uxs1 (uxs1)


Basic Information

Item Value
gene id uxs1
gene name uxs1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73162516 ~ 73266610 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975115.1
AAGATATGTATGTACGCAAATAAATGCAAAAAATGCCACGTCTTCACTTACAAAATCAGATGTTGAATATGTGCTATCGCGGCAGGCTGCTCAATCAAGGTCAGGAATACTCGATCACCCTGGACAGCTATCGGCCAAGTAGGGGCATAAACTCTGAATTTCGCACAATTTTATCCGGATAAGTTAAACATTAGGAAGATATTATATTTCTTCCTAACTTGTTTTGATTATAAGGTTATTATGTTTTAGAAAACTATGCGGAAGTAATGGTAATGAAAGATAGCAGGTCTCGCTCATCAAGAAATTGCTAATGTTGTGTGTGACCAggcagatagctagctagctaatattcaGTGGTTGTACAGAAATCTACTGTGTGTATTAAGTACATTTTGAATTTAAAGCTGGCGAGGGTTTGCGGCACTGATAATGAAAGTCGTACTACGACCCAGAGAGTAGAATAGCCACAAGTGGCAGTGAGTTTAACGTAGCATactaagctaactagctaacaattAGCTGTGCTTTTACAGGACAGGAGGTAGCCACGTATGAACCTCTGTCCAGTCGTAGGTGCCTAATTCCTGCTTGTAATATACTAGCTAAAAAGCGTTCCTTTAGCAGGATATATATTAGATTTTCAAAACAAGTCTTAATCTAGAAGGAGCGCGCGTTTTGGTCCATAGTTCTGAAATGTTATAAACCGGAGCCTCGCGTGCTTCCGGGTTCGATGTTGCATTGAGCAGATGATGAAGCGGATCATCTGGGTGATCTCAGGACTAAACAGAAGGATGATGAAGCTACTGGTCGCCCTCGCTTTGATCGCCTACATTGCCTCTGTCTGGGGAACCTACACCAATATGAGATCCATACAGGAACATGGAGAGATGAAGATTGAGGAAAGAATTGACGAGgCAGTTGCTCCCCTCAGAGAGAAGATCCGGGATCTGGAGCTGAGTTTCTCTCAGAAATACCCCCCTGTGAAGTTCCTCTCGGAGAAGGATCGGAAAAGGATTTTGATAACGGGCGGCGCAGGCTTTGTTGGCTCCCATCTGACTGATAAGCTGATGATGGACGGCCATGAGGTGACGGTGGTGGACAACTTCTTCACTGGCCGCAAGAGGAACGTGGAGCACTGGATCGGCCACGAGAACTTTGAGCTCATCAACCACGACGTGGTGGAGCCGCTCTACATCGAGGTGGACCAGATCTATCACCTggcctctcctgcctctcctcccaaCTACATGTACAATCCCATCAAGACCCTGAAGACTAACACTATAGGAACCCTCAACATGCTGGgGTTGGCGAAGCGTGTTGGAGCTCGTCTGCTGCTGGCGTCTACGTCTGAGGTGTAcggagACCCAGAAGTGCACCCCCAGAATGAGGAGTATTGGGGTCATGTGAACCCCATCGGCCCCCGGGCCTGCTACGACGAGGGCAAACGCGTCGCTGAGACCATGTGCTACGCCTACATGAAGCAGGAAGGAGTGGAGGTGAGGGTGGCACGCATCTTTAACACCTTTGGGTCCCGGATGCACATGAACGACGGCCGTGTGGTCAGCAACTTCATACTGCAGGCTCTACAGGGAGAGCCCCTCACCGTGTATGGTAGTGGATCCCAGACGAGGGCCTTCCAGTATGTGAGtgatctAGTGAATGGTCTGGTGTCGTTGATGAACAGTAACATTAGCAGCCCAGTCAACCTGGGGAACCCGGAAGAACACACCATATTGGAGTTTGCTGAGCTCATCAGGAGTCTGGTCGTGAGCCGCAGTCAGATCCAATTCCTTCCAGAGGCGCAGGACGACCCTCGGAGACGCCGCCCCGACATTCGCAAAGCCAAGATGATGCTGGGCTGGGAACCTGTGGTGCCGTTAGAGGAGGGCCTGAACAAGACCATCCAGTACTTCAGCCGGGAGCTGGAGCACCAGGCCAATAACCAGTACATCCCCAAGCCCAAGGCAGCCCGCCAGAAGAAAGGACGACCAAGACAACACAACTGAGCTCAAGGGGTCAAGGGTCACACCATCCCCAAAGGCTGCTGGGACACCGGAGGACCCAGGACCCTCAGAGAACTCTCTTGAGTTTGGAGCGAAGAAGAAATGTTCCTGTGTCTGCTGTGGTTTTTACACTCCCGCGGGGCGATGCTTTTCAGACACAAACGTGCCTGAAAGCAAGAATAGAATCACAAACGGATAATTAAAAAAACTGACAATGATCAGAACCCAGTCTTGCACTCTGGGTTTTTTTGTCAATACAGGCTGTTATTTAAGATCAGGCTTGAGAGAAGTGTTTTGTTGCGTTGTTTACACTGTGCAGTTTGTCATTTGTTTTGCTCGGTTGACGTGGTCTATTTTATTACCTGCATTGATTCCTGGCTCTTACGTAAGACTGCTTTGTATTCCAACCATTGCAACATTGGCGGAGAGGAGAAGCGAGGAGAGGAGAAGCGAGGAGGGGTGAAGGAGAGTGAGTTGGTTTGTTCAAAGCCTCAGATGGGTGTGCTAGGCCCTGCCCCCTTCTACACTTGCTCTGGTGCTGTGCAGTGAGCTGTAAGCCTGGACACACACGCGCCACTCAagagtgtgtttctgtgtcactgtgtgtgtgtcttgtgtaaCTTTTGGGATAACCTTTGTGAAAGCTCTACTGTCAAATCGGAAATCCAGAAATCTTATATAATCAATTTTAGGTGAAAATGgtattttaataaaatatttccaataaatgtc

