Gene
RNA
| Item | Value |
|---|---|
| gene id | si:dkey-69o16.5 |
| gene name | pepe |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 81876621 ~ 81887719 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| pepe | dipeptidase E |
| description |
|---|
| PREDICTED: alpha-aspartyl dipeptidase isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| K05995 | pepE; dipeptidase E |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021598650.2 | True | 1290 | mRNA | 0.47 | 9 | 81876621 | 81887719 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520656 | LOC106586902 | coding | downstream | 838254 | 81012098 ~ 81038367 (-) |
| LOC110520654 | LOC106586898 | coding | downstream | 892238 | 80979138 ~ 80984383 (-) |
| LOC110520653 | LOC106586906 | coding | downstream | 968272 | 80905040 ~ 80908349 (-) |
| LOC110518808 | fam160a2 | coding | downstream | 1002497 | 80796995 ~ 80874124 (-) |
| hpxa | hpx | coding | downstream | 1217961 | 80645997 ~ 80658660 (-) |
| slc23a3 | LOC106586913 | coding | upstream | 79411 | 81967130 ~ 81979522 (-) |
| LOC110510426 | bin1 | coding | upstream | 106332 | 81994051 ~ 82040699 (-) |
| LOC118964332 | NA | coding | upstream | 135116 | 82022835 ~ 82023180 (-) |
| LOC118964333 | NA | coding | upstream | 135560 | 82023279 ~ 82023723 (-) |
| LOC110520662 | des | coding | upstream | 218179 | 82105898 ~ 82143081 (-) |
| G303510 | NA | non-coding | downstream | 40570 | 81833637 ~ 81836051 (-) |
| G303450 | NA | non-coding | downstream | 97140 | 81777909 ~ 81779481 (-) |
| G303374 | NA | non-coding | downstream | 298600 | 81577543 ~ 81578021 (-) |
| G303370 | NA | non-coding | downstream | 304899 | 81571087 ~ 81571722 (-) |
| G303361 | NA | non-coding | downstream | 308048 | 81541889 ~ 81568573 (-) |
| G303523 | NA | non-coding | upstream | 215 | 81887934 ~ 81888169 (-) |
| G303526 | NA | non-coding | upstream | 1040 | 81888759 ~ 81889888 (-) |
| G303534 | NA | non-coding | upstream | 16817 | 81904536 ~ 81904810 (-) |
| G303659 | NA | non-coding | upstream | 95247 | 81982966 ~ 82019757 (-) |
| G303660 | NA | non-coding | upstream | 96458 | 81984177 ~ 81985757 (-) |
| G302725 | NA | other | downstream | 1153998 | 80721738 ~ 80722623 (-) |
| G302724 | NA | other | downstream | 1154940 | 80720717 ~ 80721681 (-) |
| G302660 | NA | other | downstream | 1193435 | 80680986 ~ 80683186 (-) |
| G302399 | LOC106581475 | other | downstream | 1368324 | 80507935 ~ 80508297 (-) |
| LOC110520645 | LOC106586879 | other | downstream | 1455476 | 80402867 ~ 80421221 (-) |
| G303663 | NA | other | upstream | 133669 | 82021388 ~ 82022265 (-) |
| G303665 | NA | other | upstream | 135110 | 82022829 ~ 82023451 (-) |
| pard3bb | LOC106601765 | other | upstream | 410037 | 82297732 ~ 82586082 (-) |
| LOC110505453 | LOC106586926 | other | upstream | 857525 | 82744854 ~ 82747738 (-) |
| G304204 | LOC107714908 | other | upstream | 943651 | 82831370 ~ 82851751 (-) |
