G214898


Basic Information

Item Value
gene id G214898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 406124 ~ 407996 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU244465
ttttaatagagccatctctaatccagttttaatagagccacctctaATCCAATTTTAATAGTCACCTCTAATCCCGTTTTAATAGAGCCAACTCTAATCCCGTTTTAATAGAGTCACCTCTTATCCcgttttaatagagccacctctaatcctgttttaatagagccacctctTATCCACTTTTAATAGAGCCAtctctaatccagttttaatccAGCCATCTCTAATCTAGTTTTAATACAGCCACCTCTACTCCCGTTTTAATAGATTCAgctctaatccagttttaatccagccgtctctaatccagttttaatagagccatctctaatccagttttaatagagccaactctaatccagttttaatagagTCATCTCaaatccagttttaatagagccacctctaatccagttttaacTGAGCCAACTCCaatccagttttaatagagccatctctaatccagttttaatagcGCCAACTCaaatccagttttaatagagccctctaatccagttttaatagagccacctctaATCCATTTTTAATCCAGCcacctctaatccagttttaatccagccacctctaatccagttttaatccagccacctctaatccagttttaatccagccacctctaatccagttttaatagagccacctctaatccagttttaatagagccacctctaatccagttttaatagagccacctctaacccagttttaatagagccacctgtaatccagttttaatagagccacctctcatccagttttaatagagccatctccaatccagttttaatagagccacctctaatccagttttaatccAGCCACCTCTAATCCcgttttaatagagccacctctaatccagttttaatagagccacgtctaatccagttttaatccAGCCATCTTTAATCCAGTTTTAATCCAGCCAtctctaatccagttttaatccAGCCACCTCTAATCCCGTTTTAATAGAGCCACTTCTAATCCAATTTAAATCCAGTCATCTGTAATCCAGTTTAAATCTAGTCATCTCTAATCCAGTTTTAAAACAGCcacctctaatccagttttaatagagccacctctaatcccgttttaatagagccatctctaatccagttttaatagagccacctctaatccagttttaaaACAGCCACCTCTAACCCAGTTTTAATCCAGCCAtcaactgtctctctgtgactgtcATCAAGCATGTAGCATGACCTTGTTTCTCCATCTGAAATCAACCCTCCAAATCCACCGACAAAACAAGTTGTTGGCGAGGgccgggaccataccagtatTGAAATACTAGGTATCGTTGCAAGGaaacaaaaaacaaagcagaCATAATTTATTTAGGGAAACAGcactaatgttggaaacaaacatcattatgttgtcatctagagtcacatttatttattttccaagatTTAGAACGCTGTATTTTACATCCATCAGGTTTTTAAAGCACGAAAGAGTGCGGTCTGCTTCGGGTTTTCATTTTTGTCATGGAAAAAAATATTCCAATACTAGTATTGTCCCGGCCATATTGTGTAGTGGGCCATTAATTTAGCCAGTCCCCTATGTGTGGTCTATCTCGGCAGCTCTGTGTTCAGGTAACAGCCAGTCCATTAACCTTTAGTTATAGCTGTGGCTCCATGTCAGCGCCTCCCAGACTTTAATACAGTGTTCTTAATAGTTACTCTGCTGTAATGAAAAGGCCAGAGCAGCCTCTCGACATTGACTTTGCCATTGAAAAAACAAGTTTCCCTTTCTTTCTTTGACCAACAACAATACCCCCCCATCACTACCAcaac

Function

NR:

description
uncharacterized protein LOC110534847

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU244465 True 1847 lncRNA 0.45 2 406124 407996

Neighbor

gene id symbol gene type direction distance location
LOC118944729 NA coding downstream 155576 247153 ~ 252277 (-)
irx4a LOC105016487 coding downstream 250553 147740 ~ 155571 (-)
LOC118964342 NA coding downstream 331571 63916 ~ 74553 (-)
irx2a irx2 coding upstream 102971 510967 ~ 515209 (-)
LOC118964345 NA coding upstream 471004 879000 ~ 881031 (-)
LOC118936608 hacl1 coding upstream 1163681 1571677 ~ 1581702 (-)
LOC118944736 NA coding upstream 1166368 1574364 ~ 1575575 (-)
LOC118944735 LOC106595845 coding upstream 1175120 1583116 ~ 1593615 (-)
G214891 NA non-coding downstream 4474 401398 ~ 401650 (-)
G214890 NA non-coding downstream 5891 399959 ~ 400233 (-)
G214876 NA non-coding downstream 25745 378703 ~ 380379 (-)
G214783 NA non-coding downstream 104922 294674 ~ 301202 (-)
G214778 NA non-coding downstream 117444 288057 ~ 288680 (-)
G214900 NA non-coding upstream 1899 409895 ~ 414405 (-)
G214917 NA non-coding upstream 17307 425303 ~ 425976 (-)
G214931 NA non-coding upstream 30424 438420 ~ 439632 (-)
G214952 NA non-coding upstream 50336 458332 ~ 458638 (-)
G214963 NA non-coding upstream 60100 468096 ~ 468526 (-)
G214663 NA other downstream 226533 177723 ~ 179591 (-)
G214982 NA other upstream 73051 481047 ~ 481609 (-)
G215354 NA other upstream 507963 915959 ~ 919673 (-)
G215950 NA other upstream 1192230 1600226 ~ 1618140 (-)
G215956 NA other upstream 1251084 1659080 ~ 1682022 (-)
LOC110519742 LOC106595845 other upstream 1253693 1661660 ~ 1673583 (-)

Expression


Co-expression Network