LOC110505427 (LOC106586716)


Basic Information

Item Value
gene id LOC110505427
gene name LOC106586716
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 71977813 ~ 71979314 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036964604.1
CAGCATATTGCACCTCCATCTCCCATTTCTGATTTTAGTAGCTCTGAAAATAAACTACCCACAATCAACTTCTCATCAACTAATTTAATTATTTAACTGCCACAGGTGTAACCCAGAGCCATGGTTACCATCCCCAGTGATTGAGATCCCAGTCAGCTGGGTTGATTAGTCCAATGGGAGCTAGCGCTGGCTTAGAAAGCTGCATGCAAACACATGAAAATAACTAGATGATATCTCACTTGGTTATGACTGTTCAGTGACATTCGGCTGTGCTGTAGGAGCCTCCATTTCAGCACAAAGGGTGTAATGGTAAGCAGCTGGATTACACACTCACAGACCAACACGATAAAGAGGAATCAGGACCTTGCTGATAACTGAAGATGTGATGATTCATTTCTAAGTCTTGATGTTTAACTGATCTGCTCCACTCATTGGACTATTAAAGGACAAGCTTAGATGGACTCCAACCATCACAGATCTGCAGAAACCTTCATCTTTCATAAAAACCTCAAAGTCCTGTCTGACATGGGTCTGGCCCTGTGCAGACAGTCTCACAGCCACATGGCCAAAGTGGTTCTAGTGGGCCTGGACGGGGCAGGGAAGTCCACCCTCCTCCACCGCCTTATTAGGGGCGAGCTGGCGCACACCACCCCCACCGTAGGCTTCAACGTGGGCTCGCTGGAGCTGGACTCTGGCCCGGAGCTGACCGTGTGGGACATAGGGGGCCAGGGGGGCATGCGTGCCCAGTGGGGAGACCACATGGAGGAATGCGATGCCCTGCTGTTTATGGTGGACGGGGTAGACCGGGTACGGATCGGGGAGGCAAGGGCGGCGTTGGGGAGAGTGCTGGGGGatgagagggtgaggggggtCCCCCTAATGGTGCTGGTTAATAAGATGGACCTCCCAGAGGCGATGGGGCTCCAGGAGGTGACGGgcgggctggggctggggcagtgCTGGGATAGAGACTGGGAGGTGCAGGGGTGCAGCGCTCACAACGGCCTGGGGCTCCAAGAGGCCCTGGACTCCTTGGCCACACTCATCAAAAAGCGCTGAGGGAGAACTCAGACACACAAGGATATATGGAACATTTTGGCAAATACACAGATCAATGGACAAGGAATGGGCTCTCATATACAAACAGGTAAAGAATAGGCACACACACATTTGGAGAAAAGGGAACCTGTGAGGCTTTTCATAAGCTAACTGTGCTCCTATCACTAACTAGCCCTGTCTCACAGTATGCATCATGCCAGTAGGCTATTTGAATATAGAAACAGTTGTGACATTCACTATGAAGGAAACTATTCAATGGGACTTGAGAATCGCAGATTGGAATTAAATGGCTACTTTTATCAAAAGGACAAAAACCCAATTAGATCATCCACCTGTTTTTACACTCACTGTAACAATGACATGTATTTTACATTAAACTAATC

Function

NR:

description
ADP-ribosylation factor-like protein 11

GO: NA

KEGG:

id description
K07959 ARL11; ADP-ribosylation factor-like protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036964604.1 True 1442 mRNA 0.49 2 71977813 71979314

Neighbor

gene id symbol gene type direction distance location
trim13 LOC106586719 coding downstream 40780 71932421 ~ 71937033 (-)
rnaseh2b rnaseh2b coding downstream 192800 71774030 ~ 71785013 (-)
LOC110504652 LOC106586714 coding downstream 213069 71754279 ~ 71764744 (-)
LOC110520517 LOC106586722 coding downstream 261454 71708482 ~ 71716359 (-)
LOC118964323 NA coding downstream 301642 71672459 ~ 71676171 (-)
LOC110520524 NA coding upstream 7006 71986320 ~ 71996884 (-)
LOC110520527 LOC106586729 coding upstream 18040 71997354 ~ 72005789 (-)
LOC110520523 LOC106582019 coding upstream 31381 72010695 ~ 72114513 (-)
LOC110504660 LOC106582021 coding upstream 142660 72121974 ~ 72206818 (-)
LOC110520529 LOC106586732 coding upstream 285064 72264378 ~ 72266650 (-)
G294015 NA non-coding downstream 32370 71945190 ~ 71945443 (-)
G293990 NA non-coding downstream 33281 71926065 ~ 71944532 (-)
G294012 NA non-coding downstream 52523 71925077 ~ 71925290 (-)
G294011 NA non-coding downstream 53514 71924064 ~ 71924299 (-)
G294008 NA non-coding downstream 62646 71914933 ~ 71915167 (-)
G294042 NA non-coding upstream 487 71979801 ~ 71980106 (-)
G294045 NA non-coding upstream 37761 72017075 ~ 72018622 (-)
G293991 NA non-coding upstream 136183 72115497 ~ 72118615 (-)
G294093 NA non-coding upstream 179661 72158975 ~ 72159261 (-)
G294095 NA non-coding upstream 184997 72164311 ~ 72165605 (-)
G293984 NA other downstream 73905 71903314 ~ 71903908 (-)
G292919 NA other downstream 937661 71027619 ~ 71040152 (-)
G292753 NA other downstream 1257222 70720036 ~ 70720591 (-)
G291977 NA other downstream 1869863 70107540 ~ 70107950 (-)
G291901 LOC106586687 other downstream 1981208 69980346 ~ 69996605 (-)
G294451 NA other upstream 591935 72571249 ~ 72575432 (-)
G294697 NA other upstream 796093 72775407 ~ 72776607 (-)
LOC110520539 mfsd9 other upstream 897025 72870852 ~ 72881264 (-)
G296011 NA other upstream 1592978 73572292 ~ 73572911 (-)

Expression


Co-expression Network