LOC118944635


Basic Information

Item Value
gene id LOC118944635
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 76160117 ~ 76171119 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039942.1
CCCAGCTGACACGGCTCCTCATCAACAAGCGAGCCAATTGAGGCCAACATGACGTGgagccctcctccctcctcttccctgctCTCCGCAGTAAAACAATTAAGCTGTTTACTGGGTGAGGGATATCCGTCGAGCTACCCCGCAAATTGGTCTCCAGTGAGGGGCCCATTCCCCGGCAGTGCGGCCGGACAGCTGGAGGTGCTGGCGGAAGCCGATGTGCTCGGACCATCTGGAAAAAGTAGCAGGATTCCAAGGCTGACGACGAGTGATGTAAGCAGTTCCCTCTCTTCTGCAGTGATGTAAGCAGTTCCCTCTCTTCTGCAGTGATGTAAGCAGTTCCCTCTCTTCTGCAGTGATGTAAGcagttccctctcttctccagtGATGTAAGcagttccctctcttctccagtGATGTAAGCAGTTCCCTCTCTTCTGCAGTGATGTAAGCAGTTCCCTCTCTTCTGCAGTGATCCATCATTCCTTGCCTGTCGTACCTCAACTTTGGAGTTCATCTACTTTATACCAATGGATCTATCGAGTGCTGGAGATTTCAAGTTGAAGATTCTTAGGCTGAGTCATCGTTTCCACATGTACAGTAATTGATCCCCCTTCCCAGCAAGGAGTGCTGTACAAGCACCTTCTCATTATGTGGGTTGACTATCTTCACACGCTGACGAGCAGTGCAGGTAATTGAACCACCATCCTGTTTATATGGAGTTTCAAACAAAGTTGGGTGAGGGATTTGCAGACCTCGTGCAATCAATCACAGGTTAATGTGGTTTCGGCTCTTACCATCACTTTTATTCTGTCTTCAGTCACCTTTTCACCTTTCCCTCTGCTCCTTCCCCCATCTTCTATGTACACCATGCTAGCAGTCAACAGAAAGTCATTAAAATCACATTTCCTAAGAATGCCTTGTGCATAAAGTCAATACTACATAATTGGTTACAAATGCAGGATATGAAGTGCCTAATATAGGTGTCAATTGAAAAGTGTGTCAAAAAAGGTTGTATGACTTAAGAAATTAGATGCAGCAGAATTTCCCTTTCCTCAATGAATGTTCTGCATTTCTGAACCAAGGCCTTTGCTTGCACCCTATCGAATTGCCATCAAAACCAAAAAAGGTTACTGGTATGATAAAAAAGGTATTGTATCAGACCCATGCTGGTTTTATGTTTTTATCTcataatatgtacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039942.1 True 1201 mRNA 0.46 3 76160117 76171119

Neighbor

gene id symbol gene type direction distance location
LOC110520602 LOC100136552 coding downstream 41964 76102837 ~ 76118153 (-)
LOC110520599 LOC106586824 coding downstream 240425 75854733 ~ 75919692 (-)
trnaa-ugc-5 NA coding downstream 269680 75890365 ~ 75890437 (-)
LOC110520593 LOC106586828 coding downstream 531208 75582032 ~ 75628909 (-)
LOC110520594 LOC106586829 coding downstream 580592 75535014 ~ 75579525 (-)
LOC110520604 LOC106586822 coding upstream 349085 76520204 ~ 76857463 (-)
LOC110520605 LOC106586805 coding upstream 695111 76866230 ~ 76869000 (-)
LOC110520607 NA coding upstream 710371 76881490 ~ 76882509 (-)
LOC110520611 rab9a coding upstream 907619 77078738 ~ 77082651 (-)
LOC110504825 LOC106586814 coding upstream 913134 77084253 ~ 77102688 (-)
G298155 NA non-coding downstream 60679 76099079 ~ 76099438 (-)
G298154 NA non-coding downstream 63792 76093445 ~ 76096325 (-)
G298098 NA non-coding downstream 159092 75999839 ~ 76001025 (-)
G298067 NA non-coding downstream 194409 75964940 ~ 75965708 (-)
G298059 NA non-coding downstream 205276 75954528 ~ 75954841 (-)
G298197 NA non-coding upstream 6422 76177541 ~ 76177748 (-)
G298200 NA non-coding upstream 8999 76180118 ~ 76180438 (-)
G298307 NA non-coding upstream 90736 76261855 ~ 76262081 (-)
G298376 NA non-coding upstream 146036 76317155 ~ 76318606 (-)
G298467 NA non-coding upstream 214425 76385544 ~ 76385775 (-)
G298131 NA other downstream 103111 76055121 ~ 76057006 (-)
G298065 NA other downstream 197043 75960547 ~ 75963074 (-)
G296315 NA other downstream 1920322 74239187 ~ 74239795 (-)
LOC110520576 NA other downstream 2188287 73960416 ~ 73973401 (-)
G296166 LOC106581959 other downstream 2279746 73877719 ~ 73880371 (-)
G299024 NA other upstream 611724 76782843 ~ 76787731 (-)
pknox1.1 pknox1 other upstream 1665363 77832447 ~ 77844072 (-)
LOC110520626 ndufv3 other upstream 1673548 77844666 ~ 77850842 (-)
G300200 NA other upstream 1757367 77928486 ~ 77983204 (-)
G300251 NA other upstream 1863366 78034485 ~ 78035018 (-)

Expression


Co-expression Network