G214690


Basic Information

Item Value
gene id G214690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 207667 ~ 208245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244194
ACCTGGTGGTTTTAATTACATTAGAATCATTTCAGTCTACCTGGTGGTTTTAATTACATTAGAATCATTTCAGTCTACCTGGCTGTTTTAATTACATTAGAATCATTTCAGTCTACCTGGCTATTTGAGTTACATTAGAATAATTTCAATCAACCTTGTTGTTGTAGTTACATTAAGGACAACCTTCCCCGGGGTGGTTTGTGTACAAGGTCACTCCGATCAACATTCCTCCGTCACAAAGCTACAATACAATGTAATTTCCATCCTCATCTGATCCTACCCAGAATGCCCCTCTGGTCAGCAGTAATAGAATGACCTTTTCTCCCATTGCTCTTCAACCTTTCAACAACAACAATCCACCTTGATCTGTTTGTTCACCGTCCATATATAATACTCACTTCCATTGTCATCACTGTCATCCTCCAGtagaacaaagaaaacacaagGATGAGAAAACACAAGGATGAGAAAACACAAGGATGAGAAAACACAAggacctcctcttctctctctccactctctcttcctgtccttgCTGACCGACAGGACAGTAATGTGGATAGGCCCAGGCTATTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244194 True 579 lncRNA 0.41 1 207667 208245

Neighbor

gene id symbol gene type direction distance location
irx4a LOC105016487 coding downstream 52096 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 133114 63916 ~ 74553 (-)
LOC118944729 NA coding upstream 40793 247153 ~ 252277 (-)
irx2a irx2 coding upstream 302722 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 670755 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1363432 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1366119 1574364 ~ 1575575 (-)
G214651 NA non-coding downstream 42803 164644 ~ 164864 (-)
G214627 NA non-coding downstream 70638 136792 ~ 137029 (-)
G214615 NA non-coding downstream 78461 125848 ~ 129206 (-)
G214614 NA non-coding downstream 81948 125329 ~ 125719 (-)
G214609 NA non-coding downstream 82523 124105 ~ 125144 (-)
G214774 NA non-coding upstream 70914 279159 ~ 281422 (-)
G214778 NA non-coding upstream 79812 288057 ~ 288680 (-)
G214783 NA non-coding upstream 86429 294674 ~ 301202 (-)
G214876 NA non-coding upstream 170458 378703 ~ 380379 (-)
G214663 NA other downstream 28076 177723 ~ 179591 (-)
G214982 NA other upstream 272802 481047 ~ 481609 (-)
G215354 NA other upstream 707714 915959 ~ 919673 (-)
G215950 NA other upstream 1391981 1600226 ~ 1618140 (-)
G215956 NA other upstream 1450835 1659080 ~ 1682022 (-)
LOC110519742 LOC106595845 other upstream 1453444 1661660 ~ 1673583 (-)

Expression


Co-expression Network