G214774


Basic Information

Item Value
gene id G214774
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 279159 ~ 281422 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244322
TATTACATACAGCTCTATCTTCTAATCTACATATTACCTACAGCTCTACCTTCTAATCTACAGGATACATAATACCTACAGCTCTACATTCTAATCTACAGGGTACATATTACCTACAGCTCTACCTTCTAATGTAGAGGGTAGATATTACCTACAGCTCTACCTTCTAATCTACAGGGTACGTAATACCTACAGCTCTACCTTCTAATCTACAGGGTATATATTACCTACAGCTCTACCTTCTAATCTACAGGGTACATCTTGCCTACAGCTCTACCTTCTAACGTAGAGGGTAGAAGTTACCTACAGCTCTACCTTCTAATCTACAGGGTACATATTACCTACAGCTCTACCTTCTAATGTAGAGGGTACATAATACCTACAGCTCTACCTTCTAATGTAGAGGGCACATATTACCTACAGCTCTACCTTCTAATCTACAGGGTACATATTGCCTACAGCTCTACCTTCTAATCTACATGGTACATATTACCTACAGCTCTACTTTCTAATTTGCAGGGTACATATTACCTACAGCTCTACCTTCTAATCTACATGGTACATATTACCTACTGCTCTACCTTCTAATGTAGAGGGTACATAATACCTACAGCTCTACCTTCTAATGTAGAGGGCACATATTACCTACAGCTCTACCTTCTAATCTACAGGGTACATAATACCTACAGCTCTACCTTCTAATCTACAGGGTACATAATACCTACAGCTCTACCTTCTAATGTAGAGGGCACATATTACCCACAGCTCTACCTTCTAATCTACAGGGTACATATTGCCTACAGCTCTACCTTCTAATCTACATGGTACATATTACCTACAGCTCTACTTTCTAATTTGCAGGGTACATATTACCTACAGCTCTACCTTCTAATCTACAGGGTACCTGGCTGGAAGCACCATGTCTTCATATTACCTACTGAGGGAATAACATGTGCTTCTACAGTAGGGCTACATGTTATTCCTGAGTGGTTCAGATGTTCAATAGAActgaggggtcactacagacaccctggttcagcggttcAATAGAActgaggggtcactacagacaccctggttcagcggttcAATAGAActgaggggtcactacagacaccctggttcagttTGTATGTAGGTGCATATTCATATTCTAGAGCTTTTAGGGGTTTCTAGTGAGGTTTTATCTCCTCAGACACAGCCCACCTCACAGTGAATATAGAAACAACTTCTCCGGTTTGACAGGGTGTCTTTATATTATAACAACAAAACCCCCCAGCCGATAATTAAATGAGTAAAAAGTGCAGTGGCCTGTGTCCTAAATGAATTGCATTCTATTAGATTACCCCGGTGTAGATAGCTCCAGACTTATTATTAACTATGTCCTACATGTTCCTACATTCAATTATCTTGAACATTATTATTGAAAGTAATCACTCTTCTCCAGAATGGTCCAAATATTCAGTCAAAGTGCATTTTGCTTTGTTAATTAAACTGGTTAAAGTGCAGTGGTCTGCATCCTATTGTGATCAAACCCATCATTTTGAATAGCTATACCACCTTTCTATTAATACAGGCTGAGCAGAGTTTTCAATTCATCCCCTTTAATGCGACATGGTCATTTCTGTTGCTAAAACAAAAGAGAAATGTCGTCTGGAAGAAGAATTGTCTATTACTGTTAATGAAACGAACCAAAGAGCAGCAGGCTGTATCCTCCAAGAACAACTCTGACTAATACATAATAATAGACCGTCTGGGCTGTGGAGTTGTGTGTGAAAACTATTATAACAGGTAATGGAGTTGGGAATGGGGACTTCATCAGACCTGTCGCAGGGAGAATGtcttgtatttttttattaaatgaCTAAGTGCAGCAGTCTGTATCCTATCTCTATTGTATCTATTGGACTGGATTATTTTACATTTTGATTGAAATGATGTCACAGGCAGATAAAAGTGGCTGGACTGTTGTAATGGAATCAGCCGGCGTTGTTTATTCTAGTGATCTACAGTGGTGATGTTCATGTCCCAACACCCAATGCATAAAACATCCACTCACTACTGATTAGATCTGTTTATAATGGCAAAACAAGAGTGTTGCTGTCTGGAGATGGGCAGGCATAAAGATAATACATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244322 True 2138 lncRNA 0.43 3 279159 281422

Neighbor

gene id symbol gene type direction distance location
LOC118944729 NA coding downstream 28611 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 123588 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 204606 63916 ~ 74553 (-)
irx2a irx2 coding upstream 229545 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 597578 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1290255 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1292942 1574364 ~ 1575575 (-)
LOC118944735 LOC106595845 coding upstream 1301694 1583116 ~ 1593615 (-)
G214690 NA non-coding downstream 70914 207667 ~ 208245 (-)
G214651 NA non-coding downstream 114295 164644 ~ 164864 (-)
G214627 NA non-coding downstream 142130 136792 ~ 137029 (-)
G214615 NA non-coding downstream 149953 125848 ~ 129206 (-)
G214778 NA non-coding upstream 6635 288057 ~ 288680 (-)
G214783 NA non-coding upstream 13252 294674 ~ 301202 (-)
G214876 NA non-coding upstream 97281 378703 ~ 380379 (-)
G214890 NA non-coding upstream 118537 399959 ~ 400233 (-)
G214891 NA non-coding upstream 119976 401398 ~ 401650 (-)
G214663 NA other downstream 99568 177723 ~ 179591 (-)
G214982 NA other upstream 199625 481047 ~ 481609 (-)
G215354 NA other upstream 634537 915959 ~ 919673 (-)
G215950 NA other upstream 1318804 1600226 ~ 1618140 (-)
G215956 NA other upstream 1377658 1659080 ~ 1682022 (-)
LOC110519742 LOC106595845 other upstream 1380267 1661660 ~ 1673583 (-)

Expression


Co-expression Network