LOC110520572 (cep97)


Basic Information

Item Value
gene id LOC110520572
gene name cep97
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73870489 ~ 73877576 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597959.2
TTTTTCCCGTTTCATATTGGGATTGCTACCAAGTGTAAATCTATTGAGATCTCTTTCCCACCTGATTATCAACAGCGCCCTGCACTGCAGTAAAGCTTATTGTAGTTTTTTTAACCCAAGCATAGTGGTCCTTTAATGACAAACGGACATTTTTGAACTACATATTCCAATCAATTCTAAGCGTTCTTTCTGTTGTTTGCGCCGGAGGTCTCTAACTAGACAGTTGTGCTTTGGCAAGCACGCTAGCGTAGCGAGTTTGGTGCAGCCTCGTATATTCTGCGCGAAATGGGAGTATCAGATTTGACTTTTGACACAACTGGTCCAGTGGTGGACCTGTCAGCGCAGGGTCTGCAGAAACTGGAGCCCAGTTTCACCTGCtctgatgaaacacacacactcattctggACAGGAACCACATCATGAAATTGGACAATCTGGAGAGGAGCCGAGGCCTCCAACAGCTGTCAGTTGCTGGTAACCGCCTGGTGCGGATGATGGGTGTGTGTCGTCTAACCGAGCTGAGAGTTCTGAACCTGCCCAATAACAGTATTGGCTATATTGAAGGGCTGAGAGACCTTCCACACCTGGAGTGGCTCAACCTGTCAGGCAACAATATCAAGGTCATTGAGCAGCTCAACGGCTGTGTGGCTCTCCAACACTTGGACGTGTCTTACAACAACATCTCCAACATTGGTGATCTTACCAAGCTGTTAGCCTTAAAGACCCTTCTCCTTCATGGTAACAGCATTACGACGCTACGGACTGTCCCCACTCATTTGCCCGCCCATCTGTCCATCCTCTCCCTGGCAGAGAATGAGATCAGAGACCTCAACGAGgtctcctacctggcaccCCTCCATGACCTGGAACAGCTCTCCATTATGAGTAACCCCTGCATCATGGCAACCCCCTCGTTGCCTGGATACGACAATCGGCCGTACATCATGAGCTGGTGCCTGAACCTGAAGATCCTGGACGGATACTTGGTGTCACAGAAAGAAGGGTTGAAGGCGGAGTGGCTGTACAGCCAGGGCAAAGGTCGCTCGTACCGGCCAGGTCAGCACGTGCAACTGGTCCAGTACCTTGCCACCGTGTGCCCTTTGACCTCCACGTCAACCCTGGAGACGGCCGAGGATGCCAAGCTGGAGAAGATCCTCAGCAAGCAGAGGTTCCACCAGAGGCAGCTCCAGCAGCAAACCCAAGGGGGTTCCCCCAGCCCTCCCCGCCCCACCCAGCTGGATGTGGAGACTCACAGCCCCTGTCATGTGCCTCCACTAGGGGGAgccagagaggcagacagagccaCGCCTGTGACTGCCccaccagccagacagacagaGCCAGCGATCCTGCAGATAAACACCTGGCTGGGCTGCGAAGCCTCCCAGGCAGGCGCACCTCCTCTCCGTGGCCCCAGGGGTATGGAGGACAGCCTCTACCTGGAGGACGTTCAGAGCCAGACGGACAAAGATAAACTCACCGGTAGTCTGCTCTCCTCTGAGTCCACCTTTCTACCTGTCACCTCTGACCCCGCCCACTCTGACAGCGAGGACGAAACTGAGACATTTGAGCCTGACTCGCTGGCGCCTGAACACCCCATCCGTCCCAAAAAGACCTCTCCTGAAAAGACCCAACACGCACCCTTGGAAAGGGAGATGGAAATGGAGAGCGAGGTGGATAATAGAGTGAAGGAGGTAAAAGGAGAAAGGGTGTCGGCTGACAGCCACCTCACCTGTACCTCAACCGTCAGTCCACCTGTGACGGCAGGTGACCAATCACAGACCAATGACAGCGATCCGCTCCAGGGAGCATACTCAAACTGCGTTGCTGCAGAGGTGAGGGTGGGACCTAAGCAGGAAGAGGAAGCGGTGGTGAGATGTGATAGGCTGGGCCGCTGTGAGGCAGACAAGGCAGCCGTCAGGATCCAGGCATGGTGGAGGGGAATGTGGGCTCGGCGTAACCACCCTCTGGCCAAAGAGGTCCGGTGTGAGATCCGCCTGCGCAGGATGCAGGAGCACATAATATTCCTGTCTGGAGAGTTGGAGAGGGTGCGCCAGCACCACGAAGAGGAGCGGTTACAGAGACTGGTACAGGAGGAGGCTGTGAACTTTCTATGGAGTCAGCTTCAGTCCATGCAGCAGTGGCAGCGTACTGTGGAGGGGCAGCTGGCCAGTGTGGCTCAGGCTGGGTCATCTCCTGCTCCAGCCCTGACCCCCGGGCTCCCTCCAGCTCTTCGGCTCCCCCTGCCTGTGGCCTTCAGCACTGCAGACCCGGCTTGCACAGACCTCTCCTTCCCGGACTCAGGCTTCCAGTTTACAGGTAAACAGCAGGCGGGGCAGGAAGACACCTTCCTGAGCTGTGGGACGGGCGACTCTCTGGAGACTGTGCGGGCGCTGGTCTTGGGGGGGTCCGTGGCTCCTGGCGTTGGGGGGGACAGTCAGGACTGCAGTCTGCTGGAGCAGTACCTGTCCTCTGTGCAACAGAGAGAGGCGGAGGAGGGGGGTGCCAGCGACAGAACAGGCACACCACagcccccctcacccctctcactGGCCGAAATGGAACAGCCTGACTCCAACACACAGAACACCGCCCAGAGTGAagacacagagcagcaacacacacTGGGAGGTCCAATCTGATGTGCCTGTCCCTCTCCTGGACTTTTCTCCTGGTCTTCTAGGATTAGCTAAGAGACTGCCCATAAACTCAGTCCACCTGTGCTGATGAATGTTATTGATGGCTCTAACAGCGCCTCTAAGAATTTACTGACTCACATCCATATAACGAGTGGTATATGGACTCAAGGATGTGGATGATATGTTTGTATAGCCCGGATGATTTTTCTCCCTTTAATTCTCTTGGACAATGCTACAGTATTCATTGTCATGATCTGTCAGTCCGTTTGGCTAATGCTTCCTTCACTTACGTTGGGGAGACGCGGGAACTGCCGTTCCAACTCCCGGCACCCCTGGTTTTTCCCCACGCGGCCGACACGCAATCTTATATTGCTGCGATTTAATGGTCATCCGCGGCGTGTCCCGATGTTAAGGGTTGCACGGCGGAAGACCAGATTCTCCAAGAGTATCAGATAGAACTACAATTCACATATATAAGTGCCGCTACTTGGTCGTCCCAAATCTCCTCAATGTCAATCTACCTTTAAGTAGAAACCGATTGGCTACAGTTCAGGCTAGACAGCTCGGCTCTAAATTTAATTCCAATTTCTTCTGTATTTAAATGCCTCAATCTATACTTGTATTCCTGCAGGTGAGTGAGAGGACCAGGTCTGGACTAGATGATTTGGCGTGAATGTAAATATCACAGCGTGCTGAGAAGGTAGTTTAGTTGCTGAGAATGGTTAAATGCAAATTGTAAAAAAAGATTTGTAAAAATCTGGTGCTCTATGTTTACACAATAAAATGTTTTCTTTAA
>XM_021597958.2
TATtgtttataaaaaagtatttgaCCAATCAGCAACTAGATCGGTTGCTTGGTGTTGACACAAGCGGGAAGTATGGCGATGATAGAAAGGCAAGCCAAAGGACCCGATCAACAAATTGAACAAAATGAAGGTCCAGTGGTGGACCTGTCAGCGCAGGGTCTGCAGAAACTGGAGCCCAGTTTCACCTGCtctgatgaaacacacacactcattctggACAGGAACCACATCATGAAATTGGACAATCTGGAGAGGAGCCGAGGCCTCCAACAGCTGTCAGTTGCTGGTAACCGCCTGGTGCGGATGATGGGTGTGTGTCGTCTAACCGAGCTGAGAGTTCTGAACCTGCCCAATAACAGTATTGGCTATATTGAAGGGCTGAGAGACCTTCCACACCTGGAGTGGCTCAACCTGTCAGGCAACAATATCAAGGTCATTGAGCAGCTCAACGGCTGTGTGGCTCTCCAACACTTGGACGTGTCTTACAACAACATCTCCAACATTGGTGATCTTACCAAGCTGTTAGCCTTAAAGACCCTTCTCCTTCATGGTAACAGCATTACGACGCTACGGACTGTCCCCACTCATTTGCCCGCCCATCTGTCCATCCTCTCCCTGGCAGAGAATGAGATCAGAGACCTCAACGAGgtctcctacctggcaccCCTCCATGACCTGGAACAGCTCTCCATTATGAGTAACCCCTGCATCATGGCAACCCCCTCGTTGCCTGGATACGACAATCGGCCGTACATCATGAGCTGGTGCCTGAACCTGAAGATCCTGGACGGATACTTGGTGTCACAGAAAGAAGGGTTGAAGGCGGAGTGGCTGTACAGCCAGGGCAAAGGTCGCTCGTACCGGCCAGGTCAGCACGTGCAACTGGTCCAGTACCTTGCCACCGTGTGCCCTTTGACCTCCACGTCAACCCTGGAGACGGCCGAGGATGCCAAGCTGGAGAAGATCCTCAGCAAGCAGAGGTTCCACCAGAGGCAGCTCCAGCAGCAAACCCAAGGGGGTTCCCCCAGCCCTCCCCGCCCCACCCAGCTGGATGTGGAGACTCACAGCCCCTGTCATGTGCCTCCACTAGGGGGAgccagagaggcagacagagccaCGCCTGTGACTGCCccaccagccagacagacagaGCCAGCGATCCTGCAGATAAACACCTGGCTGGGCTGCGAAGCCTCCCAGGCAGGCGCACCTCCTCTCCGTGGCCCCAGGGGTATGGAGGACAGCCTCTACCTGGAGGACGTTCAGAGCCAGACGGACAAAGATAAACTCACCGGTAGTCTGCTCTCCTCTGAGTCCACCTTTCTACCTGTCACCTCTGACCCCGCCCACTCTGACAGCGAGGACGAAACTGAGACATTTGAGCCTGACTCGCTGGCGCCTGAACACCCCATCCGTCCCAAAAAGACCTCTCCTGAAAAGACCCAACACGCACCCTTGGAAAGGGAGATGGAAATGGAGAGCGAGGTGGATAATAGAGTGAAGGAGGTAAAAGGAGAAAGGGTGTCGGCTGACAGCCACCTCACCTGTACCTCAACCGTCAGTCCACCTGTGACGGCAGGTGACCAATCACAGACCAATGACAGCGATCCGCTCCAGGGAGCATACTCAAACTGCGTTGCTGCAGAGGTGAGGGTGGGACCTAAGCAGGAAGAGGAAGCGGTGGTGAGATGTGATAGGCTGGGCCGCTGTGAGGCAGACAAGGCAGCCGTCAGGATCCAGGCATGGTGGAGGGGAATGTGGGCTCGGCGTAACCACCCTCTGGCCAAAGAGGTCCGGTGTGAGATCCGCCTGCGCAGGATGCAGGAGCACATAATATTCCTGTCTGGAGAGTTGGAGAGGGTGCGCCAGCACCACGAAGAGGAGCGGTTACAGAGACTGGTACAGGAGGAGGCTGTGAACTTTCTATGGAGTCAGCTTCAGTCCATGCAGCAGTGGCAGCGTACTGTGGAGGGGCAGCTGGCCAGTGTGGCTCAGGCTGGGTCATCTCCTGCTCCAGCCCTGACCCCCGGGCTCCCTCCAGCTCTTCGGCTCCCCCTGCCTGTGGCCTTCAGCACTGCAGACCCGGCTTGCACAGACCTCTCCTTCCCGGACTCAGGCTTCCAGTTTACAGGTAAACAGCAGGCGGGGCAGGAAGACACCTTCCTGAGCTGTGGGACGGGCGACTCTCTGGAGACTGTGCGGGCGCTGGTCTTGGGGGGGTCCGTGGCTCCTGGCGTTGGGGGGGACAGTCAGGACTGCAGTCTGCTGGAGCAGTACCTGTCCTCTGTGCAACAGAGAGAGGCGGAGGAGGGGGGTGCCAGCGACAGAACAGGCACACCACagcccccctcacccctctcactGGCCGAAATGGAACAGCCTGACTCCAACACACAGAACACCGCCCAGAGTGAagacacagagcagcaacacacacTGGGAGGTCCAATCTGATGTGCCTGTCCCTCTCCTGGACTTTTCTCCTGGTCTTCTAGGATTAGCTAAGAGACTGCCCATAAACTCAGTCCACCTGTGCTGATGAATGTTATTGATGGCTCTAACAGCGCCTCTAAGAATTTACTGACTCACATCCATATAACGAGTGGTATATGGACTCAAGGATGTGGATGATATGTTTGTATAGCCCGGATGATTTTTCTCCCTTTAATTCTCTTGGACAATGCTACAGTATTCATTGTCATGATCTGTCAGTCCGTTTGGCTAATGCTTCCTTCACTTACGTTGGGGAGACGCGGGAACTGCCGTTCCAACTCCCGGCACCCCTGGTTTTTCCCCACGCGGCCGACACGCAATCTTATATTGCTGCGATTTAATGGTCATCCGCGGCGTGTCCCGATGTTAAGGGTTGCACGGCGGAAGACCAGATTCTCCAAGAGTATCAGATAGAACTACAATTCACATATATAAGTGCCGCTACTTGGTCGTCCCAAATCTCCTCAATGTCAATCTACCTTTAAGTAGAAACCGATTGGCTACAGTTCAGGCTAGACAGCTCGGCTCTAAATTTAATTCCAATTTCTTCTGTATTTAAATGCCTCAATCTATACTTGTATTCCTGCAGGTGAGTGAGAGGACCAGGTCTGGACTAGATGATTTGGCGTGAATGTAAATATCACAGCGTGCTGAGAAGGTAGTTTAGTTGCTGAGAATGGTTAAATGCAAATTGTAAAAAAAGATTTGTAAAAATCTGGTGCTCTATGTTTACACAATAAAATGTTTTCTTTAA
>TU336009
TGCAGTCTGCTGGAGCAGTACCTGTCCTCTGTGCAACAGAGAGAGGCGGAGGAGGGGGGTGCCAGCGACAGAACAGGCACACCACagcccccctcacccctctcactGGCCGAAATGGAACAGCCTGACTCCAACACACAGAACACCGCCCAGAGTGAagacacagagcagcaacacacacTGGGAGGTCCAATCTGATGTGCCTGTCCCTCTCCTGGACTTTTCTCCTGGTCTTCTAGGATTAGCTAAGAGACTGCCCATAAACTCAGTCCACCTGTGCTGATGAATGTTATTGATGGCTCTAACAGCGCCTCTAAGAATTTACTGACTCACATCCATATAACGAGTGGTATATGGACTCAAGGATGTGGATGATATGTTTGTATAGCCCGGATGATTTTTCTCCCTTTAATTCTCTTGGACAATGCTACAGTATTCATTGTCATGATCTGTCAGTCCGTTTGGCTAATGCTTCCTTCACTTACGTTGGGGAGACGCGGGAACTGCCGTTCCAACTCCCGGCACCCCTGGTTTTTCCCCACGCGGCCGACACGCAATCTTATATTGCTGCGATTTAATGGTCATCCGCGGCGTGTCCCGATGTTAAGGGTTGCACGGCGGAAGACCAGATTCTCCAAGAGTATCAGATAGAACTACAATTCACATATATAAGTGCCGCTACTTGGTCGTCCCAAATCTCCTCAATGTCAATCTACCTTTAAGTAGAAACCGATTGGCTACAGTTCAGGCTAGACAGCTCGGCTCTAAATTTAATTCCAATTTCTTCTGTATTTAAATGCCTCAATCTATACTTGTATTCCTGCAGGTGAGTGAGAGGACCAGGTCTGGACTAGATGATTTGGCGTGAATGTAAATATCACAGCGTGCTGAGAAGGTAGTTTAGTTGCTGAGAATGGTTAAATGCAAATTGTAAAAAAAGATTTGTAAAAATCTGGTGCTCTATGTTTAC
>TU336010
TCAGAGCCAGACGGACAAAGATAAACTCACCGGTAGTCTGCTCTCCTCTGAGTCCACCTTTCTACCTGTCACCTCTGACCCCGCCCACTCTGACAGCGAGGACGAAACTGAGACATTTGAGCCTGACTCGCTGGCGCCTGAACACCCCATCCGTCCCAAAAAGACCTCTCCTGAAAAGACCCAACACGCACCCTTGGAAAGGGAGATGGAAATGGAGAGCGAGGTGGATAATAGAGTGAAGGAGGTAAAAGGAGAAAGGGTGTCGGCTGACAGCCACCTCACCTGTACCTCAACCGTCAGTCCACCTGTGACGGCAGGTGACCAATCACAGACCAATGACAGCGATCCGCTCCAGGGAGCATACTCAAACTGCGTTGCTGCAGAGGTGAGGGTGGGACCTAAGCAGGAAGAGGAAGCGGTGGTGAGATGTGATAGGCTGGGCCGCTGTGAGGCAGACAAGGCAGCCGTCAGGATCCAGGCATGGTGGAGGGGAATGTGGGCTCGGCGTAACCACCCTCTGGCCAAAGAGGTCCGGTGTGAGATCCGCCTGCGCAGGATGCAGGAGCACATAATATTCCTGTCTGGAGAGTTGGAGAGGTACGGAAGAGGCCCCAATCAATCCAAGGGCTGCTTTCTGATTCCCTGCCCTTCTCCAGAAgtgtgcacttgtgtgtgtgaAGAAGTGTGCATGCATTttaaagcattggattggttGCTTTATGGCTGGAGGGAGTTTCCACAATATTCCTCACACCAGTCCTTTCCTTTTAAATACATGAGGGGGAGTGTACGAGTGCACACTTCTCTTAGAAGGGTAGAGAATTGGTATGTAGACACGGACCACC

