Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118964338 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 84087709 ~ 84088210 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005051401.1 | False | 334 | mRNA | 0.37 | 3 | 84087709 | 84088202 |
| XR_005051400.1 | True | 342 | mRNA | 0.38 | 3 | 84087709 | 84088210 |
84,084,800
84,085,200
84,085,600
84,086,000
84,086,400
84,086,800
84,087,200
84,087,200
84,087,600
84,088,000
84,088,400
84,088,800
84,089,200
84,089,600
NC_048567.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504992 | LOC106591519 | coding | upstream | 21127 | 84017582 ~ 84066662 (+) |
| LOC110520680 | c1ql4 | coding | upstream | 80099 | 84006473 ~ 84007610 (+) |
| LOC110520666 | LOC106586946 | coding | upstream | 193290 | 83774817 ~ 83894419 (+) |
| LOC110518299 | LOC103024068 | coding | upstream | 644513 | 83440988 ~ 83443196 (+) |
| LOC110519361 | LOC106586922 | coding | upstream | 1189684 | 82855387 ~ 82898025 (+) |
| igf2bp2a | igf2bp2 | coding | downstream | 588925 | 84677135 ~ 84761793 (+) |
| LOC110520675 | LOC106586959 | coding | downstream | 788390 | 84876600 ~ 84892536 (+) |
| LOC110518240 | LOC106591790 | coding | downstream | 1009054 | 85097264 ~ 85227397 (+) |
| G305000 | NA | non-coding | upstream | 17879 | 84069606 ~ 84069830 (+) |
| G304999 | NA | non-coding | upstream | 18759 | 84068396 ~ 84068950 (+) |
| G304993 | NA | non-coding | upstream | 49758 | 84036504 ~ 84037951 (+) |
| G304989 | NA | non-coding | upstream | 60760 | 84025448 ~ 84026949 (+) |
| G305029 | NA | non-coding | downstream | 39672 | 84127882 ~ 84128116 (+) |
| G305040 | NA | non-coding | downstream | 71353 | 84159563 ~ 84164079 (+) |
| G305049 | NA | non-coding | downstream | 93969 | 84182179 ~ 84185612 (+) |
| G305051 | NA | non-coding | downstream | 98883 | 84187093 ~ 84188832 (+) |
| G305198 | NA | non-coding | downstream | 141794 | 84230004 ~ 84231601 (+) |
| G304948 | NA | other | upstream | 146766 | 83939207 ~ 83940943 (+) |
| G304931 | NA | other | upstream | 164704 | 83922485 ~ 83923005 (+) |
| G304929 | NA | other | upstream | 169895 | 83916885 ~ 83917814 (+) |
| G304430 | NA | other | upstream | 842889 | 83242370 ~ 83244820 (+) |
| G304158 | NA | other | upstream | 1259693 | 82827374 ~ 82828016 (+) |
| G305035 | NA | other | downstream | 64868 | 84153078 ~ 84162522 (+) |
| G305238 | NA | other | downstream | 226369 | 84312762 ~ 84315547 (+) |
| G305256 | LOC103150597 | other | downstream | 285450 | 84373660 ~ 84374128 (+) |
| G305614 | NA | other | downstream | 812841 | 84901051 ~ 84909355 (+) |
