abcb6b (LOC106586936)


Basic Information

Item Value
gene id abcb6b
gene name LOC106586936
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83546922 ~ 83612879 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965263.1
ACAGCCTGACAATAGAAGACAACAGAAAGACAGTGAGCCTCCATCTATGTCCATCCCATCCACATCCAAGTCGTCCCAGACCGTGTCAACATGGCATGGTTTTGGGCAGAAGGTGCGTCTCCTGGCCCCTTACCTGTGGCCCCGGGGCAGCCTGCCTCTTCAGGTAATGGTCCTGCTCTGTCTGGCCCTACTGGCCATGGAAAGGGTCATCAACGTCTTCGTCCCCATCTACTCCAAAAACATAGTGAATAATCTGTCTGATGGCAGCAGCTGGAGGACCCTGGCCACCACCGTGTGTATTTATGTCCTGCTCAAATTCCTCCAGGGTGGAGGGGCAGgtaCATCAGGGTTTATCAGTAACCTGAGGTCCTTCCTGTGGACGCAGGTCCAGCAGTACACCAGCAGGGTGGTTCAGGTCCGTCTGTTTGGTCACCTCCACTCCCTGTCGTTGCGCTGGCATCTTGGGAGACACACTGGGGACGTTCTGAGTAGTGTAGACCGAGGAACATCTTCTATCAACAACCTGCTCAGctACATCATCTTCAGTATCCTGCCCACCATCGCTGATATAGTCATCGCCATCCTCTACTTTGTATCCTACTTCAGTGCCTTGTTCGGCCTCATCGTCTTCATCTGCTTGCTGATCTACCTCACTTTCACCATCCTGATCACTGAGTGGAGGACCAAGTACAGACGAGACATGAACACTCAGGACAACAACGCCAAGTCTAAGGCTGTGGACTCGCTGCTCAACTTTGAGACGGTGAAATATTACAATGCTGAGGGGTATGAAGTGACCTGCTTCGAGGAGGCAATTCTGAAGTACCAGCAGTCAGAGTGGAAGACCAACGCCTCGTTGGCCCTActgaaccagacccagaacctgATCATTGGCTCAGGGCTATTAGCAGGTTCTCTGCTCTGTGCTTACATGGTCACAGAAGGCCAGTTCCAGGTTGGTGACTATGTCCTGTTTGGCACCTACATCATCCAGCTGTACACTCCTCTCAACTGGTTTGGTACATATTACAGACTAATCCAGAGTTCCTTTATTGACATGGAGAACATGTTCAAGATcttaacagaacacagagGGTTGTGGGACTGTGGGACCTTGGGCTGTGGGCTGTGTTGCTGTGtgactGTGAAAGACGATGTCAGCGCCACAGACCTCCAGTTGACAACCGGCGAGGTGAAGTTTCAGAACGTGTGCTTCAGCTACACTGAGGGGAATGTGATTCTCAGGGGTATATCGTTCACTGTGATGGCCGGCCAGACTGTTGCTCTGgtggGCCCGTCTGGTTCAGGTAAAAGCACTATCCTCCGTCTGCTGTTTCGCTTCTATGACGTCCAGGGAGGATGCATCCGTATTGATGAGCAGGATATATCCAGGGTGACCCAGACCTCTCTCCGCTCCTACATCGGTGTGGTTCCTCAGGACACGGTGCTCTTCAATGACAGCATAAGAAACAACATCCGGTACGGACGCATTCCCGCTAGTGAccaggaggtggaggaggctGCCCTCACTGCGGACATACACTACAAGATCCTGTCACTACCTGAggGGTATGAGACccaggtgggagagaggggtCTGAAGCTgagtggaggagagaaacagagagtagcCATCGCCCGTACAATCCTGAAGGACCCCCGTATTATACTGCTGGATGAggccaCGTCAGCcctggacacacagacagaacgcAACATCCAGGCTTCACTCTCCAAAGTCTGTGCCAACAGGACCACTATAGTAGTAACACACAGATTGTCGACCATCGTTGGCTCAGACCAGATCCTGGTAGTCCATGATGGCCAGATTGCcgagagagggaggcatGAGGAGTTGCTGTCCCAGGGAGGTTTGTACTCTGCTATGTGGCTGAaacagcagcacagcacagccaaGACAGAAACATACAACTCTAACCCAGAGGGTCAGCAGGCCACTACTCCCCACCACGGTCCCTGAGCCAGTATCCCAGCACAGAGCTAACCTACAGCTGACCAGGGAACAGAGGAGCAGATTGAGCCAGGATAGAGCTCAACCATCTGAAGGAAAAGATTCAACTCATATTGTGGCATTTTGGGCGGGTACGGCAAGGTTCTGAGGCGAGTTTCAAACTTAGCATCCTAAGGTACATTACTGCTGCTCCAAGAAAAGCTAGTTACACTAGACGGTAACTTTACAAAGCTAGTTACACTGGACGGTGACTTTACAAAGCTAGTTACACTAGATGGTAACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGACGGTGACTTTACAAAGCTAGTTACACTAGACGGTAACTTTACAAAGCTAGTTGCACTAGATGGTAACTTTACAAAGCTAGTTACACTAGACGGTAACTTTACAAAGCTAGTTACACTAGACGGTGACTTTACAAAGCTAGTTACACTAGACGGTAACTTTACAAAGCTAGTTATACTAGATGGTAACTTTACAAAGCTAGTTACACTAGACGGTGACTTTACAAAGCTAGTTACACTAGATGGTAACTTTACAAAGCTAGTTACACTAGATGGTAACTTTACAAAGCTAGTTACACTAGATGGTAACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGATGGTAACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGATGGCGACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGACGGTAACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGACGGTAACTTTACAAAGCTAGTTACACTAGATGGTAACTTTACAAAGCTAGTTACACTAGACGGTGACTTTACAAAGCTAGTTACACTAGACGGTAACTTTACAAAGCTAGTTACACTAGATGGTAACTTTACAAAGCTAGTTACACTAGATGGCGACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGACGGTAACCTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCTAGTTACACTAGATGGTGACTTTACAAAGCGAGTCACACTATATTTAATGATAACACGTGGTGTACGTGGGAAGTTAAAGCAGACTCTGGATGAGCTGTGTCAAAAAGCCTCAGACCAAAGATGATGAATTGTTGTTCATCTGTGTGTTAGAGGAAACACGCCAACTGTAACTGTGAATTCTACTGCTGTTTTATTAAACTGATCGTGACGGACATTTATTCAAGTCTTGATCAGTTGCACATCACCCATAAGTACATTGCAATAAATA

