G214651



Basic Information


Item Value
gene id G214651
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 164644 ~ 164864 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU244137
ATATcagagagacacgtgatcgtatgcgcgtgaatctacacctttttcctccctgagtattcattacacccAACCAGCTGCTCAGGAAACAATGGGCCCACTGCtggatctagttgatgatccctgccgtTGACTTCTATCACCTTGAAGAACAACAATGACCAATACAGTAACTGAGTACATTAAAACTTCAAGTGGTTTGTgatgatgtggctcagttg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU244137 True 221 lncRNA 0.43 1 164644 164864

Neighbor


gene id symbol gene type direction distance location
irx4a LOC105016487 coding downstream 9073 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 90091 63916 ~ 74553 (-)
LOC118944729 NA coding upstream 84174 247153 ~ 252277 (-)
irx2a irx2 coding upstream 346103 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 714136 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1406813 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1409500 1574364 ~ 1575575 (-)
G214627 NA non-coding downstream 27615 136792 ~ 137029 (-)
G214615 NA non-coding downstream 35438 125848 ~ 129206 (-)
G214614 NA non-coding downstream 38925 125329 ~ 125719 (-)
G214609 NA non-coding downstream 39500 124105 ~ 125144 (-)
G214599 NA non-coding downstream 54299 109354 ~ 110345 (-)
G214690 NA non-coding upstream 42803 207667 ~ 208245 (-)
G214774 NA non-coding upstream 114295 279159 ~ 281422 (-)
G214778 NA non-coding upstream 123193 288057 ~ 288680 (-)
G214783 NA non-coding upstream 129810 294674 ~ 301202 (-)
G214663 NA other upstream 12859 177723 ~ 179591 (-)
G214982 NA other upstream 316183 481047 ~ 481609 (-)
G215354 NA other upstream 751095 915959 ~ 919673 (-)
G215950 NA other upstream 1435362 1600226 ~ 1618140 (-)
G215956 NA other upstream 1494216 1659080 ~ 1682022 (-)

Expression



Co-expression Network