fhl2a (fhl2)


Basic Information

Item Value
gene id fhl2a
gene name fhl2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73025288 ~ 73039384 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975111.1
attTAAGAAAGTGAGGGGGGACATTCTCAAGTTCTCCTGTTTTTCCTTTGCCTCCTTATATGGTCAAACCATGACGGTGGAATCAGTGGGCAAGAGGGGAGTAGGTCAGAActcagaaagaaagagagagagaagaatgagagCAAGAGGAAAGTGGTGAGaagtgtagaggagagaggtatgCAGCGTCGTGTGCATGGGACACTGGGGACTTCCAGAGGCAGCCGGCCACACAcgcgtacaaacacacacacacacacacacacaggtcagcagAGTGACAGGCCAAACACAGAGAGGGATAACCAGAGGTTTATCAGGGGCTGGACTGCTGGCAGCTGCAAAGCTTGGGATTCCCGGTGCAAAGATGACAGAGCGCTATGACTGCCACTACTGTAAGGAATCCCTGTTCGGGAAGAAATACGTCCTGAGAGAGGAAAACCCATACTGTGTCAAATGCTACGAGAGCCTGTACTCAAACACCTGTGAGGACTGCAAGAAACCCATCGGCTGCAACACCAggGACCTTTCCTACAAGGACCGCCACTGGCACGAGGAGTGTTTCCAGTGCTTCCAGTGTAAACGCTCTCTGGTGGACAAGCCCTTCTCCACCAAGGATGACCAGCTGCTCTGCACTGAGTGCTACTCCAATGAGTACTCCTCCAAGTGCCACGAGTGCAAGAAGACCATCATGCCTGGCTCCAGGAAGATGGAGCATAAGGGTAACAGCTGGCATGAGACCTGCTTCACCTGCCAGCGTTGCCAGCAGCCCATCGGCACCAAGAGCTTCATCCCCAAGGAGAACCACAACTTCTGTGTGCCCTGCTACGAGAAACAGTTTGCCATGCAGTGTGTGCACTGCAAGAAGCCCATCACTACTGGCGGGGTGACCTATCGCGACCAACCCTGGCATAAGGACTGCTTCCTGTGCACCGGCTGCAAGCAGCAGCTGTCTGGCCAACGCTTCACCTCCCGTGACGACTTTGCCTACTGCCTCAACTGTTTCTGCAACCTGTATGCCAAGAAGTGTGCTTCCTGCACCACCCCCATCAGTGGTCTGGGTGGCAGTAAGTACATCTCGTTTGAAGAGCGCCAGTGGCACAACGACTGCTTCAACTGTAAGAAGTGCTCTGTCTCCCTGGTGGGCCGGGGTTTCCTCACCGAGCGTGACGACATCCTGTGCCCCGAGTGTGGCAAAGACATCTGACATCTGGCAGGCAGCGAGTGGCCGACACGTCTGATTGGAAATTAACGAAACAACCAGGAAGTAACAACGACCTATCAGAGCAC
>XM_036975112.1
CACTCGCTCCACAATTAGTTGTCTATGGGTGGGGTAATCCAATCAGGAGTGACTACAGCTCGCCCTCTGTTCACCGGTCTCAGTCTGAGCAGactcctcacagacacacaccctccaCAGACAGAAAGTTGGGATTCCCGGTGCAAAGATGACAGAGCGCTATGACTGCCACTACTGTAAGGAATCCCTGTTCGGGAAGAAATACGTCCTGAGAGAGGAAAACCCATACTGTGTCAAATGCTACGAGAGCCTGTACTCAAACACCTGTGAGGACTGCAAGAAACCCATCGGCTGCAACACCAggGACCTTTCCTACAAGGACCGCCACTGGCACGAGGAGTGTTTCCAGTGCTTCCAGTGTAAACGCTCTCTGGTGGACAAGCCCTTCTCCACCAAGGATGACCAGCTGCTCTGCACTGAGTGCTACTCCAATGAGTACTCCTCCAAGTGCCACGAGTGCAAGAAGACCATCATGCCTGGCTCCAGGAAGATGGAGCATAAGGGTAACAGCTGGCATGAGACCTGCTTCACCTGCCAGCGTTGCCAGCAGCCCATCGGCACCAAGAGCTTCATCCCCAAGGAGAACCACAACTTCTGTGTGCCCTGCTACGAGAAACAGTTTGCCATGCAGTGTGTGCACTGCAAGAAGCCCATCACTACTGGCGGGGTGACCTATCGCGACCAACCCTGGCATAAGGACTGCTTCCTGTGCACCGGCTGCAAGCAGCAGCTGTCTGGCCAACGCTTCACCTCCCGTGACGACTTTGCCTACTGCCTCAACTGTTTCTGCAACCTGTATGCCAAGAAGTGTGCTTCCTGCACCACCCCCATCAGTGGTCTGGGTGGCAGTAAGTACATCTCGTTTGAAGAGCGCCAGTGGCACAACGACTGCTTCAACTGTAAGAAGTGCTCTGTCTCCCTGGTGGGCCGGGGTTTCCTCACCGAGCGTGACGACATCCTGTGCCCCGAGTGTGGCAAAGACATCTGACATCTGGCAGGCAGCGAGTGGCCGACACGTCTGATTGGAAATTAACGAAACAACCAGGAAGTAACAACGACCTATCAGAGCAC

