCAAACTTTCACCTAACGACAAGGACAACCCCTATACCATTAACGGCAAATTGTTACAGGGTAACTTTGTCCAGAAAGGAGATGTGACGCTTGCACACACCCCGGGGCAGTCCTTACACATCAAGGTAACGCCGGACCATGGGCACAACACGGCCACACTGGAGATCAGCAGCCCCACCGCCGACAATACCACATCCTATACCAGCACCGCAGTTATCCCCACCAGCGGAGCCCCACCAAAACAGAGATTCACCATCATCCCAAACACTGCCATCTCCCCAGTGGCCAGAACAAAGAGCTCCCTGCCCCCAGAGGGATTTGGCAGCCCTGAAAGagccctctcccctctcaccatGACCCCCATCACTGTAAACTCCCCAGACTCCTCCAGGTCAGCGTCACCTGACTACACCGGCTCTCCCATCCAGATGGTAACAGTCAGTACTGGATCGCTTGAATCCAGTGAGGTCATAGGTCAAGCCATGTTTCGTGTGAGCCCGGAGAGGCGGAACGGTTGGCAGCTCCAGAGGTCTAACAGCACTGGTCCCAGCGTCATCACCACAGAGGACAACAAGATCCACATCCATCTTGGGAGCCCCTATATCCAGTCGATTAACGGTATAACTCAGAGCCAGTCTGGGGGACCGTACCACACCCCCGGACAGGAACCAAGGACGCCAGTACTGACCAATGGCTGCCACATCAAAGGCGGCAGCAAGATCACCAGTAGCATCACCATAACCCCTGCCAACACCCCTGTCGCACGACCCTCATACATTACAGTTCCTGCAATTCTGAAGCCCGGCCCCACCAGGATCCCCAAACCAAAGGCTACAGTATGCCGAGAGGGACAAACAGCACTACTAACACTGGACAGAGCAAAGGACAGCCGCATGCCGCCGCCATGCAATCTGGGAAAACAGTGAACGGTCAGACTGTGTTCAACATGAGAAACTAACCCACCACATTCTGAGCACCACAATAGACACGGCTGGGGTGAATTCAGGGGAAATGTTCAGAACATTGCAGATGGAAAAGATGTAACTACATCTGAGACAATTCCCTATTTTACTAACTAGGGAAATAACACATTGTAGGTGATATAATATTTGAAACCAAATGCTTGCACTAGTGCTGTGTAAATCAATAAAGAATGTATTATGCCATTGGCACAATCTATCAATTTCCTGATGGTCTATTTAAAATCTCTTTTATAGGTGCTACTTTGTATTTTCAGAAAACATCCATAATATATCTGGTGCTAATAGTGTTTCACAC
>XM_021597891.2
AGTGTGTTGAGAACACGTCTCATAATGTTAGTTTTCTGCCTGGAATGCCCACATTGCGAGGAACGCCGGGAAGGAGAGGTGGGTGAGCTGAGGGAATAGGAATTGATCCGAGAGACTTTACAGATAAGGCTGAAGCTGCTGCTCATCCAGGAGAAAGCCTATAGGGAAAGAAAGGAGgaaaagagcgagaaagaggtcTCTGCTTTAAAGGAAGAGCTGACTAAACTCAAGTCTTTTGCATTGTTGGTCATTGACGAGCAGCAACGCCTTACAGATCAGCTTTCACAGCAGAGCAAACGTGTCCAGGAACTGACGGACATTGACGGCCACGCCCAACAGGAGCTAAACTCCATCCATTCCAGGGCAAAGGAGCAGGAGCTTAAAGTAATTCGCTTGGAAGCAGAGTTACGCGAACAAGCTTCCCACTTCCACCTCAACCAGGAAGCCATGATGGCCAAACTGGCCAATGAGGATGCCCAGAACCGACAGCTGCGTCAGCGGTTGGCCGCCCTCAGCCGACAGCTGGATGAGTTGGAGGGGACAAGGAGCGCCCTCAAGAGGGCAGAGGAGGAGCTGCAGGAGCTGAGGGATAGGCTAAGCCATAGGGGAGAAGGGTGCACAACAACCTCTGGCTTGCTCTCAGAAGTGGAACAGCTGaggaggagagtggtggagatGGAAGGAAACGACGAGGAGCTGATCCGCATGGGAGACCAATGCCGGGACCTAGACCGCAAACTAGGGAGGGAGTCCAGTCAGAGCCGAAGCCTGAAGGCCGAGGTGGACAAGCTGAATGATCGGATCAGTGACCTGGACAGACTGGAGGCGGCTCTGGGAAAAAGCAGGCAGGAGTGCAGTGCACTGAAGGGAAGCCTGGAGAAGGAGAGGGCCAGCACCAAGCAGCTGTCTGGAGAGCTGAATACCCTCAAGGTGCGGGTGAGGGAACTGGAAGTCATCGAGGGCCAGCTGGAAAGATCAGAGGGGGCATTAAGACTGGACTTTGCCAAGTTGAGAACACTCACAGTGGTGTTGGTTGAAGAGAGGAAGAACATGGCCGAGAGAGTCAAGCAAACAGAAGAGAAACTCCTGGAGAAGAAGGATGGGAAATTGCAGGCTGAGCGTGACAGCGTGTCGACAGCCACAGAGAAACTCATTGAGGAGAGCCGCAAGGCACTGAGGTCTAAAgcagagctagaggagaggaTTCAGAGAGTGGCAAAAGACCGGGACGAGCTGCGGTTGAGGCTGAGGGCAGAGGAGGACAGGAGCGGGGGTCTGCAGAGCAAAGTTCGCACCATGAAAAAGATAATTCAGGTCCTGGAGGTCAAAGGGGGGGAGTTCTGTCGAGAAGTCAAGATCCCCGTACTGGACAACACTAACCACTGCTACCAACAAGAAGAGAATAAAGTCAAAGAACTCACCCAGGAGGTAGACAGACTGAGCAGGAGACTCATGCAGAAGGGAGTGGTGGAGGGTGAGCTGATGAAGGCTGAGGAGGACTTTGATTCCCTGGAGATGAGGTGGTTCAAGGAGCAGGAGAGAGCCAGGGCCCTGGCAGTGGAGCTGGAGGAGTCCAGGAAGGAGGTCTCTAAGTACCAGCTGGCAGAGAAGAAGGAGAAAAACCAGGAGCACCTCCTCCTCAGTCGACTTCAGGAGGAGCAGGTCAGGTCTGTCCTCCTCAAAAGGGAGGTGGAGGCTCTCAAGGAGAAGGTCCAGTGGCTGATGGGGACGGAGGATTCCATCTGTCGAGTGCAAATGGACAGCTCTACCCTGCAGAAGAGGCTGACCCAGCAGGAGGTCAGGAACAGGGAGCtggccagagagatggagggactgaCCCATGAGCTGGACAGGTACCGGCGAGTCAGCAAGAGCCTCCGGCCCGGCATGACTGGTCGACGCTTCTTAGACCTCCACCTGTCCACCAAGGAGGTGCAGACGGAGCCTGCAGACACCCTGCCACCTGACTACAAGAGCCTGACTCCGCTGGCGCTCAGCTGTAAACTGTATGAGGAGATCGATGGAGAGGACCCAAATCAAAACGAGGATCTTGACCTTAAGTGCAACTCGCCTCCGCTAACAAGCATTGAAAGCTTGAACCACCAAAACAGTAATGTGAGGCCATTCAGCAAACTTTCACCTAACGACAAGGACAACCCCTATACCATTAACGGCAAATTGTTACAGGGTAACTTTGTCCAGAAAGGAGATGTGACGCTTGCACACACCCCGGGGCAGTCCTTACACATCAAGGTAACGCCGGACCATGGGCACAACACGGCCACACTGGAGATCAGCAGCCCCACCGCCGACAATACCACATCCTATACCAGCACCGCAGTTATCCCCACCAGCGGAGCCCCACCAAAACAGAGATTCACCATCATCCCAAACACTGCCATCTCCCCAGTGGCCAGAACAAAGAGCTCCCTGCCCCCAGAGGGATTTGGCAGCCCTGAAAGagccctctcccctctcaccatGACCCCCATCACTGTAAACTCCCCAGACTCCTCCAGGTCAGCGTCACCTGACTACACCGGCTCTCCCATCCAGATGGTAACAGTCAGTACTGGATCGCTTGAATCCAGTGAGGTCATAGGTCAAGCCATGTTTCGTGTGAGCCCGGAGAGGCGGAACGGTTGGCAGCTCCAGAGGTCTAACAGCACTGGTCCCAGCGTCATCACCACAGAGGACAACAAGATCCACATCCATCTTGGGAGCCCCTATATCCAGTCGATTAACGGTATAACTCAGAGCCAGTCTGGGGGACCGTACCACACCCCCGGACAGGAACCAAGGACGCCAGTACTGACCAATGGCTGCCACATCAAAGGCGGCAGCAAGATCACCAGTAGCATCACCATAACCCCTGCCAACACCCCTGTCGCACGACCCTCATACATTACAGTTCCTGCAATTCTGAAGCCCGGCCCCACCAGGATCCCCAAACCAAAGGCTACAGTATGCCGAGAGGGACAAACAGCACTACTAACACTGGACAGAGCAAAGGACAGCCGCATGCCGCCGCCATGCAATCTGGGAAAACAGTGAACGGTCAGACTGTGTTCAACATGAGAAACTAACCCACCACATTCTGAGCACCACAATAGACACGGCTGGGGTGAATTCAGGGGAAATGTTCAGAACATTGCAGATGGAAAAGATGTAACTACATCTGAGACAATTCCCTATTTTACTAACTAGGGAAATAACACATTGTAGGTGATATAATATTTGAAACCAAATGCTTGCACTAGTGCTGTGTAAATCAATAAAGAATGTATTATGCCATTGGCACAATCTATCAATTTCCTGATGGTCTATTTAAAATCTCTTTTATAGGTGCTACTTTGTATTTTCAGAAAACATCCATAATATATCTGGTGCTAATA

