G214891



Basic Information


Item Value
gene id G214891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 401398 ~ 401650 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU244450
gagttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctctgctgcaggtagacccagggttacctc

Function


NR:

description
PREDICTED: major latex allergen Hev b 5-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU244450 True 253 lncRNA 0.59 1 401398 401650

Neighbor


gene id symbol gene type direction distance location
LOC118944729 NA coding downstream 150850 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 245827 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 326845 63916 ~ 74553 (-)
irx2a irx2 coding upstream 109317 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 477350 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1170027 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1172714 1574364 ~ 1575575 (-)
LOC118944735 LOC106595845 coding upstream 1181466 1583116 ~ 1593615 (-)
G214890 NA non-coding downstream 1165 399959 ~ 400233 (-)
G214876 NA non-coding downstream 21019 378703 ~ 380379 (-)
G214783 NA non-coding downstream 100196 294674 ~ 301202 (-)
G214778 NA non-coding downstream 112718 288057 ~ 288680 (-)
G214774 NA non-coding downstream 119976 279159 ~ 281422 (-)
G214898 NA non-coding upstream 4474 406124 ~ 407996 (-)
G214900 NA non-coding upstream 8245 409895 ~ 414405 (-)
G214917 NA non-coding upstream 23653 425303 ~ 425976 (-)
G214931 NA non-coding upstream 36770 438420 ~ 439632 (-)
G214952 NA non-coding upstream 56682 458332 ~ 458638 (-)
G214663 NA other downstream 221807 177723 ~ 179591 (-)
G214982 NA other upstream 79397 481047 ~ 481609 (-)
G215354 NA other upstream 514309 915959 ~ 919673 (-)
G215950 NA other upstream 1198576 1600226 ~ 1618140 (-)
G215956 NA other upstream 1257430 1659080 ~ 1682022 (-)
LOC110519742 LOC106595845 other upstream 1260039 1661660 ~ 1673583 (-)

Expression



Co-expression Network