Function

symbol description
fhl2 Enables identical protein binding activity. Involved in several processes, including negative regulation of apoptotic process; negative regulation of calcineurin-NFAT signaling cascade; and negative regulation of transcription by RNA polymerase II. Located in focal adhesion.

NR:

description
PREDICTED: four and a half LIM domains protein 2

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K14380 FHL2; four and a half LIM domains protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975111.1 False 1290 mRNA 0.54 6 73025288 73034616
XM_036975112.1 True 1071 mRNA 0.55 6 73025288 73039384

Neighbor

gene id symbol gene type direction distance location
LOC110520539 mfsd9 coding downstream 144024 72870852 ~ 72881264 (-)
LOC110504714 LOC106586779 coding downstream 186835 72791304 ~ 72838453 (-)
LOC110504707 NA coding downstream 242414 72776716 ~ 72782874 (-)
LOC110520531 LOC106582025 coding downstream 483160 72490848 ~ 72542128 (-)
LOC110520529 LOC106586732 coding downstream 758638 72264378 ~ 72266650 (-)
uxs1 uxs1 coding upstream 123132 73162516 ~ 73266610 (-)
st6gal2a st6gal2 coding upstream 298786 73338170 ~ 73505121 (-)
LOC110505436 LOC106581976 coding upstream 507815 73547199 ~ 73561315 (-)
grk1a grk1 coding upstream 552400 73591784 ~ 73597306 (-)
LOC110520555 LOC106586764 coding upstream 558058 73597442 ~ 73614530 (-)
G295738 NA non-coding downstream 51483 72948008 ~ 72973805 (-)
G295753 NA non-coding downstream 59518 72964648 ~ 72965770 (-)
G295750 NA non-coding downstream 62614 72962307 ~ 72962674 (-)
G294763 NA non-coding downstream 132017 72893018 ~ 72893271 (-)
G294762 NA non-coding downstream 132751 72892337 ~ 72892537 (-)
G295785 NA non-coding upstream 7230 73046614 ~ 73049200 (-)
G295797 nck2 non-coding upstream 29364 73068748 ~ 73099306 (-)
G295823 NA non-coding upstream 81281 73120665 ~ 73123169 (-)
G295832 NA non-coding upstream 94090 73133474 ~ 73139783 (-)
G295865 NA non-coding upstream 177559 73216943 ~ 73217812 (-)
G294697 NA other downstream 248681 72775407 ~ 72776607 (-)
G294451 NA other downstream 449856 72571249 ~ 72575432 (-)
LOC110504660 LOC106582021 other downstream 818490 72121974 ~ 72206818 (-)
G293984 NA other downstream 1121380 71903314 ~ 71903908 (-)
G296011 NA other upstream 532908 73572292 ~ 73572911 (-)
G296043 NA other upstream 592654 73632038 ~ 73633036 (-)
G296102 LOC106586753 other upstream 733770 73773154 ~ 73775299 (-)
G296100 LOC106586751 other upstream 769098 73808482 ~ 73809596 (-)
LOC110520572 cep97 other upstream 833589 73870489 ~ 73877576 (-)

Expression


Co-expression Network