LOC110520656 (LOC106586902)


Basic Information

Item Value
gene id LOC110520656
gene name LOC106586902
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 81012098 ~ 81038367 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975305.1
GTCAAACATAAATTAGCCACAACCGATAGGATTTTGTCAACGTGACTGGAACGATTCTCGCATGGTCTCAACAGGACTGCCTGTAGTGGGTAATATAAAGCCGACCACGGGTTCACCGGCGTTTGTAGAACTTGATCACCGCGGATACGAACAGAAGGATGTCCACAGCGTCTTACTCGGAGAGGGTCACAATGGGGCCCCTGGTCGCAGCTATCGATCAAGGCACAAGCTCGACGAGGTTTCTGGTGTTCGATTCTAAAACGGCAGAGCTGCTTAGTCACCACCAGGTTGGGATAAAGCAGAGTTTCCCTAAAGAGGGctgggTAGAAGAGGACCCTAAGGAGATTCTTCAGTCAGTTTATGAGTGTATGGAGAGGACCTGTGAGAAGCTCGGCCAGCTCAACATAGACATCTCCAACATTAAAGCTGTCGGCGTGACCAATCAGAGAGAGACTACGCTGGTTTGGGACAAAGAGACGGGGGAACCGCTCTACAATGCCATTGTTTGGCTGGACCTTCGTACACAGTCCACAGTGGAGAGGCTGATCAACAGCACCCCGGGAAAGAACAAGAACCAGCTGAAGcacaAGACCGGTCTGCCCATCAGTACATACTTCAGTGCTGTGAAGCTGCGTTGGCTCATGGACAACGTGGAGGAGGTCGCTGAGGCTGTCCTGACACACAGAGCCATGTTCGGCACCGTGGACTCCTGGCTTATCTGGTGTCTGACAGGGGGGAAGAGTGGAGGGGTGCATGTCACAGATGTGACCAATGCAAGTCGCACCATGCTCTTCAATATACACACCCTGGACTGGGACCCCGAGCTCTGCaaATATTTTGATGTCCCAATGGAAATTCTACCCCAAGTGAAGAGCTCCTCAGAAATATACGGTTCAATGAACTCTGGTTCTCTGGCAGGAGTTCCCATCTCCGGGTGTCTCGGGGACCAGTCCGCCGCTCTGGTTGGTCAGATGTGCTTCCAGGATGGACAGGCTAAAAACACGTACGGAACAGGCTGCTTCCTGCTGAGAAACACAGGGATCAAGCCAGTGATGTCAGATCACGGCCTCCTGACCACACTGGCCTACAAACTGGGGAAGGACTCACCAGCCCACTACGCTCTCGAGGGGTCGGTGGCCATAGCTGGCGCGGTGGTACGCTGGCTGAAAGATAACCTGGGAATCATCCAATCCTCCGCAGAGATCGAGAAGCTGGCAGGTGATGTGGGCTCGTCCTATGGATGTTACTTTGTTCCTGCCTTCTCCGGGCTGTACGCCCCCTACTGGGAGCCCAGTGCACGAGGTATCATCTGTGGCCTGACTCAGTTCACTAACAGATCTCACCTGGCCTTCGCTGCGCTGGAGGCTGTCTGTTTTCAGACTAGAGAGATCCTGGAGGCTATGAATCAGGATTATGGGGTTCCTTTGACCCAGCTCCAGGTGGACGGAGGCATGACCTCCAACAGACTACTGATGCAGCTTCAAGCTGATGTACTCTGCATCCCCGTGGTGAAGCCGTCCATGTCGGAGACCACGGCGCTGGGCGCCGCCatggcagcaggagcagcagaggGGGTGGGTGTCTGGAGTCTGACCCCTGGTAACCTCACAACCATCCCCACCGACAAATACCAACCCCTGATCAACCCTGAGGAGAGTGAGTTCCGGTACGCACGATGGAAGAAGGCCGTCCAGAAGGCCATGAATTGGGAGACCACGGAGCCCATCATCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGgacaccactaGTAGGATCTGAGCCAACACTAGGAACCGTTGAGGATACATATGGAGTTGAGGAGAGGGGGAACATACAGAATGTCACACCCGTCCCTCCATAGGTCCACATGGCACCTACATCTGATGGCTGTTTGGGCATGCTGTGGACTCCCTTTCCATCTGAGAGCATTCCTGGTCCACATCCTGTTGCCTCCTGTACATGTACTCAGCCCCGTTCTCTTAGTCCCATGGACAAGGGCCCTGTGAACCTGTGAACCTTTTATCTTGGAAGAAAGGCCCAAAGATGGAATCAATTGATGGAACTCGACTGTGTGTCTGAACTGTGATGGAAGAGACTGATTCTCCTGTGGAAGGAAAAAAAAACATCCAATCGTGTCTTGTTTTCTATGAATTTATTAAGCAGATATTTTTAATGTTTTTATCTTTTTTGTTTGTGTCAGATGTTGTGacactgtacatttttttttaatttttttttaaattacagatTAATTACACTGGTTAGTAATAGCGCCACCTTGTAACCAGTGTTGTGAGAATGTtgtaggctacatatctataatgtGGAATGGAAGGCCCGCTGGGAGATGGTTTGCTACTCTGATGATCGTAGATGTACCTAGTTATATGTGGGTCCACTTGAAGGAACCTCTGTATGAAAAGCATTTGCAGGGTCCTTACAGCACTTTACAATGATTGATTTACGTGTGGAGTGCATGATATGAGTACGACGCTCTGGATTTTTAAAGGGACATTttgtgtatttaaaaaataataattaaataccGATTTTAAGGGATCATCAGTGGATAATGAAAGGTCTGTGAAACACATTTACTACTTAAGTTGCAAGTGGAAGTTTTAACTACAAAATGCTTCATAAGACCTGTGTTTTTCAGTCGTTCAAGAAAAGTATATTACTTCCTAATTACATTTTTTGGTCATGAATTGTCTTGTCCTTACAGCACTTTATAATGATTGATTTGCATGTGGACTTCATGGTATGGGTACAATGCGCTAATGtaaatgataaaaaaaataagtCAATTAACAGTAATGCTTTTTGTCAAGAGATGTATTATCAATTGATAATGAATTGTGGGGATCAATGTGAAGGCCAGAAATAACAAAGTGACAGAGAAATCTAAAATGTTAACTGTACAAGATGATCTGTTTTGGTTATTAATTTACTGAGGAATGTCAACCTGGTAAAATTGTTGTAAAGAGGAAATGAATCCAATGTGCTTCATATCCCAAATGGCTGCTTTTCAGACATGGATACAGAGAAGCATGGTCTGGACCTTGTTATGTATAAAGATCTTATACGTTTTCAGTAACGTCTGTAAAATCTAATATGAAAATCTAAAGCCCTCGTTCTGTGTATGGAAAGAAAAGGACACTAATCTTAaagttgttttaaaaaaatgttttaaactaCACATTTCATTTAAATTGTTTTTGTTGTAATTATTTAATGTTTTATTAGATTTGTCCTTGTTTGTCTTTTCCTGAAAAATGGGTTTGGGTGCCTCCTATTCTGTTGTGCAAAGAAGAATGTGACAATGCACATTGCAATAAAATGTTACTTTTTAAAAA
>XM_036975306.1
GTCAAACATAAATTAGCCACAACCGATAGGATTTTGTCAACGTGACTGGAACGATTCTCGCATGGTCTCAACAGGACTGCCTGTAGTGGGTAATATAAAGCCGACCACGGGTTCACCGGCGTTTGTAGAACTTGATCACCGCGGATACGAACAGAAGGATGTCCACAGCGTCTTACTCGGAGAGGGTCACAATGGGGCCCCTGGTCGCAGCTATCGATCAAGGCACAAGCTCGACGAGGTTTCTGGTGTTCGATTCTAAAACGGCAGAGCTGCTTAGTCACCACCAGGTTGGGATAAAGCAGAGTTTCCCTAAAGAGGGctgggTAGAAGAGGACCCTAAGGAGATTCTTCAGTCAGTTTATGAGTGTATGGAGAGGACCTGTGAGAAGCTCGGCCAGCTCAACATAGACATCTCCAACATTAAAGCTGTCGGCGTGACCAATCAGAGAGAGACTACGCTGGTTTGGGACAAAGAGACGGGGGAACCGCTCTACAATGCCATTGTTTGGCTGGACCTTCGTACACAGTCCACAGTGGAGAGGCTGATCAACAGCACCCCGGGAAAGAACAAGAACCAGCTGAAGcacaAGACCGGTCTGCCCATCAGTACATACTTCAGTGCTGTGAAGCTGCGTTGGCTCATGGACAACGTGGAGGAGGTCGCTGAGGCTGTCCTGACACACAGAGCCATGTTCGGCACCGTGGACTCCTGGCTTATCTGGTGTCTGACAGGGGGGAAGAGTGGAGGGGTGCATGTCACAGATGTGACCAATGCAAGTCGCACCATGCTCTTCAATATACACACCCTGGACTGGGACCCCGAGCTCTGCaaATATTTTGATGTCCCAATGGAAATTCTACCCCAAGTGAAGAGCTCCTCAGAAATATACGGTTCAATGAACTCTGGTTCTCTGGCAGGAGTTCCCATCTCCGGGTGTCTCGGGGACCAGTCCGCCGCTCTGGTTGGTCAGATGTGCTTCCAGGATGGACAGGCTAAAAACACGTACGGAACAGGCTGCTTCCTGCTGAGAAACACAGGGATCAAGCCAGTGATGTCAGATCACGGCCTCCTGACCACACTGGCCTACAAACTGGGGAAGGACTCACCAGCCCACTACGCTCTCGAGGGGTCGGTGGCCATAGCTGGCGCGGTGGTACGCTGGCTGAAAGATAACCTGGGAATCATCCAATCCTCCGCAGAGATCGAGAAGCTGGCAGGTGATGTGGGCTCGTCCTATGGATGTTACTTTGTTCCTGCCTTCTCCGGGCTGTACGCCCCCTACTGGGAGCCCAGTGCACGAGGTATCATCTGTGGCCTGACTCAGTTCACTAACAGATCTCACCTGGCCTTCGCTGCGCTGGAGGCTGTCTGTTTTCAGACTAGAGAGATCCTGGAGGCTATGAATCAGGATTATGGGGTTCCTTTGACCCAGCTCCAGGTGGACGGAGGCATGACCTCCAACAGACTACTGATGCAGCTTCAAGCTGATGTACTCTGCATCCCCGTGGTGAAGCCGTCCATGTCGGAGACCACGGCGCTGGGCGCCGCCatggcagcaggagcagcagaggGGGTGGGTGTCTGGAGTCTGACCCCTGGTAACCTCACAACCATCCCCACCGACAAATACCAACCCCTGATCAACCCTGAGGAGAGTGAGTTCCGGTACGCACGATGGAAGAAGGCCGTCCAGAAGGCCATGAATTGGGAGACCACGGAGCCCATCATCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGGTCAGCAATGGGAACGGCCCGgacaccactaGTAGGATCTGAGCCAACACTAGGAACCGTTGAGGATACATATGGAGTTGAGGAGAGGGGGAACATACAGAATGTCACACCCGTCCCTCCATAGGTCCACATGGCACCTACATCTGATGGCTGTTTGGGCATGCTGTGGACTCCCTTTCCATCTGAGAGCATTCCTGGTCCACATCCTGTTGCCTCCTGTACATGTACTCAGCCCCGTTCTCTTAGTCCCATGGACAAGGGCCCTGTGAACCTGTGAACCTTTTATCTTGGAAGAAAGGCCCAAAGATGGAATCAATTGATGGAACTCGACTGTGTGTCTGAACTGTGATGGAAGAGACTGATTCTCCTGTGGAAGGAAAAAAAAACATCCAATCGTGTCTTGTTTTCTATGAATTTATTAAGCAGATATTTTTAATGTTTTTATCTTTTTTGTTTGTGTCAGATGTTGTGacactgtacatttttttttaatttttttttaaattacagatTAATTACACTGGTTAGTAATAGCGCCACCTTGTAACCAGTGTTGTGAGAATGTtgtaggctacatatctataatgtGGAATGGAAGGCCCGCTGGGAGATGGTTTGCTACTCTGATGATCGTAGATGTACCTAGTTATATGTGGGTCCACTTGAAGGAACCTCTGTATGAAAAGCATTTGCAGGGTCCTTACAGCACTTTACAATGATTGATTTACGTGTGGAGTGCATGATATGAGTACGACGCTCTGGATTTTTAAAGGGACATTttgtgtatttaaaaaataataattaaataccGATTTTAAGGGATCATCAGTGGATAATGAAAGGTCTGTGAAACACATTTACTACTTAAGTTGCAAGTGGAAGTTTTAACTACAAAATGCTTCATAAGACCTGTGTTTTTCAGTCGTTCAAGAAAAGTATATTACTTCCTAATTACATTTTTTGGTCATGAATTGTCTTGTCCTTACAGCACTTTATAATGATTGATTTGCATGTGGACTTCATGGTATGGGTACAATGCGCTAATGtaaatgataaaaaaaataagtCAATTAACAGTAATGCTTTTTGTCAAGAGATGTATTATCAATTGATAATGAATTGTGGGGATCAATGTGAAGGCCAGAAATAACAAAGTGACAGAGAAATCTAAAATGTTAACTGTACAAGATGATCTGTTTTGGTTATTAATTTACTGAGGAATGTCAACCTGGTAAAATTGTTGTAAAGAGGAAATGAATCCAATGTGCTTCATATCCCAAATGGCTGCTTTTCAGACATGGATACAGAGAAGCATGGTCTGGACCTTGTTATGTATAAAGATCTTATACGTTTTCAGTAACGTCTGTAAAATCTAATATGAAAATCTAAAGCCCTCGTTCTGTGTATGGAAAGAAAAGGACACTAATCTTAaagttgttttaaaaaaatgttttaaactaCACATTTCATTTAAATTGTTTTTGTTGTAATTATTTAATGTTTTATTAGATTTGTCCTTGTTTGTCTTTTCCTGAAAAATGGGTTTGGGTGCCTCCTATTCTGTTGTGCAAAGAAGAATGTGACAATGCACATTGCAATAAAATGTTACTTTTTAAAAA

