G214663


Basic Information

Item Value
gene id G214663
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 177723 ~ 179591 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244156
CACAAACAGCAGTGTCCCCTCCCTTTCCCACCcatatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagacaaAGTTCTCGTTATTTAGAAagagagtcaatgctgagaccaaggtctatttatttagacagagagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagactaaggtctctttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaatgTCTATATATTTAGGCagagagtcaatgctgagaccaatgtctatttatttagacagggagtcaatgctcagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtgcatTTATTtagtaagggaatacccccctgatttggacaaaaatgaatggcaaaagattggcattggacaaaccatatacacgat
>TU244157
tatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaatgtctctttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaatgTCTATATATTTAGGCagagagtcaatgctgagaccaatgtctatttatttagacagggagtcaatgctcagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtgcatTTATTtagtaagggaatacccccctgatttggacaaaaatgaatggcaaaagattggcattggacaaaccatatacacgat
>TU244160
CACAAACAGCAGTGTCCCCTCCCTTTCCCACCcatatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagacaaAGTTCTCGTTATTTAGAAagagagtcaatgctgagaccaaggtctatttatttagacagagagtcaatgctgagaccaagGTctatttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaaggtctatttatttagacagggagtcaatgctgagaccaatgTCTATATATTTAGGCagagagtcaatgctgagaccaatgtctatttatttagacagggagtcaatgatgagaccaaggtctatttatttagacagggagtcaatgctcagaccaaggtctctttatttagacagggagtcaatgctgagaccaaggtgcatTTATTtagtaagggaatacccccctgatttggacaaaaatgaatggcaaaagattggcattggacaaaccatatacacgat

Function

NR:

description
uncharacterized protein LOC110504120

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244156 False 777 TUCP 0.42 5 177723 179591
TU244157 False 587 TUCP 0.51 3 177723 178387
TU244160 True 738 TUCP 0.41 4 177723 179591

Neighbor

gene id symbol gene type direction distance location
irx4a LOC105016487 coding downstream 22152 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 103170 63916 ~ 74553 (-)
LOC118944729 NA coding upstream 69447 247153 ~ 252277 (-)
irx2a irx2 coding upstream 331376 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 699409 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1392086 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1394773 1574364 ~ 1575575 (-)
G214651 NA non-coding downstream 12859 164644 ~ 164864 (-)
G214627 NA non-coding downstream 40694 136792 ~ 137029 (-)
G214615 NA non-coding downstream 48517 125848 ~ 129206 (-)
G214614 NA non-coding downstream 52004 125329 ~ 125719 (-)
G214609 NA non-coding downstream 52579 124105 ~ 125144 (-)
G214690 NA non-coding upstream 28076 207667 ~ 208245 (-)
G214774 NA non-coding upstream 99568 279159 ~ 281422 (-)
G214778 NA non-coding upstream 108466 288057 ~ 288680 (-)
G214783 NA non-coding upstream 115083 294674 ~ 301202 (-)
G214982 NA other upstream 301456 481047 ~ 481609 (-)
G215354 NA other upstream 736368 915959 ~ 919673 (-)
G215950 NA other upstream 1420635 1600226 ~ 1618140 (-)
G215956 NA other upstream 1479489 1659080 ~ 1682022 (-)
LOC110519742 LOC106595845 other upstream 1482098 1661660 ~ 1673583 (-)

Expression


Co-expression Network