Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964323 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 71672459 ~ 71676171 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051369.1 | True | 333 | mRNA | 0.53 | 3 | 71672459 | 71676171 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cmss1 | cmss1 | coding | downstream | 662740 | 70950681 ~ 71009719 (-) |
| tmem30c | LOC106586702 | coding | downstream | 721860 | 70945034 ~ 70950599 (-) |
| LOC118964322 | NA | coding | downstream | 764885 | 70896509 ~ 70907574 (-) |
| LOC110520512 | col8a1 | coding | downstream | 834968 | 70810604 ~ 70837491 (-) |
| jagn1a | LOC106586704 | coding | downstream | 862410 | 70807349 ~ 70810049 (-) |
| LOC110520517 | LOC106586722 | coding | upstream | 32311 | 71708482 ~ 71716359 (-) |
| LOC110504652 | LOC106586714 | coding | upstream | 78108 | 71754279 ~ 71764744 (-) |
| rnaseh2b | rnaseh2b | coding | upstream | 97859 | 71774030 ~ 71785013 (-) |
| trim13 | LOC106586719 | coding | upstream | 256250 | 71932421 ~ 71937033 (-) |
| LOC110505427 | LOC106586716 | coding | upstream | 301642 | 71977813 ~ 71979314 (-) |
| G293691 | NA | non-coding | downstream | 3122 | 71669109 ~ 71669337 (-) |
| G293685 | NA | non-coding | downstream | 12826 | 71659345 ~ 71659633 (-) |
| G293681 | NA | non-coding | downstream | 15626 | 71656423 ~ 71656833 (-) |
| G293680 | NA | non-coding | downstream | 17477 | 71654700 ~ 71654982 (-) |
| G293645 | NA | non-coding | downstream | 67220 | 71604583 ~ 71605239 (-) |
| G293725 | NA | non-coding | upstream | 55408 | 71731579 ~ 71731796 (-) |
| G293729 | NA | non-coding | upstream | 62108 | 71738279 ~ 71738586 (-) |
| G293731 | NA | non-coding | upstream | 63363 | 71739534 ~ 71740039 (-) |
| G293738 | NA | non-coding | upstream | 75219 | 71751390 ~ 71751794 (-) |
| G292919 | NA | other | downstream | 632307 | 71027619 ~ 71040152 (-) |
| G292753 | NA | other | downstream | 951868 | 70720036 ~ 70720591 (-) |
| G291977 | NA | other | downstream | 1564509 | 70107540 ~ 70107950 (-) |
| G291901 | LOC106586687 | other | downstream | 1675854 | 69980346 ~ 69996605 (-) |
| G291138 | NA | other | downstream | 2415915 | 69256005 ~ 69256544 (-) |
| G293984 | NA | other | upstream | 227143 | 71903314 ~ 71903908 (-) |
| LOC110504660 | LOC106582021 | other | upstream | 496878 | 72121974 ~ 72206818 (-) |
| G294451 | NA | other | upstream | 895078 | 72571249 ~ 72575432 (-) |
| G294697 | NA | other | upstream | 1099236 | 72775407 ~ 72776607 (-) |
| LOC110520539 | mfsd9 | other | upstream | 1200168 | 72870852 ~ 72881264 (-) |