Function

NR:

description
glycerol kinase-like

GO:

id name namespace
GO:0006072 glycerol-3-phosphate metabolic process biological_process
GO:0005975 carbohydrate metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0004370 glycerol kinase activity molecular_function

KEGG:

id description
K00864 glpK, GK; glycerol kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975305.1 False 3467 mRNA 0.46 19 81012098 81038367
XM_036975306.1 True 3451 mRNA 0.46 19 81012098 81038367

Neighbor

gene id symbol gene type direction distance location
LOC110520654 LOC106586898 coding downstream 27715 80979138 ~ 80984383 (-)
LOC110520653 LOC106586906 coding downstream 103749 80905040 ~ 80908349 (-)
LOC110518808 fam160a2 coding downstream 137974 80796995 ~ 80874124 (-)
hpxa hpx coding downstream 353438 80645997 ~ 80658660 (-)
LOC110520649 LOC106586884 coding downstream 458831 80551048 ~ 80553267 (-)
si:dkey-69o16.5 pepe coding upstream 838254 81876621 ~ 81887719 (-)
slc23a3 LOC106586913 coding upstream 928763 81967130 ~ 81979522 (-)
LOC110510426 bin1 coding upstream 955684 81994051 ~ 82040699 (-)
LOC118964332 NA coding upstream 984468 82022835 ~ 82023180 (-)
LOC118964333 NA coding upstream 984912 82023279 ~ 82023723 (-)
G302848 NA non-coding downstream 8780 81002951 ~ 81003318 (-)
G302826 LOC106586879 non-coding downstream 46868 80964355 ~ 80965230 (-)
G302777 NA non-coding downstream 161346 80850156 ~ 80850752 (-)
G302771 NA non-coding downstream 176192 80834394 ~ 80835906 (-)
G302765 NA non-coding downstream 193395 80817772 ~ 80818703 (-)
G302862 NA non-coding upstream 2038 81040405 ~ 81040901 (-)
G302863 NA non-coding upstream 2992 81041359 ~ 81041942 (-)
G302866 NA non-coding upstream 7772 81046139 ~ 81046594 (-)
G302873 NA non-coding upstream 19171 81057538 ~ 81058150 (-)
G302874 NA non-coding upstream 19818 81058185 ~ 81058603 (-)
G302725 NA other downstream 289475 80721738 ~ 80722623 (-)
G302724 NA other downstream 290417 80720717 ~ 80721681 (-)
G302660 NA other downstream 328912 80680986 ~ 80683186 (-)
G302399 LOC106581475 other downstream 503801 80507935 ~ 80508297 (-)
LOC110520645 LOC106586879 other downstream 590953 80402867 ~ 80421221 (-)
G303663 NA other upstream 983021 82021388 ~ 82022265 (-)
G303665 NA other upstream 984462 82022829 ~ 82023451 (-)
pard3bb LOC106601765 other upstream 1259389 82297732 ~ 82586082 (-)
LOC110505453 LOC106586926 other upstream 1706877 82744854 ~ 82747738 (-)
G304204 LOC107714908 other upstream 1793003 82831370 ~ 82851751 (-)

Expression


Co-expression Network