Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110520578 |
| gene name | LOC106586794 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 74118329 ~ 74145750 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: ATP-dependent RNA helicase DDX3X-like isoform X4 |
| id | description |
|---|---|
| K11594 | DDX3X, bel; ATP-dependent RNA helicase DDX3X |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036975178.1 | False | 5250 | mRNA | 0.48 | 20 | 74118329 | 74145750 |
| XM_021597970.2 | False | 5465 | mRNA | 0.47 | 19 | 74118333 | 74145750 |
| XM_036975179.1 | True | 5417 | mRNA | 0.47 | 18 | 74118333 | 74145750 |
74,116,000
74,120,000
74,124,000
74,128,000
74,132,000
74,136,000
74,140,000
74,144,000
74,148,000
74,152,000
74,156,000
74,160,000
74,164,000
74,168,000
74,172,000
NC_048567.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504735 | LOC106586795 | coding | upstream | 14319 | 74031194 ~ 74104010 (+) |
| LOC118964354 | NA | coding | upstream | 140373 | 73977793 ~ 73977956 (+) |
| LOC110520574 | LOC106586745 | coding | upstream | 170316 | 73889766 ~ 73948013 (+) |
| LOC110520573 | LOC106581959 | coding | upstream | 237877 | 73877670 ~ 73880452 (+) |
| LOC118964370 | NA | coding | upstream | 239652 | 73878498 ~ 73878677 (+) |
| nyx | nyx | coding | downstream | 3675 | 74149425 ~ 74161940 (+) |
| LOC110520581 | NA | coding | downstream | 126700 | 74272450 ~ 74274991 (+) |
| LOC110520580 | LOC106586789 | coding | downstream | 136391 | 74282141 ~ 74299579 (+) |
| LOC110520586 | NA | coding | downstream | 525533 | 74671283 ~ 74675668 (+) |
| LOC110504760 | LOC106586785 | coding | downstream | 537252 | 74683002 ~ 74778935 (+) |
| G295334 | NA | non-coding | upstream | 4368 | 74111331 ~ 74113961 (+) |
| G295312 | NA | non-coding | upstream | 10058 | 74104485 ~ 74108271 (+) |
| G295271 | NA | non-coding | upstream | 135602 | 73982402 ~ 73982727 (+) |
| G295265 | NA | non-coding | upstream | 143348 | 73972087 ~ 73974981 (+) |
| G295264 | NA | non-coding | upstream | 149206 | 73968884 ~ 73969123 (+) |
| G295351 | NA | non-coding | downstream | 21505 | 74167255 ~ 74167466 (+) |
| G295353 | NA | non-coding | downstream | 22646 | 74168396 ~ 74168696 (+) |
| G295354 | NA | non-coding | downstream | 25817 | 74171567 ~ 74171916 (+) |
| G295356 | NA | non-coding | downstream | 30229 | 74175979 ~ 74176219 (+) |
| G295357 | NA | non-coding | downstream | 30673 | 74176423 ~ 74176652 (+) |
| G295230 | NA | other | upstream | 160540 | 73953246 ~ 73957789 (+) |
| ecrg4a | cssa25h2orf40 | other | upstream | 955926 | 73148293 ~ 73162405 (+) |
| LOC110520546 | LOC106586770 | other | upstream | 977704 | 73133510 ~ 73140625 (+) |
| c3h2orf49 | cssa25h2orf49 | other | upstream | 1095387 | 73018800 ~ 73022950 (+) |
| G294772 | NA | other | upstream | 1218695 | 72899268 ~ 72899634 (+) |
| G295359 | NA | other | downstream | 32693 | 74178443 ~ 74179342 (+) |
| G295421 | NA | other | downstream | 156352 | 74302102 ~ 74302604 (+) |
| G295541 | NA | other | downstream | 347554 | 74493304 ~ 74496718 (+) |
| G295558 | NA | other | downstream | 368393 | 74514143 ~ 74533086 (+) |
| G296694 | NA | other | downstream | 724204 | 74869954 ~ 74872909 (+) |
