LOC110520575 (LOC106586746)


Basic Information

Item Value
gene id LOC110520575
gene name LOC106586746
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73883541 ~ 73889222 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021597963.2
CACACCAATAGGAATTAGGAGCGTCTTGTTGTGGTACTGTGCTAGATAGGTTGCGCTGTGAAGAAAAGTCACCACCTTGTAAAAGCTCTCAAATCAAGGCCACCGGGAATGAGCACTGTTAGCTACATGCCAATAGGTTTGCATTAGAAGGTCGAAAGTATTACAACGCTTTTGACATTTTTCCCGAACCGTTTTATGACTACATTGCTGCAAATATTAGATATAGGGCAATACCAATACTCAAGTCGAACTAATTTACCTTCGTAGCTACgtatttagcaagctagctagcttgctaggtcAGGTGTAGCTAACGTTAGACAGCAACATTAGCCTTTTGCAAACATGGCTGCGATGAGAGTTTCCTATCACAAACTGCTGGATAAGATCGGGCTAATGTTGCCAGCAAAACTGAGACCTCTCTACAATCACCCTGCAGGTCCAAAGACTATTTTCTTCTGGGCCCCGATGTTCAAATGGGGTCTGGTCGGGGCTGGTCTGGCAGATATGAGTCGACCAGCTGAGAAACTGAGCTTTTCCCAGTCTGCTGTACTGACAGCCACAGGTCTGACCTGGTCCAGATACTCTTTGGTCATCATTCCAAAGAACTGGAACCTCTTTGCTGTCAATTTATTTGTGGGTAGTGCTGGAATATCCCAGCTCTACAGGATCTTCCAGTATGAACAAGGGAAGAAGGCACTAGCAAAGGAGGAAGCTGCCCCAGCAGAGTCTTGAATTATGTCACCAGTCCATCTCCATGGACTGTAAGGGAGCTTATCACCGGCACAAACCCAGTCCCTCTAAGCCCCTCCATCCCTTTTCCATCCTCACTCGATtttacagtagaaaaaaaacaatgttttctTCACTGTAGATCATGTAATTTGCCTGGATTTCTTCAGGGTTATAATGGCATATTAACCCTTACCAAACACGCAAATGTTTGTCATCTACGCACAAGCTGTAGTATTTAAGTTTTACTTCATACAACAAATGGCATGACTGTTTTTAATTTGTTCATGATTAATGTTTAGCGTGCACGTTTTGGGAAGTGTTGCATTTTTTCCGTTATTTCTTTTGAGTAGTCGTCATTCCTCATGGAGTGGTTTCCAAACAAGGAAGGTCTTGGATCTGTGTTGATTGTGGTTAAAAAGAATGTCTCCCCaaattaaaaatgttttaaaaaaaatgtcactTTCATCCCATATGCTTATTCAACTATTTTCAGCAATTTTGGTAACTATGTCTATATCAGTAGGATGATTCAACCGTACATGCATACCATGTGACTGTTCCTTCCACGTGTAGTAAACACTTTAACAAATAaatcaggtaaaaaaaaaaacatttcatataGCTTTTAACTGTAGACTTTCAAATGCCAGTAGGAAATCACCTTTTTCCCCCTGATCATTAGGAGGAACCTTTTGGTAATGTGTCCTATGTGTTCCAGTATTGGGAGCTGAATCTAGCGTGGTACTTGGACCCAAGAAGGACAACATGTATTGGCCCTGTAGTCAAGGTCCTCGTCTCCTATTGGTTGGTTCTCAGTAGTTGGGAGACGCATAATCTGTTAGTGTAACTAGATGAGAATTTAAAAAGTAATTTTGTTCATTGATCTCTGAAATTTTATAGCAATAACTGGCTAAATACATTGGTCCACAATGCACTGAAACATGAACAGGCACTTATGTATGTCGAGGTTATATCTTTAGTgtctatgatatatatatatatgccctTATTTGTTCTGTTGAATTAAAAAATCTTGGCATA

Function

NR:

description
mitochondrial pyruvate carrier 2

GO:

id name namespace
GO:0006850 mitochondrial pyruvate transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component

KEGG:

id description
K22139 MPC2; mitochondrial pyruvate carrier 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021597963.2 True 1776 mRNA 0.40 5 73883541 73889222

Neighbor

gene id symbol gene type direction distance location
LOC110520572 cep97 coding downstream 5965 73870489 ~ 73877576 (-)
LOC110520571 LOC106586749 coding downstream 15166 73852084 ~ 73868375 (-)
zgc:92313 LOC106586754 coding downstream 123807 73739671 ~ 73759734 (-)
LOC110520558 LOC106586756 coding downstream 186179 73661996 ~ 73697362 (-)
LOC110520557 LOC106586760 coding downstream 231909 73642520 ~ 73651632 (-)
LOC110520576 NA coding upstream 71194 73960416 ~ 73973401 (-)
LOC118964355 NA coding upstream 84230 73973452 ~ 73973615 (-)
LOC118964353 NA coding upstream 85108 73974330 ~ 73974439 (-)
LOC118964361 NA coding upstream 88158 73977380 ~ 73977551 (-)
LOC110520577 LOC106586797 coding upstream 96679 73985901 ~ 74028822 (-)
G296165 NA non-coding downstream 10585 73872734 ~ 73872956 (-)
G296164 NA non-coding downstream 10971 73872225 ~ 73872570 (-)
G296141 NA non-coding downstream 37563 73845287 ~ 73845978 (-)
G296129 NA non-coding downstream 58877 73824192 ~ 73824664 (-)
G296193 NA non-coding upstream 39639 73928861 ~ 73929759 (-)
G296144 NA non-coding upstream 58849 73948071 ~ 73949708 (-)
G296145 NA non-coding upstream 60703 73949925 ~ 73950171 (-)
G296152 NA non-coding upstream 61285 73950507 ~ 73952102 (-)
G296148 NA non-coding upstream 65682 73954904 ~ 73956047 (-)
G296166 LOC106581959 other downstream 3170 73877719 ~ 73880371 (-)
G296100 LOC106586751 other downstream 73945 73808482 ~ 73809596 (-)
G296102 LOC106586753 other downstream 108242 73773154 ~ 73775299 (-)
G296043 NA other downstream 250505 73632038 ~ 73633036 (-)
G296315 NA other upstream 349965 74239187 ~ 74239795 (-)
G298065 NA other upstream 2071325 75960547 ~ 75963074 (-)
G298131 NA other upstream 2165899 76055121 ~ 76057006 (-)
G298192 NA other upstream 2276781 76166003 ~ 76166401 (-)

Expression


Co-expression Network