G214609


Basic Information

Item Value
gene id G214609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 124105 ~ 125144 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244084
ATTTCAACATTAGGACCTAGGGATAACACTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTAGGGCTAACATTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTAGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAAAATGTGTTGGTTTTCATCTGTAACAAGTTTATCCAGTTtaacagaaataatcactttggCAAATGAAGGGACATTTACACATTTCTCTTCATTGTCAAACACATGTATTA
>TU244085
GACCTAGGGCTAACATTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTAGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTCAACATTAGGACCTAGGGCTAACACTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATATGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAATATTCAGGTAGATGTGTTGTGTATTCAACATTAGGACCTAGGGCTAACATTGCTAATATTCAGGTAGATGTGTTGTGTATTTCAACATTAGGACCTCGGGCTAACACTGCTAAAATGTGTTGGTTTTCATCTGTAACAAGTTTATCCAGTTtaacagaaataatcactttggCAAATGAAGGGACATTTACACATTTCTCTTCATTGTCAAACACATGTATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244084 False 316 lncRNA 0.50 2 124105 124816
TU244085 True 585 lncRNA 0.49 2 124105 125144

Neighbor

gene id symbol gene type direction distance location
LOC118964342 NA coding downstream 49552 63916 ~ 74553 (-)
irx4a LOC105016487 coding upstream 22596 147740 ~ 155571 (-)
LOC118944729 NA coding upstream 123894 247153 ~ 252277 (-)
irx2a irx2 coding upstream 385823 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 753856 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1446533 1571677 ~ 1581702 (-)
G214599 NA non-coding downstream 13760 109354 ~ 110345 (-)
G214597 NA non-coding downstream 15486 108021 ~ 108619 (-)
G214545 NA non-coding downstream 72077 41654 ~ 52028 (-)
G214549 NA non-coding downstream 89018 29481 ~ 35087 (-)
G214614 NA non-coding upstream 185 125329 ~ 125719 (-)
G214615 NA non-coding upstream 704 125848 ~ 129206 (-)
G214627 NA non-coding upstream 11648 136792 ~ 137029 (-)
G214651 NA non-coding upstream 39500 164644 ~ 164864 (-)
G214690 NA non-coding upstream 82523 207667 ~ 208245 (-)
G214663 NA other upstream 52579 177723 ~ 179591 (-)
G214982 NA other upstream 355903 481047 ~ 481609 (-)
G215354 NA other upstream 790815 915959 ~ 919673 (-)
G215950 NA other upstream 1475082 1600226 ~ 1618140 (-)
G215956 NA other upstream 1533936 1659080 ~ 1682022 (-)

Expression


Co-expression Network