Function

NR:

description
filamin A-interacting protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597892.2 False 4073 mRNA 0.54 6 70962179 71002292
XM_021597891.2 True 3395 mRNA 0.53 3 70988478 71002281

Neighbor

gene id symbol gene type direction distance location
LOC110520514 dcbld2 coding upstream 17529 70909357 ~ 70944650 (+)
LOC110520508 abi3bp coding upstream 192672 70711131 ~ 70769507 (+)
LOC110504631 LOC106582154 coding upstream 306298 70612151 ~ 70655881 (+)
LOC110520507 senp7 coding upstream 364721 70576887 ~ 70597458 (+)
LOC118964320 NA coding upstream 397524 70555484 ~ 70564655 (+)
il1rapl1a LOC106586724 coding downstream 277757 71280049 ~ 71706686 (+)
LOC118964324 NA coding downstream 805763 71808055 ~ 71810394 (+)
LOC110520521 LOC106586720 coding downstream 926064 71928356 ~ 71944540 (+)
LOC110520522 LOC106586718 coding downstream 945075 71947367 ~ 71975611 (+)
LOC110520528 NA coding downstream 1001253 72003545 ~ 72008381 (+)
G292433 tfg non-coding upstream 123521 70769942 ~ 70838658 (+)
G292504 NA non-coding upstream 178020 70765447 ~ 70784159 (+)
G292505 NA non-coding upstream 195862 70765959 ~ 70766317 (+)
G292430 NA non-coding upstream 358622 70603181 ~ 70603557 (+)
G292667 NA non-coding downstream 39371 71041663 ~ 71042273 (+)
G292955 NA non-coding downstream 75753 71078045 ~ 71078373 (+)
G292956 NA non-coding downstream 76396 71078688 ~ 71078892 (+)
G293155 NA non-coding downstream 279997 71282289 ~ 71282590 (+)
LOC110520493 LOC106586690 other upstream 891822 70057383 ~ 70070470 (+)
G291461 NA other upstream 1010011 69949667 ~ 69952168 (+)
LOC110504602 LOC106586683 other upstream 1040060 69915810 ~ 69923807 (+)
LOC110520485 dynlt3 other upstream 1091967 69861894 ~ 69870212 (+)
G293204 NA other downstream 363891 71366183 ~ 71366423 (+)
G293450 NA other downstream 735513 71737805 ~ 71738175 (+)
G294147 NA other downstream 1246668 72248960 ~ 72249987 (+)

Expression


Co-expression Network