Function

symbol description
uxs1 Predicted to enable NAD+ binding activity and UDP-glucuronate decarboxylase activity. Acts upstream of or within several processes, including cartilage development; extracellular matrix organization; and proteoglycan biosynthetic process. Predicted to be located in Golgi cisterna membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm. Is expressed in several structures, including cartilage element; head; mesenchyme; perichondrium; and yolk syncytial layer. Orthologous to human UXS1 (UDP-glucuronate decarboxylase 1).

NR:

description
UDP-glucuronic acid decarboxylase 1

GO: NA

KEGG:

id description
K08678 UXS1, uxs; UDP-glucuronate decarboxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975115.1 True 2738 mRNA 0.48 15 73162516 73266610

Neighbor

gene id symbol gene type direction distance location
fhl2a fhl2 coding downstream 123132 73025288 ~ 73039384 (-)
LOC110520539 mfsd9 coding downstream 281252 72870852 ~ 72881264 (-)
LOC110504714 LOC106586779 coding downstream 324063 72791304 ~ 72838453 (-)
LOC110504707 NA coding downstream 379642 72776716 ~ 72782874 (-)
LOC110520531 LOC106582025 coding downstream 620388 72490848 ~ 72542128 (-)
st6gal2a st6gal2 coding upstream 71560 73338170 ~ 73505121 (-)
LOC110505436 LOC106581976 coding upstream 280589 73547199 ~ 73561315 (-)
grk1a grk1 coding upstream 325174 73591784 ~ 73597306 (-)
LOC110520555 LOC106586764 coding upstream 330832 73597442 ~ 73614530 (-)
LOC110520557 LOC106586760 coding upstream 375910 73642520 ~ 73651632 (-)
G295832 NA non-coding downstream 22733 73133474 ~ 73139783 (-)
G295823 NA non-coding downstream 39347 73120665 ~ 73123169 (-)
G295797 nck2 non-coding downstream 63210 73068748 ~ 73099306 (-)
G295785 NA non-coding downstream 113316 73046614 ~ 73049200 (-)
G295738 NA non-coding downstream 188711 72948008 ~ 72973805 (-)
G295979 NA non-coding upstream 210244 73476854 ~ 73478556 (-)
G296010 NA non-coding upstream 304641 73571251 ~ 73571774 (-)
G296012 NA non-coding upstream 307040 73573650 ~ 73573923 (-)
G296039 NA non-coding upstream 361429 73628039 ~ 73628383 (-)
G296042 NA non-coding upstream 365049 73631659 ~ 73631961 (-)
G294697 NA other downstream 385909 72775407 ~ 72776607 (-)
G294451 NA other downstream 587084 72571249 ~ 72575432 (-)
LOC110504660 LOC106582021 other downstream 955718 72121974 ~ 72206818 (-)
G293984 NA other downstream 1258608 71903314 ~ 71903908 (-)
G296011 NA other upstream 305682 73572292 ~ 73572911 (-)
G296043 NA other upstream 365428 73632038 ~ 73633036 (-)
G296102 LOC106586753 other upstream 506544 73773154 ~ 73775299 (-)
G296100 LOC106586751 other upstream 541872 73808482 ~ 73809596 (-)
LOC110520572 cep97 other upstream 606363 73870489 ~ 73877576 (-)

Expression


Co-expression Network