Item | Value |
---|---|
gene id | LOC110520569 |
gene name | LOC106586750 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 73817483 ~ 73845136 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
NADP-dependent malic enzyme-like isoform X1 |
id | name | namespace |
---|---|---|
GO:0006108 | malate metabolic process | biological_process |
GO:0055114 | oxidation-reduction process | biological_process |
GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | molecular_function |
GO:0046872 | metal ion binding | molecular_function |
GO:0051287 | NAD binding | molecular_function |
id | description |
---|---|
K00029 | E1.1.1.40, maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036975160.1 | False | 3991 | mRNA | 0.48 | 16 | 73817483 | 73845136 |
XM_036975161.1 | False | 3967 | mRNA | 0.48 | 16 | 73817483 | 73845136 |
XM_036975164.1 | False | 4055 | mRNA | 0.48 | 16 | 73817484 | 73845136 |
XM_036975165.1 | False | 4031 | mRNA | 0.48 | 16 | 73817484 | 73845136 |
XM_036975162.1 | False | 3910 | mRNA | 0.48 | 15 | 73817485 | 73845136 |
XM_036975163.1 | True | 3886 | mRNA | 0.48 | 15 | 73817485 | 73845136 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
ildr1b | LOC106586751 | coding | upstream | 7027 | 73804606 ~ 73810456 (+) |
LOC110520566 | LOC106586752 | coding | upstream | 14583 | 73775423 ~ 73802900 (+) |
LOC110520565 | LOC106586753 | coding | upstream | 43042 | 73762481 ~ 73774441 (+) |
mapk7 | mapk7 | coding | upstream | 84772 | 73720052 ~ 73732711 (+) |
LOC110520561 | NA | coding | upstream | 101299 | 73695537 ~ 73716196 (+) |
LOC118964327 | NA | coding | downstream | 3841 | 73848977 ~ 73851394 (+) |
LOC110520573 | LOC106581959 | coding | downstream | 32534 | 73877670 ~ 73880452 (+) |
LOC118964370 | NA | coding | downstream | 33362 | 73878498 ~ 73878677 (+) |
LOC110520574 | LOC106586745 | coding | downstream | 44630 | 73889766 ~ 73948013 (+) |
LOC118964354 | NA | coding | downstream | 132657 | 73977793 ~ 73977956 (+) |
G295143 | NA | non-coding | upstream | 62808 | 73721557 ~ 73754675 (+) |
G295112 | LOC106586754 | non-coding | upstream | 74816 | 73739747 ~ 73742667 (+) |
G295142 | NA | non-coding | upstream | 95978 | 73721164 ~ 73721505 (+) |
G295113 | NA | non-coding | upstream | 99855 | 73716449 ~ 73717628 (+) |
G295215 | LOC106586749 | non-coding | downstream | 13097 | 73858233 ~ 73858984 (+) |
G295221 | cep97 | non-coding | downstream | 25384 | 73870520 ~ 73871787 (+) |
G295223 | NA | non-coding | downstream | 28858 | 73873994 ~ 73874223 (+) |
G295224 | NA | non-coding | downstream | 29310 | 73874446 ~ 73874674 (+) |
G295225 | NA | non-coding | downstream | 30350 | 73875486 ~ 73876523 (+) |
ecrg4a | cssa25h2orf40 | other | upstream | 655080 | 73148293 ~ 73162405 (+) |
LOC110520546 | LOC106586770 | other | upstream | 676858 | 73133510 ~ 73140625 (+) |
c3h2orf49 | cssa25h2orf49 | other | upstream | 794541 | 73018800 ~ 73022950 (+) |
G294772 | NA | other | upstream | 917849 | 72899268 ~ 72899634 (+) |
G294162 | NA | other | upstream | 1524900 | 72290348 ~ 72292583 (+) |
G295230 | NA | other | downstream | 108110 | 73953246 ~ 73957789 (+) |
G295359 | NA | other | downstream | 333307 | 74178443 ~ 74179342 (+) |
G295421 | NA | other | downstream | 456966 | 74302102 ~ 74302604 (+) |
G295541 | NA | other | downstream | 648168 | 74493304 ~ 74496718 (+) |
G295558 | NA | other | downstream | 669007 | 74514143 ~ 74533086 (+) |