Item | Value |
---|---|
gene id | LOC110504742 |
gene name | LOC106586786 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 74165518 ~ 74438687 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: peripheral plasma membrane protein CASK-like isoform X8 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036975206.1 | False | 1752 | mRNA | 0.52 | 16 | 74165518 | 74246111 |
XM_036975194.1 | False | 3720 | mRNA | 0.51 | 27 | 74165518 | 74438683 |
XM_036975195.1 | False | 3717 | mRNA | 0.51 | 27 | 74165518 | 74438683 |
XM_036975196.1 | False | 3702 | mRNA | 0.51 | 26 | 74165518 | 74438683 |
XM_036975198.1 | False | 3699 | mRNA | 0.51 | 26 | 74165518 | 74438683 |
XM_036975203.1 | False | 3624 | mRNA | 0.51 | 25 | 74165518 | 74438683 |
XM_036975192.1 | False | 3748 | mRNA | 0.51 | 27 | 74165518 | 74438684 |
XM_036975193.1 | False | 3745 | mRNA | 0.51 | 27 | 74165518 | 74438684 |
XM_036975201.1 | False | 3646 | mRNA | 0.51 | 26 | 74165518 | 74438684 |
XM_036975188.1 | False | 3767 | mRNA | 0.51 | 28 | 74165518 | 74438685 |
XM_036975189.1 | False | 3602 | mRNA | 0.51 | 29 | 74165518 | 74438685 |
XM_036975190.1 | False | 3764 | mRNA | 0.51 | 28 | 74165518 | 74438685 |
XM_036975197.1 | False | 3704 | mRNA | 0.51 | 27 | 74165518 | 74438685 |
XM_036975200.1 | False | 3692 | mRNA | 0.51 | 27 | 74165518 | 74438685 |
XM_036975202.1 | False | 3630 | mRNA | 0.51 | 26 | 74165518 | 74438686 |
XM_036975191.1 | False | 3754 | mRNA | 0.51 | 28 | 74165518 | 74438687 |
XM_036975207.1 | False | 3733 | mRNA | 0.51 | 27 | 74165518 | 74438687 |
XM_036975205.1 | False | 1990 | mRNA | 0.52 | 17 | 74165519 | 74249665 |
XM_036975204.1 | True | 2326 | mRNA | 0.51 | 17 | 74165519 | 74250202 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC100136284 | LOC106586796 | coding | downstream | 58278 | 74104520 ~ 74107240 (-) |
LOC110520577 | LOC106586797 | coding | downstream | 136696 | 73985901 ~ 74028822 (-) |
LOC118964361 | NA | coding | downstream | 187967 | 73977380 ~ 73977551 (-) |
LOC118964353 | NA | coding | downstream | 191079 | 73974330 ~ 73974439 (-) |
LOC118964355 | NA | coding | downstream | 191903 | 73973452 ~ 73973615 (-) |
LOC110520583 | LOC106586790 | coding | upstream | 35271 | 74473958 ~ 74475223 (-) |
LOC100136729 | mao | coding | upstream | 57502 | 74496189 ~ 74562871 (-) |
LOC110520585 | LOC106586792 | coding | upstream | 147972 | 74586659 ~ 74645214 (-) |
LOC110520587 | LOC106586791 | coding | upstream | 238964 | 74677651 ~ 74680783 (-) |
LOC118964358 | NA | coding | upstream | 438861 | 74877548 ~ 74877702 (-) |
G296267 | NA | non-coding | downstream | 52218 | 74110956 ~ 74113300 (-) |
G296213 | NA | non-coding | downstream | 155842 | 74009319 ~ 74009676 (-) |
G296206 | NA | non-coding | downstream | 182140 | 73983102 ~ 73983378 (-) |
G296203 | NA | non-coding | downstream | 187570 | 73977611 ~ 73977948 (-) |
LOC110520576 | NA | non-coding | downstream | 200646 | 73960416 ~ 73973401 (-) |
G296457 | NA | non-coding | upstream | 18653 | 74457340 ~ 74457778 (-) |
G296469 | NA | non-coding | upstream | 42747 | 74481434 ~ 74481679 (-) |
G296479 | NA | non-coding | upstream | 53871 | 74492558 ~ 74492865 (-) |
G296480 | NA | non-coding | upstream | 59000 | 74497687 ~ 74498261 (-) |
G296481 | NA | non-coding | upstream | 59135 | 74497822 ~ 74500534 (-) |
G296166 | LOC106581959 | other | downstream | 285147 | 73877719 ~ 73880371 (-) |
LOC110520572 | cep97 | other | downstream | 291701 | 73870489 ~ 73877576 (-) |
G296100 | LOC106586751 | other | downstream | 355922 | 73808482 ~ 73809596 (-) |
G296102 | LOC106586753 | other | downstream | 390219 | 73773154 ~ 73775299 (-) |
G298065 | NA | other | upstream | 1521860 | 75960547 ~ 75963074 (-) |
G298131 | NA | other | upstream | 1616434 | 76055121 ~ 76057006 (-) |
G298192 | NA | other | upstream | 1727316 | 76166003 ~ 76166401 (-) |
G299024 | NA | other | upstream | 2344156 | 76782843 ~ 76787731 (-) |
pknox1.1 | pknox1 | other | upstream | 3397795 | 77832447 ~ 77844072 (-) |