Function

symbol description
cep97 Orthologous to human CEP97 (centrosomal protein 97).

NR:

description
centrosomal protein of 97 kDa-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597959.2 False 3436 mRNA 0.53 11 73870489 73877384
XM_021597958.2 False 3247 mRNA 0.54 11 73870489 73877576
TU336009 False 970 lncRNA 0.47 1 73870510 73871479
TU336010 True 845 TUCP 0.54 1 73872973 73873817

Neighbor

gene id symbol gene type direction distance location
LOC110520571 LOC106586749 coding downstream 2114 73852084 ~ 73868375 (-)
zgc:92313 LOC106586754 coding downstream 110755 73739671 ~ 73759734 (-)
LOC110520558 LOC106586756 coding downstream 173127 73661996 ~ 73697362 (-)
LOC110520557 LOC106586760 coding downstream 218857 73642520 ~ 73651632 (-)
LOC110520555 LOC106586764 coding downstream 255959 73597442 ~ 73614530 (-)
LOC110520575 LOC106586746 coding upstream 5965 73883541 ~ 73889222 (-)
LOC110520576 NA coding upstream 82840 73960416 ~ 73973401 (-)
LOC118964355 NA coding upstream 95876 73973452 ~ 73973615 (-)
LOC118964353 NA coding upstream 96754 73974330 ~ 73974439 (-)
LOC118964361 NA coding upstream 99804 73977380 ~ 73977551 (-)
G296141 NA non-coding downstream 24511 73845287 ~ 73845978 (-)
G296129 NA non-coding downstream 45825 73824192 ~ 73824664 (-)
G296120 LOC106586750 non-coding downstream 52020 73817522 ~ 73818469 (-)
G296117 NA non-coding downstream 57359 73811954 ~ 73813130 (-)
G296101 NA non-coding downstream 60053 73770621 ~ 73810436 (-)
G296193 NA non-coding upstream 51285 73928861 ~ 73929759 (-)
G296144 NA non-coding upstream 70495 73948071 ~ 73949708 (-)
G296145 NA non-coding upstream 72349 73949925 ~ 73950171 (-)
G296152 NA non-coding upstream 72931 73950507 ~ 73952102 (-)
G296148 NA non-coding upstream 77328 73954904 ~ 73956047 (-)
G296100 LOC106586751 other downstream 60893 73808482 ~ 73809596 (-)
G296102 LOC106586753 other downstream 95190 73773154 ~ 73775299 (-)
G296043 NA other downstream 237453 73632038 ~ 73633036 (-)
G296011 NA other downstream 297578 73572292 ~ 73572911 (-)
LOC110520539 mfsd9 other downstream 989635 72870852 ~ 72881264 (-)
G296166 LOC106581959 other upstream 143 73877719 ~ 73880371 (-)
G296315 NA other upstream 361611 74239187 ~ 74239795 (-)
G298065 NA other upstream 2082971 75960547 ~ 75963074 (-)
G298131 NA other upstream 2177545 76055121 ~ 76057006 (-)
G296164 NA non-coding upstream 746 73872225 ~ 73872570 (-)
G296165 NA non-coding upstream 1255 73872734 ~ 73872956 (-)
LOC110520572 cep97 other upstream 1494 73870489 ~ 73877576 (-)

Expression


Co-expression Network