Function

NR:

description
PREDICTED: ATP-binding cassette sub-family B member 6, mitochondrial

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0061072 iris morphogenesis biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0042626 ATPase-coupled transmembrane transporter activity molecular_function

KEGG:

id description
K05661 ABCB6; ATP-binding cassette, subfamily B (MDR/TAP), member 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965263.1 True 3403 mRNA 0.47 18 83546922 83612879

Neighbor

gene id symbol gene type direction distance location
ttll4 ttll4 coding downstream 7567 83483453 ~ 83539355 (-)
LOC110504940 LOC106586933 coding downstream 353216 82905486 ~ 83193706 (-)
LOC110505453 LOC106586926 coding downstream 799188 82744854 ~ 82747738 (-)
pard3bb LOC106601765 coding downstream 960840 82297732 ~ 82586082 (-)
LOC110520662 des coding downstream 1403841 82105898 ~ 82143081 (-)
LOC110520669 LOC106586940 coding upstream 13690 83626569 ~ 83629281 (-)
LOC110505466 LOC106586938 coding upstream 26211 83639090 ~ 83643367 (-)
LOC118964336 NA coding upstream 34452 83646979 ~ 83770550 (-)
abi2a LOC106574254 coding upstream 302993 83915872 ~ 83986617 (-)
LOC110504983 LOC106586944 coding upstream 461059 84072966 ~ 84220262 (-)
G304639 NA non-coding downstream 53417 83491946 ~ 83493505 (-)
G304638 NA non-coding downstream 55877 83486903 ~ 83491045 (-)
G304635 NA non-coding downstream 63595 83482576 ~ 83483327 (-)
G304562 NA non-coding downstream 74679 83467511 ~ 83472243 (-)
G304687 NA non-coding upstream 4487 83617366 ~ 83619684 (-)
G304700 NA non-coding upstream 19479 83632358 ~ 83632679 (-)
G304701 NA non-coding upstream 19912 83632791 ~ 83633095 (-)
G304754 NA non-coding upstream 30492 83643371 ~ 83644447 (-)
G304762 NA non-coding upstream 31613 83644492 ~ 83644805 (-)
G304264 NA other downstream 595566 82950069 ~ 82951356 (-)
G304204 LOC107714908 other downstream 695171 82831370 ~ 82851751 (-)
G303665 NA other downstream 1523471 82022829 ~ 82023451 (-)
G305189 NA other upstream 568172 84181051 ~ 84182035 (-)
si:dkey-230p4.1 LOC106591428 other upstream 668604 84232727 ~ 84301357 (-)
LOC110520676 LOC106562996 other upstream 692425 84305303 ~ 84308440 (-)

Expression


Co-expression Network