LOC110520620 (LOC106586837)


Basic Information

Item Value
gene id LOC110520620
gene name LOC106586837
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 77526470 ~ 77538361 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975248.1
tatgtgtgtgtgtgtgtatgtgtgtatgtgtgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatgtatacatacatatgtgTGTAAATAAATAAGAATTAGCCTCTAATCGAATGATGGTGTACCTCACACCTCTCAACATACATGTgtaatagagtaccacagtatgagtcaaaatacccataaaacctagcggtcaaatagggaaatggttccaatcgtttttgcACCCTTAATTTCTCCAATAGGGGATTTTAAAAATACTTAAAATAAGGGTCgagtttcgtgtaggcttaccatTGCTTGACGTTTTGATCTCtttaggacaaggtgacttttatcaatatattcgcctgtatttaccccccaaaaatgaaatgctaaaatgattggaaccatttccctgtttgactgttAGGTttcatgggtattatgacacctccactgtggggctctatgggCCCTTTTTAAGACTTAAAATCTAAACGTGGTCAAAGAGACACATTCTTACGTTTtggaaagaagaggaggatgtcttGGGTTCTCGATCTTCTGAGAGATTTCCACTTAACCTCCCAAAGTAGTGTCCATCACTCCAAGCTGTTCTGATGATGCACTCTGAGGAAGGCCAAACTCTATTTTAACTTAAGGTTGTTGGAATGGGAACTTCAGAAGGTCCTGAAGAAAGGCAATCAGAACCGATTTTTTTCAGGTAAGAGTCAAATTTTCATGTACTCACTAAAACACCTTGATACATTAAATAGTTACAACTATTATAATCTTAACTAATATGAGATGGTGAGTATAGTGATTTTGAACTCTCAGACAAAAATGGCAATACTGGTTTTTTTTTCTTGTGTATTTAAGGTCAGATCAAAACCATCTCCTACAGACTGTCCAATGAGGTTTGGACTTTCCGAGAAGAGTCTCACTTCCCTAAGATGGACATCATGAACTCCTCAGATATCTTCACCCTCCAGGGGGAGACGGACAGGCAGCACAGAGAGAGGAGAATACATTTGCTTCTGAGGTTCTATCCAAATGGCAAACCCTTCATCACGTTATATCCAGACGGAACAGGTAATGTGTTGTATCTTTTTATTTAAGAGACTCGGGCACCAGGCAATTGTACAACAGCTTAGCAATAAGTTCCTTAGTGAAAACAAAGCTATCCATCTGGGAATGTTGCTATCATCATCTCCTCTGTGGAGGCTGCTGACTTCACCTATATAATCATGGAGGACAAGGATTTAGAGCCAAACTTTGAGGCCATGTTTACAACCAGAGGCCAGTCTACGTGCTACCACCCCAATGGACTTATATGggtgaACCTGACTCAGCTGGGAGGCTCCTGCTGCAGTGAGACCGGGGCTCTGAGACGACGCTGGACCTGGCTGGACCTTGAGCCTCACATCCAAGCCCCTCCCTTCCAGCCCATCTGTCTGGTCCTAGGTAGCCACGTCAGCCTCCGCATCCAGTCCCAGGAACGCATCTACCTCACATTCTCCTCTCACCAAAGCAGAGTACGTTTCAACGTGGGCTCCAAACTCAAGCTAACCCATCCGGAAGGCCTAGTGATGCCGGGGCCAGACATCCTGCAACAACATCTCCAAATGAAAAGCCTGGAGATTTACACTCTGCTGGACCGGATGCAGACCTGCATGGCCTACCAGCACTCGGCCAATCCCCACAACATTAAGCCCCAGTACAGCCTCGTTGCCCAGATGCAGAGACTCAAGAGACAGATGGAAAAACAGAGTTCACCCAAAAACACCAAAGCTCTCATGGCCTCTAAGGACTTATAACAACTGACAACTCAAAGCCTGTGTTGTTCTAGAATTCATATTGTTGCTATGAAACCAAGGCATTTAGCATTTTATTCTAATTAGAAATAAATGCAGTAGCCATGTGTAGCTATGCTAAAATATTAGAAAAGACTGGTCATGTTTCTTGTCAGATACATTTTGAATAGATTTAATGGTTGGCCCATTGTGCAAATTAAGAAATTAGTCAGCAGTCTAAGGAAAATGATGAATGAGGCACCTCACTCTTCAATCACAAGTAGGCCTAGAAGATTCAGTTGAGGTCCCAACAACCCTTGAACCCACCAACCCAGCCGTTTAATGTTGCTGGTCGGCTGTACAGCTGCCACGCGACTTGAAGGATGTGTAGTGATGCAGGAAACCTACAAACGGGGTAATAATGTTTTGACTAACTAGTTTTATACTGACTCGGTGCAGGTATCATAGCTAACTCCGAATCTTCAATAGAAATAGGCCACGGTAGACAGAACCTTAATTACTCATCTGTGCAGCAGCCTGAAGGTCAACTGATTGACCATGACATTTCTGAACAGTCTCTTCAGAGGAGCTGTGTCTGCGATGTTATGCCCACGGCATTTACATAATTTAAGTAAAAATAAATCTTGTGAGTTAATTTAAGA

Function

NR:

description
glutamate-rich protein 6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975248.1 True 2449 mRNA 0.42 4 77526470 77538361

Neighbor

gene id symbol gene type direction distance location
LOC110520616 LOC106586811 coding downstream 281050 77174734 ~ 77245420 (-)
tlr7 LOC106586812 coding downstream 353233 77164642 ~ 77173237 (-)
LOC110520614 LOC100302030 coding downstream 362024 77152248 ~ 77164446 (-)
LOC110520613 NA coding downstream 374591 77149891 ~ 77151879 (-)
LOC110504825 LOC106586814 coding downstream 423782 77084253 ~ 77102688 (-)
LOC118944720 LOC106581911 coding upstream 28995 77567356 ~ 77569192 (-)
LOC110520621 LOC106586835 coding upstream 34798 77573159 ~ 77577004 (-)
pknox1.1 pknox1 coding upstream 294086 77832447 ~ 77844072 (-)
LOC110520626 ndufv3 coding upstream 306305 77844666 ~ 77850842 (-)
LOC110520627 LOC106586850 coding upstream 314442 77852803 ~ 77860500 (-)
G299695 NA non-coding downstream 49065 77476623 ~ 77477405 (-)
G299690 LOC106586808 non-coding downstream 52037 77469081 ~ 77474433 (-)
G299693 NA non-coding downstream 52444 77472579 ~ 77474026 (-)
G299691 NA non-coding downstream 56326 77469787 ~ 77470144 (-)
G299676 NA non-coding downstream 79665 77442999 ~ 77446805 (-)
G299794 NA non-coding upstream 44682 77583043 ~ 77583359 (-)
G299795 NA non-coding upstream 45927 77584288 ~ 77584549 (-)
G299796 NA non-coding upstream 47089 77585450 ~ 77585707 (-)
G299809 NA non-coding upstream 70215 77608576 ~ 77609089 (-)
G299811 NA non-coding upstream 72912 77611273 ~ 77611547 (-)
G299024 NA other downstream 738739 76782843 ~ 76787731 (-)
G298192 NA other downstream 1360069 76166003 ~ 76166401 (-)
G298131 NA other downstream 1469464 76055121 ~ 76057006 (-)
G298065 NA other downstream 1563396 75960547 ~ 75963074 (-)
G296315 NA other downstream 3286675 74239187 ~ 74239795 (-)
G300200 NA other upstream 390125 77928486 ~ 77983204 (-)
G300251 NA other upstream 496124 78034485 ~ 78035018 (-)
G300470 NA other upstream 755422 78293783 ~ 78294220 (-)

Expression


Co-expression Network